RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 ROBO1Q9Y6N7 1651 aa11.97□□□□□ -0.49
SCAMP1-206ENST00000618166 XIRP1Q702N8 1843 aaKnown RBP11.97□□□□□ -0.49
SCAMP1-206ENST00000618166 DEPDC5O75140 1603 aa11.95□□□□□ -0.5
SCAMP1-206ENST00000618166 RXRBP28702 533 aa11.95□□□□□ -0.5
SCAMP1-206ENST00000618166 SGIP1Q9BQI5 828 aa11.95□□□□□ -0.5
SCAMP1-206ENST00000618166 TNRQ92752 1358 aa11.95□□□□□ -0.5
SCAMP1-206ENST00000618166 PLEKHG5O94827 1062 aa11.94□□□□□ -0.5
SCAMP1-206ENST00000618166 ZNF772Q68DY9 489 aaPredicted RBP11.94□□□□□ -0.5
SCAMP1-206ENST00000618166 RBM33Q96EV2 1170 aaKnown RBP11.93□□□□□ -0.5
SCAMP1-206ENST00000618166 TRIM35Q9UPQ4 493 aa11.93□□□□□ -0.5
SCAMP1-206ENST00000618166 JCADQ9P266 1359 aa11.93□□□□□ -0.5
SCAMP1-206ENST00000618166 CDC42BPBQ9Y5S2 1711 aa11.93□□□□□ -0.5
SCAMP1-206ENST00000618166 MIER1Q8N108 512 aa11.92□□□□□ -0.5
SCAMP1-206ENST00000618166 PLXNC1O60486 1568 aa11.92□□□□□ -0.5
SCAMP1-206ENST00000618166 SAMD9LQ8IVG5 1584 aa11.92□□□□□ -0.5
SCAMP1-206ENST00000618166 MMRN1Q13201 1228 aa11.92□□□□□ -0.5
SCAMP1-206ENST00000618166 MEX3CQ5U5Q3 659 aaKnown RBP11.92□□□□□ -0.5
SCAMP1-206ENST00000618166 RGS12O14924 1447 aa11.91□□□□□ -0.5
SCAMP1-206ENST00000618166 ST18O60284 1047 aa11.91□□□□□ -0.5
SCAMP1-206ENST00000618166 THEMISQ8N1K5 641 aaPredicted RBP11.91□□□□□ -0.5
SCAMP1-206ENST00000618166 EHMT2Q96KQ7 1210 aa11.91□□□□□ -0.5
SCAMP1-206ENST00000618166 CDK12Q9NYV4 1490 aaPredicted RBP11.9□□□□□ -0.5
SCAMP1-206ENST00000618166 UGGT1Q9NYU2 1555 aa11.9□□□□□ -0.5
SCAMP1-206ENST00000618166 ZC3H13Q5T200 1668 aaKnown RBP11.89□□□□□ -0.51
SCAMP1-206ENST00000618166 PHLPP1O60346 1717 aa11.89□□□□□ -0.51
SCAMP1-206ENST00000618166 IFFO2Q5TF58 517 aa11.89□□□□□ -0.51
SCAMP1-206ENST00000618166 SLAIN1Q8ND83 568 aa11.89□□□□□ -0.51
SCAMP1-206ENST00000618166 A2MP01023 1474 aa11.88□□□□□ -0.51
SCAMP1-206ENST00000618166 ATP1B4Q9UN42 357 aaPredicted RBP11.88□□□□□ -0.51
SCAMP1-206ENST00000618166 PCDHB13Q9Y5F0 798 aa11.88□□□□□ -0.51
SCAMP1-206ENST00000618166 FAM135AQ9P2D6 1515 aa11.88□□□□□ -0.51
SCAMP1-206ENST00000618166 NUTM2BA6NNL0 878 aaPredicted RBP11.87□□□□□ -0.51
SCAMP1-206ENST00000618166 NUTM2EB1AL46 878 aaPredicted RBP11.87□□□□□ -0.51
SCAMP1-206ENST00000618166 NUTM2DQ5VT03 806 aaPredicted RBP11.87□□□□□ -0.51
SCAMP1-206ENST00000618166 NUTM2AQ8IVF1 878 aaPredicted RBP11.87□□□□□ -0.51
SCAMP1-206ENST00000618166 SPAG9O60271 1321 aaKnown RBP11.87□□□□□ -0.51
SCAMP1-206ENST00000618166 TMEM94Q12767 1356 aa11.87□□□□□ -0.51
SCAMP1-206ENST00000618166 TROQ12816 1431 aaPredicted RBP11.86□□□□□ -0.51
SCAMP1-206ENST00000618166 COL16A1Q07092 1604 aaPredicted RBP11.85□□□□□ -0.51
SCAMP1-206ENST00000618166 PREX2Q70Z35 1606 aa11.85□□□□□ -0.51
SCAMP1-206ENST00000618166 PZPP20742 1482 aa11.85□□□□□ -0.51
SCAMP1-206ENST00000618166 ATP7AQ04656 1500 aa11.85□□□□□ -0.51
SCAMP1-206ENST00000618166 MAP3K1Q13233 1512 aa11.85□□□□□ -0.51
SCAMP1-206ENST00000618166 MIA2Q96PC5 1412 aa11.84□□□□□ -0.51
SCAMP1-206ENST00000618166 EP400Q96L91 3159 aa11.83□□□□□ -0.52
SCAMP1-206ENST00000618166 SPATA31A6Q5VVP1 1343 aa11.83□□□□□ -0.52
SCAMP1-206ENST00000618166 NLRP1Q9C000 1473 aa11.83□□□□□ -0.52
SCAMP1-206ENST00000618166 SYCP2Q9BX26 1530 aa11.83□□□□□ -0.52
SCAMP1-206ENST00000618166 HNRNPMP52272 730 aaKnown RBP eCLIP11.82□□□□□ -0.52
SCAMP1-206ENST00000618166 KDM5DQ9BY66 1539 aa11.82□□□□□ -0.52
SCAMP1-206ENST00000618166 INO80Q9ULG1 1556 aaPredicted RBP11.82□□□□□ -0.52
SCAMP1-206ENST00000618166 AFF2P51816 1311 aa11.81□□□□□ -0.52
SCAMP1-206ENST00000618166 ZNF777Q9ULD5 760 aaPredicted RBP11.81□□□□□ -0.52
SCAMP1-206ENST00000618166 IFNL1Q8IU54 200 aa11.8□□□□□ -0.52
SCAMP1-206ENST00000618166 LRRC9Q6ZRR7 1453 aa11.8□□□□□ -0.52
SCAMP1-206ENST00000618166 LTKP29376 864 aa11.79□□□□□ -0.52
SCAMP1-206ENST00000618166 CDK11AQ9UQ88 783 aaPredicted RBP11.79□□□□□ -0.52
SCAMP1-206ENST00000618166 CLIP1P30622 1438 aa11.79□□□□□ -0.52
SCAMP1-206ENST00000618166 PLCG2P16885 1265 aa11.79□□□□□ -0.52
SCAMP1-206ENST00000618166 NUBP1P53384 320 aa11.79□□□□□ -0.52
SCAMP1-206ENST00000618166 SPNS2Q8IVW8 549 aa11.79□□□□□ -0.52
SCAMP1-206ENST00000618166 SLAIN2Q9P270 581 aa11.79□□□□□ -0.52
SCAMP1-206ENST00000618166 ATAD2Q6PL18 1390 aa11.78□□□□□ -0.52
SCAMP1-206ENST00000618166 TMEM106CQ9BVX2 250 aa11.78□□□□□ -0.52
SCAMP1-206ENST00000618166 SCAF11Q99590 1463 aaKnown RBP11.77□□□□□ -0.52
SCAMP1-206ENST00000618166 LRP5O75197 1615 aa11.77□□□□□ -0.52
SCAMP1-206ENST00000618166 IRX5P78411 483 aaPredicted RBP11.77□□□□□ -0.53
SCAMP1-206ENST00000618166 FGD6Q6ZV73 1430 aa11.76□□□□□ -0.53
SCAMP1-206ENST00000618166 RBM6P78332 1123 aaKnown RBP11.76□□□□□ -0.53
SCAMP1-206ENST00000618166 TMEM121BQ9BXQ6 578 aaPredicted RBP11.76□□□□□ -0.53
SCAMP1-206ENST00000618166 QTRT2Q9H974 415 aaKnown RBP11.76□□□□□ -0.53
SCAMP1-206ENST00000618166 PROSER2Q86WR7 435 aaPredicted RBP11.75□□□□□ -0.53
SCAMP1-206ENST00000618166 PLCD3Q8N3E9 789 aa11.75□□□□□ -0.53
SCAMP1-206ENST00000618166 CDC42BPAQ5VT25 1732 aa11.75□□□□□ -0.53
SCAMP1-206ENST00000618166 SHPRHQ149N8 1683 aa11.75□□□□□ -0.53
SCAMP1-206ENST00000618166 LRRIQ1Q96JM4 1722 aa11.74□□□□□ -0.53
SCAMP1-206ENST00000618166 WASHC2CQ9Y4E1 1318 aa11.73□□□□□ -0.53
SCAMP1-206ENST00000618166 TIAM1Q13009 1591 aa11.73□□□□□ -0.53
SCAMP1-206ENST00000618166 YY1P25490 414 aa11.73□□□□□ -0.53
SCAMP1-206ENST00000618166 TXNDC2Q86VQ3 553 aa11.73□□□□□ -0.53
SCAMP1-206ENST00000618166 ZBTB47Q9UFB7 747 aaPredicted RBP11.73□□□□□ -0.53
SCAMP1-206ENST00000618166 NCOA2Q15596 1464 aa11.73□□□□□ -0.53
SCAMP1-206ENST00000618166 C8orf37Q96NL8 207 aa11.72□□□□□ -0.53
SCAMP1-206ENST00000618166 ADGBQ8N7X0 1667 aa11.72□□□□□ -0.53
SCAMP1-206ENST00000618166 PRDM15P57071 1507 aaPredicted RBP11.71□□□□□ -0.53
SCAMP1-206ENST00000618166 KIF3BO15066 747 aa11.71□□□□□ -0.53
SCAMP1-206ENST00000618166 MSH6P52701 1360 aa11.71□□□□□ -0.53
SCAMP1-206ENST00000618166 UBR1Q8IWV7 1749 aa11.71□□□□□ -0.54
SCAMP1-206ENST00000618166 DIP2AQ14689 1571 aa11.7□□□□□ -0.54
SCAMP1-206ENST00000618166 ARHGAP23Q9P227 1491 aa11.7□□□□□ -0.54
SCAMP1-206ENST00000618166 KCNA6P17658 529 aa11.7□□□□□ -0.54
SCAMP1-206ENST00000618166 SNPHO15079 494 aa11.69□□□□□ -0.54
SCAMP1-206ENST00000618166 OCEL1Q9H607 264 aa11.69□□□□□ -0.54
SCAMP1-206ENST00000618166 DHX29Q7Z478 1369 aaKnown RBP11.69□□□□□ -0.54
SCAMP1-206ENST00000618166 AHDC1Q5TGY3 1603 aaPredicted RBP11.68□□□□□ -0.54
SCAMP1-206ENST00000618166 SLIT1O75093 1534 aa11.68□□□□□ -0.54
SCAMP1-206ENST00000618166 PSDA5PKW4 1024 aaPredicted RBP11.67□□□□□ -0.54
SCAMP1-206ENST00000618166 FAM212AQ96EL1 285 aa11.67□□□□□ -0.54
SCAMP1-206ENST00000618166 SLC26A8Q96RN1 970 aa11.67□□□□□ -0.54
SCAMP1-206ENST00000618166 GPATCH8Q9UKJ3 1502 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms