RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 ANKLE2Q86XL3 938 aa12.79□□□□□ -0.36
SMARCA1-205ENST00000617310 RWDD1Q9H446 243 aaPredicted RBP12.79□□□□□ -0.36
SMARCA1-205ENST00000617310 SLC52A1Q9NWF4 448 aa12.79□□□□□ -0.36
SMARCA1-205ENST00000617310 ZNF428Q96B54 188 aa12.78□□□□□ -0.36
SMARCA1-205ENST00000617310 GRIN2AQ12879 1464 aa12.78□□□□□ -0.36
SMARCA1-205ENST00000617310 COG6Q9Y2V7 657 aa12.78□□□□□ -0.36
SMARCA1-205ENST00000617310 EPRSP07814 1512 aaKnown RBP12.78□□□□□ -0.36
SMARCA1-205ENST00000617310 KLHL34Q8N239 644 aa12.77□□□□□ -0.36
SMARCA1-205ENST00000617310 PLCB2Q00722 1185 aa12.77□□□□□ -0.37
SMARCA1-205ENST00000617310 TMX4Q9H1E5 349 aaPredicted RBP12.77□□□□□ -0.37
SMARCA1-205ENST00000617310 WASHC2AQ641Q2 1341 aa12.77□□□□□ -0.37
SMARCA1-205ENST00000617310 G3V3G9 751 aa12.76□□□□□ -0.37
SMARCA1-205ENST00000617310 ZRSR1Q15695 479 aaKnown RBP12.76□□□□□ -0.37
SMARCA1-205ENST00000617310 DCAF8Q5TAQ9 597 aa12.76□□□□□ -0.37
SMARCA1-205ENST00000617310 KIAA1211Q6ZU35 1233 aa12.76□□□□□ -0.37
SMARCA1-205ENST00000617310 CCDC7Q96M83 1385 aa12.76□□□□□ -0.37
SMARCA1-205ENST00000617310 WAPLQ7Z5K2 1190 aa12.76□□□□□ -0.37
SMARCA1-205ENST00000617310 CDK19Q9BWU1 502 aa12.75□□□□□ -0.37
SMARCA1-205ENST00000617310 NOL8Q76FK4 1167 aaKnown RBP12.75□□□□□ -0.37
SMARCA1-205ENST00000617310 CHMP4AQ9BY43 222 aa12.75□□□□□ -0.37
SMARCA1-205ENST00000617310 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.75□□□□□ -0.37
SMARCA1-205ENST00000617310 AIMP1Q12904 312 aaKnown RBP12.75□□□□□ -0.37
SMARCA1-205ENST00000617310 EIF5BO60841 1220 aaKnown RBP12.74□□□□□ -0.37
SMARCA1-205ENST00000617310 EFCAB5A4FU69 1503 aa12.74□□□□□ -0.37
SMARCA1-205ENST00000617310 MFAP1P55081 439 aaKnown RBP12.74□□□□□ -0.37
SMARCA1-205ENST00000617310 HMMRO75330 724 aa12.74□□□□□ -0.37
SMARCA1-205ENST00000617310 ZC3H6P61129 1189 aaKnown RBP12.74□□□□□ -0.37
SMARCA1-205ENST00000617310 FKBP5Q13451 457 aaPredicted RBP12.74□□□□□ -0.37
SMARCA1-205ENST00000617310 GPRASP1Q5JY77 1395 aa12.73□□□□□ -0.37
SMARCA1-205ENST00000617310 IQGAP2Q13576 1575 aa12.73□□□□□ -0.37
SMARCA1-205ENST00000617310 TSPYL4Q9UJ04 414 aa12.73□□□□□ -0.37
SMARCA1-205ENST00000617310 ADAMTS8Q9UP79 889 aa12.73□□□□□ -0.37
SMARCA1-205ENST00000617310 FAM177BA6PVY3 158 aa12.72□□□□□ -0.37
SMARCA1-205ENST00000617310 PDE3BQ13370 1112 aa12.72□□□□□ -0.37
SMARCA1-205ENST00000617310 MAGI1Q96QZ7 1491 aaPredicted RBP12.72□□□□□ -0.37
SMARCA1-205ENST00000617310 MIA2Q96PC5 1412 aa12.72□□□□□ -0.37
SMARCA1-205ENST00000617310 IDI1Q13907 227 aa12.72□□□□□ -0.37
SMARCA1-205ENST00000617310 STAC3Q96MF2 364 aa12.72□□□□□ -0.37
SMARCA1-205ENST00000617310 TOMM22Q9NS69 142 aa12.72□□□□□ -0.37
SMARCA1-205ENST00000617310 DAPK1P53355 1430 aa12.72□□□□□ -0.37
SMARCA1-205ENST00000617310 RRBP1Q9P2E9 1410 aaKnown RBP12.72□□□□□ -0.37
SMARCA1-205ENST00000617310 SLKQ9H2G2 1235 aaPredicted RBP12.72□□□□□ -0.37
SMARCA1-205ENST00000617310 C9orf78Q9NZ63 289 aaPredicted RBP12.72□□□□□ -0.37
SMARCA1-205ENST00000617310 EXOC6Q8TAG9 804 aa12.71□□□□□ -0.37
SMARCA1-205ENST00000617310 HSCBQ8IWL3 235 aa12.71□□□□□ -0.37
SMARCA1-205ENST00000617310 E9PSI1 815 aa12.71□□□□□ -0.38
SMARCA1-205ENST00000617310 MCCP23508 829 aa12.71□□□□□ -0.38
SMARCA1-205ENST00000617310 KIAA1107Q9UPP5 1409 aa12.71□□□□□ -0.38
SMARCA1-205ENST00000617310 PRKAR2BP31323 418 aa12.71□□□□□ -0.38
SMARCA1-205ENST00000617310 RRS1Q15050 365 aaKnown RBP12.71□□□□□ -0.38
SMARCA1-205ENST00000617310 DDX54Q8TDD1 881 aaKnown RBP12.7□□□□□ -0.38
SMARCA1-205ENST00000617310 PRDM11Q9NQV5 511 aa12.7□□□□□ -0.38
SMARCA1-205ENST00000617310 ERBINQ96RT1 1412 aa12.7□□□□□ -0.38
SMARCA1-205ENST00000617310 EHBP1L1Q8N3D4 1523 aa12.7□□□□□ -0.38
SMARCA1-205ENST00000617310 CDK11BP21127 795 aaKnown RBP12.7□□□□□ -0.38
SMARCA1-205ENST00000617310 NEXNQ0ZGT2 675 aa12.7□□□□□ -0.38
SMARCA1-205ENST00000617310 ZKSCAN2Q63HK3 967 aa12.7□□□□□ -0.38
SMARCA1-205ENST00000617310 PLEKHH2Q8IVE3 1493 aa12.69□□□□□ -0.38
SMARCA1-205ENST00000617310 ANKRD45Q5TZF3 282 aa12.69□□□□□ -0.38
SMARCA1-205ENST00000617310 TCP11L2Q8N4U5 519 aa12.69□□□□□ -0.38
SMARCA1-205ENST00000617310 FOXO3O43524 673 aa12.68□□□□□ -0.38
SMARCA1-205ENST00000617310 SULT6B1Q6IMI4 303 aa12.68□□□□□ -0.38
SMARCA1-205ENST00000617310 RUNDC1Q96C34 613 aa12.68□□□□□ -0.38
SMARCA1-205ENST00000617310 CRBNQ96SW2 442 aa12.68□□□□□ -0.38
SMARCA1-205ENST00000617310 ADGRL1O94910 1474 aa12.68□□□□□ -0.38
SMARCA1-205ENST00000617310 THOC2Q8NI27 1593 aaKnown RBP12.68□□□□□ -0.38
SMARCA1-205ENST00000617310 TARBP1Q13395 1621 aaKnown RBP12.68□□□□□ -0.38
SMARCA1-205ENST00000617310 GOLGA6L4A6NEF3 574 aa12.68□□□□□ -0.38
SMARCA1-205ENST00000617310 CDCA7LQ96GN5 454 aa12.68□□□□□ -0.38
SMARCA1-205ENST00000617310 FOXD4L1Q9NU39 408 aa12.68□□□□□ -0.38
SMARCA1-205ENST00000617310 TIAM1Q13009 1591 aa12.68□□□□□ -0.38
SMARCA1-205ENST00000617310 HFM1A2PYH4 1435 aa12.68□□□□□ -0.38
SMARCA1-205ENST00000617310 TOM1L2Q6ZVM7 507 aa12.68□□□□□ -0.38
SMARCA1-205ENST00000617310 RILPL2Q969X0 211 aa12.68□□□□□ -0.38
SMARCA1-205ENST00000617310 POGZQ7Z3K3 1410 aa12.67□□□□□ -0.38
SMARCA1-205ENST00000617310 HDAC5Q9UQL6 1122 aa12.67□□□□□ -0.38
SMARCA1-205ENST00000617310 RBM42Q9BTD8 480 aaKnown RBP12.67□□□□□ -0.38
SMARCA1-205ENST00000617310 HECW1Q76N89 1606 aa12.67□□□□□ -0.38
SMARCA1-205ENST00000617310 ABCA5Q8WWZ7 1642 aa12.66□□□□□ -0.38
SMARCA1-205ENST00000617310 NAIPQ13075 1403 aa12.66□□□□□ -0.38
SMARCA1-205ENST00000617310 PTMAP06454 111 aaKnown RBP12.66□□□□□ -0.38
SMARCA1-205ENST00000617310 PPP2R1AP30153 589 aa12.65□□□□□ -0.38
SMARCA1-205ENST00000617310 GNL2Q13823 731 aaKnown RBP12.65□□□□□ -0.38
SMARCA1-205ENST00000617310 GPATCH3Q96I76 525 aa12.65□□□□□ -0.39
SMARCA1-205ENST00000617310 RTEL1-TNFRSF6BF6WH68 1400 aa12.64□□□□□ -0.39
SMARCA1-205ENST00000617310 NOP58Q9Y2X3 529 aaKnown RBP12.64□□□□□ -0.39
SMARCA1-205ENST00000617310 ADGRF5Q8IZF2 1346 aa12.64□□□□□ -0.39
SMARCA1-205ENST00000617310 NUDT16Q96DE0 195 aaKnown RBP12.64□□□□□ -0.39
SMARCA1-205ENST00000617310 RRP1P56182 461 aaKnown RBP12.63□□□□□ -0.39
SMARCA1-205ENST00000617310 TSR2Q969E8 191 aaKnown RBP12.63□□□□□ -0.39
SMARCA1-205ENST00000617310 RBM19Q9Y4C8 960 aaKnown RBP12.63□□□□□ -0.39
SMARCA1-205ENST00000617310 CCDC61Q9Y6R9 512 aa12.63□□□□□ -0.39
SMARCA1-205ENST00000617310 CCDC141Q6ZP82 1450 aa12.63□□□□□ -0.39
SMARCA1-205ENST00000617310 ADAMTS2O95450 1211 aa12.63□□□□□ -0.39
SMARCA1-205ENST00000617310 PANK1Q8TE04 598 aa12.63□□□□□ -0.39
SMARCA1-205ENST00000617310 ZBED9Q6R2W3 1325 aa12.63□□□□□ -0.39
SMARCA1-205ENST00000617310 PCF11O94913 1555 aaKnown RBP12.63□□□□□ -0.39
SMARCA1-205ENST00000617310 RIC3Q7Z5B4 369 aa12.62□□□□□ -0.39
SMARCA1-205ENST00000617310 TRIM44Q96DX7 344 aaPredicted RBP12.62□□□□□ -0.39
SMARCA1-205ENST00000617310 AMOTL2Q9Y2J4 779 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms