RNA–Protein interactions for RNA: ENST00000621948.4

GTF2IP1-208, Transcript of general transcription factor IIi pseudogene 1, humanhuman

TSL 2

Gene GTF2IP1, Length 2,844 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IP1-208ENST00000621948 ZNF608Q9ULD9 1512 aaPredicted RBP13.22□□□□□ -0.29
GTF2IP1-208ENST00000621948 PSEN1P49768 467 aa13.22□□□□□ -0.29
GTF2IP1-208ENST00000621948 SPATA31E1Q6ZUB1 1445 aa13.21□□□□□ -0.29
GTF2IP1-208ENST00000621948 RAPGEF6Q8TEU7 1601 aa13.21□□□□□ -0.29
GTF2IP1-208ENST00000621948 EXOC8Q8IYI6 725 aa13.21□□□□□ -0.3
GTF2IP1-208ENST00000621948 AEBP1Q8IUX7 1158 aa13.19□□□□□ -0.3
GTF2IP1-208ENST00000621948 KIF7Q2M1P5 1343 aa13.19□□□□□ -0.3
GTF2IP1-208ENST00000621948 MRS2Q9HD23 443 aa13.18□□□□□ -0.3
GTF2IP1-208ENST00000621948 BRD1O95696 1058 aa13.18□□□□□ -0.3
GTF2IP1-208ENST00000621948 PZPP20742 1482 aa13.17□□□□□ -0.3
GTF2IP1-208ENST00000621948 GRIN2AQ12879 1464 aa13.17□□□□□ -0.3
GTF2IP1-208ENST00000621948 TROQ12816 1431 aaPredicted RBP13.17□□□□□ -0.3
GTF2IP1-208ENST00000621948 POLR1AO95602 1720 aaPredicted RBP13.17□□□□□ -0.3
GTF2IP1-208ENST00000621948 CFDP1Q9UEE9 299 aaPredicted RBP13.16□□□□□ -0.3
GTF2IP1-208ENST00000621948 PRG4Q92954 1404 aaPredicted RBP13.16□□□□□ -0.3
GTF2IP1-208ENST00000621948 CAMSAP2Q08AD1 1489 aa13.16□□□□□ -0.3
GTF2IP1-208ENST00000621948 SEMA3FQ13275 785 aa13.16□□□□□ -0.3
GTF2IP1-208ENST00000621948 ZBED9Q6R2W3 1325 aa13.15□□□□□ -0.3
GTF2IP1-208ENST00000621948 ANP32BQ92688 251 aaKnown RBP13.15□□□□□ -0.3
GTF2IP1-208ENST00000621948 CC2D1BQ5T0F9 858 aaKnown RBP13.15□□□□□ -0.3
GTF2IP1-208ENST00000621948 EGFL6Q8IUX8 553 aa13.15□□□□□ -0.3
GTF2IP1-208ENST00000621948 CENPJQ9HC77 1338 aaPredicted RBP13.14□□□□□ -0.31
GTF2IP1-208ENST00000621948 GPATCH8Q9UKJ3 1502 aaKnown RBP13.14□□□□□ -0.31
GTF2IP1-208ENST00000621948 PPP4R2Q9NY27 417 aa13.13□□□□□ -0.31
GTF2IP1-208ENST00000621948 ITSN2Q9NZM3 1697 aa13.13□□□□□ -0.31
GTF2IP1-208ENST00000621948 NPM3O75607 178 aaKnown RBP13.12□□□□□ -0.31
GTF2IP1-208ENST00000621948 KIAA1107Q9UPP5 1409 aa13.12□□□□□ -0.31
GTF2IP1-208ENST00000621948 ADGRL2O95490 1459 aa13.12□□□□□ -0.31
GTF2IP1-208ENST00000621948 MBD5Q9P267 1494 aa13.12□□□□□ -0.31
GTF2IP1-208ENST00000621948 ADGBQ8N7X0 1667 aa13.12□□□□□ -0.31
GTF2IP1-208ENST00000621948 IRF6O14896 467 aa13.12□□□□□ -0.31
GTF2IP1-208ENST00000621948 FAM43AQ8N2R8 423 aa13.12□□□□□ -0.31
GTF2IP1-208ENST00000621948 EIF4G3O43432 1585 aaKnown RBP13.12□□□□□ -0.31
GTF2IP1-208ENST00000621948 APBB1O00213 710 aa13.11□□□□□ -0.31
GTF2IP1-208ENST00000621948 MFAP1P55081 439 aaKnown RBP13.11□□□□□ -0.31
GTF2IP1-208ENST00000621948 CARD10Q9BWT7 1032 aa13.11□□□□□ -0.31
GTF2IP1-208ENST00000621948 PLB1Q6P1J6 1458 aa13.11□□□□□ -0.31
GTF2IP1-208ENST00000621948 DNAJC5Q9H3Z4 198 aa13.11□□□□□ -0.31
GTF2IP1-208ENST00000621948 RIPOR2Q9Y4F9 1068 aa13.11□□□□□ -0.31
GTF2IP1-208ENST00000621948 E9PSI1 815 aa13.1□□□□□ -0.31
GTF2IP1-208ENST00000621948 ZNF777Q9ULD5 760 aaPredicted RBP13.1□□□□□ -0.31
GTF2IP1-208ENST00000621948 ADCY10Q96PN6 1610 aa13.1□□□□□ -0.31
GTF2IP1-208ENST00000621948 NGEFQ8N5V2 710 aa13.1□□□□□ -0.31
GTF2IP1-208ENST00000621948 KIF14Q15058 1648 aa13.1□□□□□ -0.31
GTF2IP1-208ENST00000621948 ANKRD30AQ9BXX3 1397 aa13.1□□□□□ -0.31
GTF2IP1-208ENST00000621948 PKD2Q13563 968 aa13.09□□□□□ -0.31
GTF2IP1-208ENST00000621948 DHX29Q7Z478 1369 aaKnown RBP13.09□□□□□ -0.31
GTF2IP1-208ENST00000621948 USP47Q96K76 1375 aa13.09□□□□□ -0.31
GTF2IP1-208ENST00000621948 TTC36A6NLP5 189 aa13.09□□□□□ -0.31
GTF2IP1-208ENST00000621948 NBPF1Q3BBV0 1214 aa13.09□□□□□ -0.31
GTF2IP1-208ENST00000621948 RGL3Q3MIN7 710 aa13.09□□□□□ -0.31
GTF2IP1-208ENST00000621948 SPTY2D1Q68D10 685 aaPredicted RBP13.09□□□□□ -0.31
GTF2IP1-208ENST00000621948 NBPF11Q86T75 865 aa13.09□□□□□ -0.31
GTF2IP1-208ENST00000621948 CROCC2H7BZ55 1655 aa13.09□□□□□ -0.31
GTF2IP1-208ENST00000621948 NBPF20Q3BBV1 942 aa13.08□□□□□ -0.31
GTF2IP1-208ENST00000621948 MAGI1Q96QZ7 1491 aaPredicted RBP13.08□□□□□ -0.32
GTF2IP1-208ENST00000621948 CEP170Q5SW79 1584 aa13.08□□□□□ -0.32
GTF2IP1-208ENST00000621948 CHMP7Q8WUX9 453 aaPredicted RBP13.08□□□□□ -0.32
GTF2IP1-208ENST00000621948 RINLQ6ZS11 566 aa13.07□□□□□ -0.32
GTF2IP1-208ENST00000621948 ANKRD50Q9ULJ7 1429 aa13.07□□□□□ -0.32
GTF2IP1-208ENST00000621948 BCORL1Q5H9F3 1711 aa13.07□□□□□ -0.32
GTF2IP1-208ENST00000621948 ADRA2BP18089 450 aa13.07□□□□□ -0.32
GTF2IP1-208ENST00000621948 SYNJ2O15056 1496 aa13.06□□□□□ -0.32
GTF2IP1-208ENST00000621948 CARMIL2Q6F5E8 1435 aa13.06□□□□□ -0.32
GTF2IP1-208ENST00000621948 ARMCX6Q7L4S7 300 aa13.05□□□□□ -0.32
GTF2IP1-208ENST00000621948 TMCO4Q5TGY1 634 aa13.05□□□□□ -0.32
GTF2IP1-208ENST00000621948 KDM5CP41229 1560 aa13.05□□□□□ -0.32
GTF2IP1-208ENST00000621948 NOL8Q76FK4 1167 aaKnown RBP13.04□□□□□ -0.32
GTF2IP1-208ENST00000621948 UHRF1BP1Q6BDS2 1440 aa13.04□□□□□ -0.32
GTF2IP1-208ENST00000621948 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.04□□□□□ -0.32
GTF2IP1-208ENST00000621948 JPH4Q96JJ6 628 aa13.04□□□□□ -0.32
GTF2IP1-208ENST00000621948 ZHX1Q9UKY1 873 aaPredicted RBP13.04□□□□□ -0.32
GTF2IP1-208ENST00000621948 WASHC2CQ9Y4E1 1318 aa13.04□□□□□ -0.32
GTF2IP1-208ENST00000621948 B4GALNT3Q6L9W6 998 aa13.03□□□□□ -0.32
GTF2IP1-208ENST00000621948 SMG6Q86US8 1419 aaKnown RBP13.03□□□□□ -0.32
GTF2IP1-208ENST00000621948 CCDC125Q86Z20 511 aa13.03□□□□□ -0.32
GTF2IP1-208ENST00000621948 NUP155O75694 1391 aa13.02□□□□□ -0.32
GTF2IP1-208ENST00000621948 RALGAPBQ86X10 1494 aa13.02□□□□□ -0.33
GTF2IP1-208ENST00000621948 SHANK2Q9UPX8 1470 aa13.02□□□□□ -0.33
GTF2IP1-208ENST00000621948 SMARCA5O60264 1052 aaPredicted RBP13.02□□□□□ -0.33
GTF2IP1-208ENST00000621948 NUP160Q12769 1436 aa13.02□□□□□ -0.33
GTF2IP1-208ENST00000621948 ROCK2O75116 1388 aaKnown RBP13.01□□□□□ -0.33
GTF2IP1-208ENST00000621948 C9orf84Q5VXU9 1444 aa13.01□□□□□ -0.33
GTF2IP1-208ENST00000621948 ABCC10Q5T3U5 1492 aa13.01□□□□□ -0.33
GTF2IP1-208ENST00000621948 CDC42BPAQ5VT25 1732 aa13.01□□□□□ -0.33
GTF2IP1-208ENST00000621948 POLD1P28340 1107 aa13.01□□□□□ -0.33
GTF2IP1-208ENST00000621948 TSHZ1Q6ZSZ6 1077 aa13□□□□□ -0.33
GTF2IP1-208ENST00000621948 ARHGEF12Q9NZN5 1544 aa13□□□□□ -0.33
GTF2IP1-208ENST00000621948 CEP120Q8N960 986 aa13□□□□□ -0.33
GTF2IP1-208ENST00000621948 PDCL3Q9H2J4 239 aa13□□□□□ -0.33
GTF2IP1-208ENST00000621948 NUDCQ9Y266 331 aa13□□□□□ -0.33
GTF2IP1-208ENST00000621948 CCDC96Q2M329 555 aa12.99□□□□□ -0.33
GTF2IP1-208ENST00000621948 CARD11Q9BXL7 1154 aa12.99□□□□□ -0.33
GTF2IP1-208ENST00000621948 ABCA8O94911 1581 aa12.99□□□□□ -0.33
GTF2IP1-208ENST00000621948 KDM5DQ9BY66 1539 aa12.99□□□□□ -0.33
GTF2IP1-208ENST00000621948 ATP10BO94823 1461 aa12.99□□□□□ -0.33
GTF2IP1-208ENST00000621948 TSPY4P0CV99 314 aa12.98□□□□□ -0.33
GTF2IP1-208ENST00000621948 TSPY10P0CW01 314 aa12.98□□□□□ -0.33
GTF2IP1-208ENST00000621948 PNISRQ8TF01 805 aaKnown RBP12.98□□□□□ -0.33
GTF2IP1-208ENST00000621948 GZF1Q9H116 711 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms