RNA–Protein interactions for RNA: ENST00000619898.4

SPCS1-206, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPCS1, Length 4,254 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-206ENST00000619898 AFAP1Q8N556 730 aa15.53■□□□□ 0.08
SPCS1-206ENST00000619898 RUNDC1Q96C34 613 aa15.53■□□□□ 0.08
SPCS1-206ENST00000619898 MAGI1Q96QZ7 1491 aaPredicted RBP15.53■□□□□ 0.08
SPCS1-206ENST00000619898 ZNF608Q9ULD9 1512 aaPredicted RBP15.53■□□□□ 0.08
SPCS1-206ENST00000619898 STAC3Q96MF2 364 aa15.53■□□□□ 0.08
SPCS1-206ENST00000619898 SLFN5Q08AF3 891 aa15.52■□□□□ 0.08
SPCS1-206ENST00000619898 RNF123Q5XPI4 1314 aa15.52■□□□□ 0.08
SPCS1-206ENST00000619898 PZPP20742 1482 aa15.51■□□□□ 0.07
SPCS1-206ENST00000619898 GRIN2AQ12879 1464 aa15.51■□□□□ 0.07
SPCS1-206ENST00000619898 SPATA31E1Q6ZUB1 1445 aa15.51■□□□□ 0.07
SPCS1-206ENST00000619898 LMOD2Q6P5Q4 547 aa15.51■□□□□ 0.07
SPCS1-206ENST00000619898 DISP3Q9P2K9 1392 aa15.51■□□□□ 0.07
SPCS1-206ENST00000619898 TCP11L2Q8N4U5 519 aa15.51■□□□□ 0.07
SPCS1-206ENST00000619898 SAMD9Q5K651 1589 aa15.51■□□□□ 0.07
SPCS1-206ENST00000619898 PDE3AQ14432 1141 aa15.51■□□□□ 0.07
SPCS1-206ENST00000619898 WDR62O43379 1518 aa15.5■□□□□ 0.07
SPCS1-206ENST00000619898 DUSP27Q5VZP5 1158 aa15.5■□□□□ 0.07
SPCS1-206ENST00000619898 CASC1Q6TDU7 716 aa15.5■□□□□ 0.07
SPCS1-206ENST00000619898 GBP4Q96PP9 640 aa15.5■□□□□ 0.07
SPCS1-206ENST00000619898 DZIP1LQ8IYY4 767 aaKnown RBP15.49■□□□□ 0.07
SPCS1-206ENST00000619898 FOXD4L1Q9NU39 408 aa15.49■□□□□ 0.07
SPCS1-206ENST00000619898 CCDC141Q6ZP82 1450 aa15.49■□□□□ 0.07
SPCS1-206ENST00000619898 KDM6BO15054 1643 aa15.49■□□□□ 0.07
SPCS1-206ENST00000619898 HDGFL2Q7Z4V5 671 aaPredicted RBP15.49■□□□□ 0.07
SPCS1-206ENST00000619898 PARD3Q8TEW0 1356 aa15.48■□□□□ 0.07
SPCS1-206ENST00000619898 MTHFSP49914 203 aa15.48■□□□□ 0.07
SPCS1-206ENST00000619898 APBB1O00213 710 aa15.47■□□□□ 0.07
SPCS1-206ENST00000619898 LRPPRCP42704 1394 aaKnown RBP15.47■□□□□ 0.07
SPCS1-206ENST00000619898 PDZRN3Q9UPQ7 1066 aa15.46■□□□□ 0.07
SPCS1-206ENST00000619898 TERF2IPQ9NYB0 399 aa15.46■□□□□ 0.07
SPCS1-206ENST00000619898 RAPGEF6Q8TEU7 1601 aa15.46■□□□□ 0.07
SPCS1-206ENST00000619898 GCC2Q8IWJ2 1684 aa15.46■□□□□ 0.07
SPCS1-206ENST00000619898 HAP1P54257 671 aaPredicted RBP15.45■□□□□ 0.06
SPCS1-206ENST00000619898 TMEM132EQ6IEE7 984 aa15.45■□□□□ 0.06
SPCS1-206ENST00000619898 DNMT1P26358 1616 aaKnown RBP15.45■□□□□ 0.06
SPCS1-206ENST00000619898 PLEKHH2Q8IVE3 1493 aa15.45■□□□□ 0.06
SPCS1-206ENST00000619898 SLC12A5Q9H2X9 1139 aa15.44■□□□□ 0.06
SPCS1-206ENST00000619898 DDX19BQ9UMR2 479 aa15.44■□□□□ 0.06
SPCS1-206ENST00000619898 EVC2Q86UK5 1308 aa15.44■□□□□ 0.06
SPCS1-206ENST00000619898 PER1O15534 1290 aaPredicted RBP15.44■□□□□ 0.06
SPCS1-206ENST00000619898 ELL2O00472 640 aaPredicted RBP15.44■□□□□ 0.06
SPCS1-206ENST00000619898 C22orf23Q9BZE7 217 aa15.44■□□□□ 0.06
SPCS1-206ENST00000619898 RSPH6AQ9H0K4 717 aa15.44■□□□□ 0.06
SPCS1-206ENST00000619898 CHMP5Q9NZZ3 219 aa15.44■□□□□ 0.06
SPCS1-206ENST00000619898 KIF14Q15058 1648 aa15.44■□□□□ 0.06
SPCS1-206ENST00000619898 TPRNQ4KMQ1 711 aa15.43■□□□□ 0.06
SPCS1-206ENST00000619898 AAMPQ13685 434 aa15.43■□□□□ 0.06
SPCS1-206ENST00000619898 CYB5RLQ6IPT4 315 aa15.43■□□□□ 0.06
SPCS1-206ENST00000619898 PTMAP06454 111 aaKnown RBP15.42■□□□□ 0.06
SPCS1-206ENST00000619898 ANKRD45Q5TZF3 282 aa15.42■□□□□ 0.06
SPCS1-206ENST00000619898 DDX11L8A8MPP1 907 aa15.42■□□□□ 0.06
SPCS1-206ENST00000619898 TESK2Q96S53 571 aa15.42■□□□□ 0.06
SPCS1-206ENST00000619898 WWC1Q8IX03 1113 aa15.42■□□□□ 0.06
SPCS1-206ENST00000619898 PRAG1Q86YV5 1406 aa15.42■□□□□ 0.06
SPCS1-206ENST00000619898 SOX12O15370 315 aa15.41■□□□□ 0.06
SPCS1-206ENST00000619898 CALD1Q05682 793 aaKnown RBP15.41■□□□□ 0.06
SPCS1-206ENST00000619898 ABCA5Q8WWZ7 1642 aa15.4■□□□□ 0.06
SPCS1-206ENST00000619898 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.4■□□□□ 0.06
SPCS1-206ENST00000619898 LNPKQ9C0E8 428 aa15.4■□□□□ 0.06
SPCS1-206ENST00000619898 RIPK4P57078 832 aa15.4■□□□□ 0.06
SPCS1-206ENST00000619898 GGNBP2Q9H3C7 697 aa15.39■□□□□ 0.05
SPCS1-206ENST00000619898 UHRF1BP1Q6BDS2 1440 aa15.39■□□□□ 0.05
SPCS1-206ENST00000619898 VGFO15240 615 aaPredicted RBP15.39■□□□□ 0.05
SPCS1-206ENST00000619898 MSNP26038 577 aaKnown RBP15.39■□□□□ 0.05
SPCS1-206ENST00000619898 ADAMTS12P58397 1594 aa15.38■□□□□ 0.05
SPCS1-206ENST00000619898 KIAA0556O60303 1618 aa15.38■□□□□ 0.05
SPCS1-206ENST00000619898 HDGFP51858 240 aaKnown RBP15.38■□□□□ 0.05
SPCS1-206ENST00000619898 TSR2Q969E8 191 aaKnown RBP15.38■□□□□ 0.05
SPCS1-206ENST00000619898 MINK1Q8N4C8 1332 aaPredicted RBP15.38■□□□□ 0.05
SPCS1-206ENST00000619898 ITSN2Q9NZM3 1697 aa15.38■□□□□ 0.05
SPCS1-206ENST00000619898 NKTRP30414 1462 aaKnown RBP15.38■□□□□ 0.05
SPCS1-206ENST00000619898 PTMSP20962 102 aa15.37■□□□□ 0.05
SPCS1-206ENST00000619898 ARHGEF12Q9NZN5 1544 aa15.37■□□□□ 0.05
SPCS1-206ENST00000619898 EXOSC9Q06265 439 aaKnown RBP15.37■□□□□ 0.05
SPCS1-206ENST00000619898 AMER1Q5JTC6 1135 aaPredicted RBP15.37■□□□□ 0.05
SPCS1-206ENST00000619898 CABP2Q9NPB3 220 aa15.37■□□□□ 0.05
SPCS1-206ENST00000619898 IGHDP01880 384 aa15.37■□□□□ 0.05
SPCS1-206ENST00000619898 ATP10BO94823 1461 aa15.36■□□□□ 0.05
SPCS1-206ENST00000619898 SCAPERQ9BY12 1400 aa15.36■□□□□ 0.05
SPCS1-206ENST00000619898 KIF21AQ7Z4S6 1674 aa15.36■□□□□ 0.05
SPCS1-206ENST00000619898 PLEKHH1Q9ULM0 1364 aa15.36■□□□□ 0.05
SPCS1-206ENST00000619898 NINLQ9Y2I6 1382 aa15.36■□□□□ 0.05
SPCS1-206ENST00000619898 CFAP44Q96MT7 982 aa15.36■□□□□ 0.05
SPCS1-206ENST00000619898 DIAPH1O60610 1272 aaKnown RBP15.36■□□□□ 0.05
SPCS1-206ENST00000619898 OSCARQ8IYS5 282 aa15.36■□□□□ 0.05
SPCS1-206ENST00000619898 C8orf34Q49A92 452 aa15.35■□□□□ 0.05
SPCS1-206ENST00000619898 DNTTIP2Q5QJE6 756 aaKnown RBP15.35■□□□□ 0.05
SPCS1-206ENST00000619898 DISP1Q96F81 1524 aa15.35■□□□□ 0.05
SPCS1-206ENST00000619898 WDR63Q8IWG1 891 aa15.35■□□□□ 0.05
SPCS1-206ENST00000619898 DENND4BO75064 1496 aaPredicted RBP15.34■□□□□ 0.05
SPCS1-206ENST00000619898 RARSP54136 660 aaKnown RBP15.34■□□□□ 0.05
SPCS1-206ENST00000619898 KIF16BQ96L93 1317 aa15.34■□□□□ 0.05
SPCS1-206ENST00000619898 TRAK2O60296 914 aa15.33■□□□□ 0.05
SPCS1-206ENST00000619898 FAM135AQ9P2D6 1515 aa15.33■□□□□ 0.05
SPCS1-206ENST00000619898 KDM5BQ9UGL1 1544 aa15.33■□□□□ 0.05
SPCS1-206ENST00000619898 MVPQ14764 893 aaKnown RBP15.33■□□□□ 0.04
SPCS1-206ENST00000619898 DDX49Q9Y6V7 483 aaKnown RBP15.33■□□□□ 0.04
SPCS1-206ENST00000619898 ADGRL2O95490 1459 aa15.32■□□□□ 0.04
SPCS1-206ENST00000619898 FAM43AQ8N2R8 423 aa15.32■□□□□ 0.04
SPCS1-206ENST00000619898 PLCB2Q00722 1185 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms