RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 BACH2Q9BYV9 841 aa13□□□□□ -0.33
CLTCL1-209ENST00000617103 TPD52L1Q16890 204 aaPredicted RBP13□□□□□ -0.33
CLTCL1-209ENST00000617103 LNPKQ9C0E8 428 aa13□□□□□ -0.33
CLTCL1-209ENST00000617103 ARGLU1Q9NWB6 273 aaPredicted RBP13□□□□□ -0.33
CLTCL1-209ENST00000617103 IFT57Q9NWB7 429 aa13□□□□□ -0.33
CLTCL1-209ENST00000617103 BICD2Q8TD16 824 aa12.99□□□□□ -0.33
CLTCL1-209ENST00000617103 BRD4O60885 1362 aaPredicted RBP12.99□□□□□ -0.33
CLTCL1-209ENST00000617103 TAF7LQ5H9L4 462 aa12.99□□□□□ -0.33
CLTCL1-209ENST00000617103 ANO2Q9NQ90 1003 aa12.99□□□□□ -0.33
CLTCL1-209ENST00000617103 WASHC2AQ641Q2 1341 aa12.98□□□□□ -0.33
CLTCL1-209ENST00000617103 PES1O00541 588 aaKnown RBP12.98□□□□□ -0.33
CLTCL1-209ENST00000617103 HMGN5P82970 282 aaKnown RBP12.98□□□□□ -0.33
CLTCL1-209ENST00000617103 CCDC173Q0VFZ6 552 aa12.98□□□□□ -0.33
CLTCL1-209ENST00000617103 TDRD9Q8NDG6 1382 aaKnown RBP12.98□□□□□ -0.33
CLTCL1-209ENST00000617103 SASS6Q6UVJ0 657 aa12.97□□□□□ -0.33
CLTCL1-209ENST00000617103 SMC3Q9UQE7 1217 aa12.97□□□□□ -0.33
CLTCL1-209ENST00000617103 RUSC2Q8N2Y8 1516 aa12.97□□□□□ -0.33
CLTCL1-209ENST00000617103 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.97□□□□□ -0.33
CLTCL1-209ENST00000617103 RUNDC1Q96C34 613 aa12.97□□□□□ -0.33
CLTCL1-209ENST00000617103 TOP2AP11388 1531 aaKnown RBP12.97□□□□□ -0.33
CLTCL1-209ENST00000617103 MBD3O95983 291 aa12.97□□□□□ -0.33
CLTCL1-209ENST00000617103 PANK1Q8TE04 598 aa12.97□□□□□ -0.33
CLTCL1-209ENST00000617103 MLECQ14165 292 aa12.97□□□□□ -0.33
CLTCL1-209ENST00000617103 ZNF330Q9Y3S2 320 aaPredicted RBP12.97□□□□□ -0.33
CLTCL1-209ENST00000617103 RNF214Q8ND24 703 aa12.96□□□□□ -0.33
CLTCL1-209ENST00000617103 VPS37CA5D8V6 355 aaPredicted RBP12.96□□□□□ -0.33
CLTCL1-209ENST00000617103 CPLX2Q6PUV4 134 aaKnown RBP12.96□□□□□ -0.33
CLTCL1-209ENST00000617103 MNS1Q8NEH6 495 aa12.96□□□□□ -0.33
CLTCL1-209ENST00000617103 TOMM22Q9NS69 142 aa12.96□□□□□ -0.33
CLTCL1-209ENST00000617103 ROCK1Q13464 1354 aa12.96□□□□□ -0.34
CLTCL1-209ENST00000617103 CDC45O75419 566 aa12.95□□□□□ -0.34
CLTCL1-209ENST00000617103 UACAQ9BZF9 1416 aa12.95□□□□□ -0.34
CLTCL1-209ENST00000617103 IPO7O95373 1038 aaKnown RBP12.95□□□□□ -0.34
CLTCL1-209ENST00000617103 AMPHP49418 695 aa12.95□□□□□ -0.34
CLTCL1-209ENST00000617103 CAVIN1Q6NZI2 390 aaKnown RBP12.95□□□□□ -0.34
CLTCL1-209ENST00000617103 CCDC66A2RUB6 948 aa12.95□□□□□ -0.34
CLTCL1-209ENST00000617103 NOM1Q5C9Z4 860 aaKnown RBP12.95□□□□□ -0.34
CLTCL1-209ENST00000617103 CEP89Q96ST8 783 aa12.94□□□□□ -0.34
CLTCL1-209ENST00000617103 RIPK4P57078 832 aa12.94□□□□□ -0.34
CLTCL1-209ENST00000617103 RNF20Q5VTR2 975 aa12.94□□□□□ -0.34
CLTCL1-209ENST00000617103 RRP9O43818 475 aaKnown RBP12.94□□□□□ -0.34
CLTCL1-209ENST00000617103 EVC2Q86UK5 1308 aa12.93□□□□□ -0.34
CLTCL1-209ENST00000617103 CDCA7LQ96GN5 454 aa12.93□□□□□ -0.34
CLTCL1-209ENST00000617103 CSB-PGBD3P0DP91 1061 aa12.93□□□□□ -0.34
CLTCL1-209ENST00000617103 PRKCSHP14314 528 aaPredicted RBP12.93□□□□□ -0.34
CLTCL1-209ENST00000617103 ACBD3Q9H3P7 528 aa12.93□□□□□ -0.34
CLTCL1-209ENST00000617103 CCDC73Q6ZRK6 1079 aa12.93□□□□□ -0.34
CLTCL1-209ENST00000617103 DIAPH1O60610 1272 aaKnown RBP12.92□□□□□ -0.34
CLTCL1-209ENST00000617103 LETM1O95202 739 aaPredicted RBP12.92□□□□□ -0.34
CLTCL1-209ENST00000617103 SMARCA2P51531 1590 aa12.92□□□□□ -0.34
CLTCL1-209ENST00000617103 RBM10P98175 930 aaKnown RBP12.92□□□□□ -0.34
CLTCL1-209ENST00000617103 HSP90B2PQ58FF3 399 aa12.92□□□□□ -0.34
CLTCL1-209ENST00000617103 ANKRD20A12PQ8NF67 263 aa12.92□□□□□ -0.34
CLTCL1-209ENST00000617103 ADAMTS8Q9UP79 889 aa12.92□□□□□ -0.34
CLTCL1-209ENST00000617103 WIZO95785 1651 aa12.92□□□□□ -0.34
CLTCL1-209ENST00000617103 PDE3AQ14432 1141 aa12.91□□□□□ -0.34
CLTCL1-209ENST00000617103 LRRFIP1Q32MZ4 808 aaKnown RBP12.91□□□□□ -0.34
CLTCL1-209ENST00000617103 GRPEL1Q9HAV7 217 aa12.91□□□□□ -0.34
CLTCL1-209ENST00000617103 HOOK1Q9UJC3 728 aaKnown RBP12.91□□□□□ -0.34
CLTCL1-209ENST00000617103 ESPNB1AK53 854 aa12.91□□□□□ -0.34
CLTCL1-209ENST00000617103 AKAP17AQ02040 695 aaKnown RBP12.9□□□□□ -0.34
CLTCL1-209ENST00000617103 PDZRN3Q9UPQ7 1066 aa12.9□□□□□ -0.34
CLTCL1-209ENST00000617103 AKNAQ7Z591 1439 aa12.9□□□□□ -0.34
CLTCL1-209ENST00000617103 CPLX1O14810 134 aa12.9□□□□□ -0.34
CLTCL1-209ENST00000617103 NUTM2DQ5VT03 806 aaPredicted RBP12.9□□□□□ -0.34
CLTCL1-209ENST00000617103 NGDNQ8NEJ9 315 aaKnown RBP12.9□□□□□ -0.34
CLTCL1-209ENST00000617103 TSPY26PQ9H489 355 aa12.9□□□□□ -0.34
CLTCL1-209ENST00000617103 MIA2Q96PC5 1412 aa12.9□□□□□ -0.34
CLTCL1-209ENST00000617103 IFIT2P09913 472 aaKnown RBP12.9□□□□□ -0.34
CLTCL1-209ENST00000617103 TRIM29Q14134 588 aa12.9□□□□□ -0.34
CLTCL1-209ENST00000617103 SYNE3Q6ZMZ3 975 aa12.9□□□□□ -0.34
CLTCL1-209ENST00000617103 COG3Q96JB2 828 aa12.9□□□□□ -0.34
CLTCL1-209ENST00000617103 PRPF40AO75400 957 aaKnown RBP12.89□□□□□ -0.35
CLTCL1-209ENST00000617103 PDE4CQ08493 712 aa12.89□□□□□ -0.35
CLTCL1-209ENST00000617103 CWC15Q9P013 229 aaKnown RBP12.89□□□□□ -0.35
CLTCL1-209ENST00000617103 RABEP1Q15276 862 aa12.89□□□□□ -0.35
CLTCL1-209ENST00000617103 GNAI1P63096 354 aa12.89□□□□□ -0.35
CLTCL1-209ENST00000617103 MCM2P49736 904 aa12.89□□□□□ -0.35
CLTCL1-209ENST00000617103 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.89□□□□□ -0.35
CLTCL1-209ENST00000617103 WASHC2CQ9Y4E1 1318 aa12.89□□□□□ -0.35
CLTCL1-209ENST00000617103 NAT10Q9H0A0 1025 aaKnown RBP12.88□□□□□ -0.35
CLTCL1-209ENST00000617103 LTV1Q96GA3 475 aaPredicted RBP12.88□□□□□ -0.35
CLTCL1-209ENST00000617103 TRIM5Q9C035 493 aa12.88□□□□□ -0.35
CLTCL1-209ENST00000617103 FGD6Q6ZV73 1430 aa12.88□□□□□ -0.35
CLTCL1-209ENST00000617103 MSH5O43196 834 aa12.88□□□□□ -0.35
CLTCL1-209ENST00000617103 C9orf78Q9NZ63 289 aaPredicted RBP12.88□□□□□ -0.35
CLTCL1-209ENST00000617103 SMG6Q86US8 1419 aaKnown RBP12.88□□□□□ -0.35
CLTCL1-209ENST00000617103 MARCH6O60337 910 aa12.87□□□□□ -0.35
CLTCL1-209ENST00000617103 MCM4P33991 863 aa12.87□□□□□ -0.35
CLTCL1-209ENST00000617103 VGFO15240 615 aaPredicted RBP12.87□□□□□ -0.35
CLTCL1-209ENST00000617103 HSP90AB4PQ58FF6 505 aa12.87□□□□□ -0.35
CLTCL1-209ENST00000617103 AK7Q96M32 723 aa12.87□□□□□ -0.35
CLTCL1-209ENST00000617103 RUFY1Q96T51 708 aa12.86□□□□□ -0.35
CLTCL1-209ENST00000617103 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.86□□□□□ -0.35
CLTCL1-209ENST00000617103 STAC3Q96MF2 364 aa12.86□□□□□ -0.35
CLTCL1-209ENST00000617103 ERC2O15083 957 aa12.85□□□□□ -0.35
CLTCL1-209ENST00000617103 NEK4P51957 841 aa12.85□□□□□ -0.35
CLTCL1-209ENST00000617103 NEXNQ0ZGT2 675 aa12.85□□□□□ -0.35
CLTCL1-209ENST00000617103 FKBP5Q13451 457 aaPredicted RBP12.85□□□□□ -0.35
CLTCL1-209ENST00000617103 CCDC9Q9Y3X0 531 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms