RNA–Protein interactions for RNA: ENST00000616760.1

CLIC1-210, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIC1, Length 1,098 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-210ENST00000616760 MYO3AQ8NEV4 1616 aa15.35■□□□□ 0.05
CLIC1-210ENST00000616760 CFDP1Q9UEE9 299 aaPredicted RBP15.35■□□□□ 0.05
CLIC1-210ENST00000616760 LTBP4Q8N2S1 1624 aa15.34■□□□□ 0.05
CLIC1-210ENST00000616760 A2MP01023 1474 aa15.33■□□□□ 0.05
CLIC1-210ENST00000616760 VPS8Q8N3P4 1428 aa15.33■□□□□ 0.04
CLIC1-210ENST00000616760 IER5LQ5T953 404 aa15.32■□□□□ 0.04
CLIC1-210ENST00000616760 ZMYM3Q14202 1370 aa15.32■□□□□ 0.04
CLIC1-210ENST00000616760 CEP170BQ9Y4F5 1589 aaPredicted RBP15.32■□□□□ 0.04
CLIC1-210ENST00000616760 RGL2O15211 777 aa15.31■□□□□ 0.04
CLIC1-210ENST00000616760 VGFO15240 615 aaPredicted RBP15.31■□□□□ 0.04
CLIC1-210ENST00000616760 SPATA31D1Q6ZQQ2 1576 aa15.31■□□□□ 0.04
CLIC1-210ENST00000616760 HNRNPMP52272 730 aaKnown RBP eCLIP15.3■□□□□ 0.04
CLIC1-210ENST00000616760 PLA2R1Q13018 1463 aa15.3■□□□□ 0.04
CLIC1-210ENST00000616760 ILDR2Q71H61 639 aa15.3■□□□□ 0.04
CLIC1-210ENST00000616760 TIAM1Q13009 1591 aa15.29■□□□□ 0.04
CLIC1-210ENST00000616760 LHX8Q68G74 356 aa15.29■□□□□ 0.04
CLIC1-210ENST00000616760 TAOK2Q9UL54 1235 aa15.27■□□□□ 0.04
CLIC1-210ENST00000616760 POLR1AO95602 1720 aaPredicted RBP15.26■□□□□ 0.03
CLIC1-210ENST00000616760 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.26■□□□□ 0.03
CLIC1-210ENST00000616760 ZFP91Q96JP5 570 aaPredicted RBP15.26■□□□□ 0.03
CLIC1-210ENST00000616760 FAM135AQ9P2D6 1515 aa15.26■□□□□ 0.03
CLIC1-210ENST00000616760 PTPRKQ15262 1439 aa15.26■□□□□ 0.03
CLIC1-210ENST00000616760 POTEFA5A3E0 1075 aa15.25■□□□□ 0.03
CLIC1-210ENST00000616760 GOLGA2Q08379 1002 aa15.25■□□□□ 0.03
CLIC1-210ENST00000616760 NCOA2Q15596 1464 aa15.25■□□□□ 0.03
CLIC1-210ENST00000616760 RTEL1-TNFRSF6BF6WH68 1400 aa15.25■□□□□ 0.03
CLIC1-210ENST00000616760 TCOF1Q13428 1488 aaKnown RBP15.24■□□□□ 0.03
CLIC1-210ENST00000616760 SEC24BO95487 1268 aa15.23■□□□□ 0.03
CLIC1-210ENST00000616760 GGT6Q6P531 493 aa15.23■□□□□ 0.03
CLIC1-210ENST00000616760 CABP2Q9NPB3 220 aa15.23■□□□□ 0.03
CLIC1-210ENST00000616760 MAP3K1Q13233 1512 aa15.22■□□□□ 0.03
CLIC1-210ENST00000616760 LRRC9Q6ZRR7 1453 aa15.22■□□□□ 0.03
CLIC1-210ENST00000616760 COLQQ9Y215 455 aaPredicted RBP15.22■□□□□ 0.03
CLIC1-210ENST00000616760 DNMT1P26358 1616 aaKnown RBP15.21■□□□□ 0.03
CLIC1-210ENST00000616760 A2ML1A8K2U0 1454 aa15.21■□□□□ 0.03
CLIC1-210ENST00000616760 ZNF644Q9H582 1327 aaPredicted RBP15.21■□□□□ 0.03
CLIC1-210ENST00000616760 POTEB2H3BUK9 544 aa15.21■□□□□ 0.03
CLIC1-210ENST00000616760 MKRN3Q13064 507 aaKnown RBP15.21■□□□□ 0.03
CLIC1-210ENST00000616760 KDM5DQ9BY66 1539 aa15.21■□□□□ 0.03
CLIC1-210ENST00000616760 MBD5Q9P267 1494 aa15.2■□□□□ 0.02
CLIC1-210ENST00000616760 NCKAP5LQ9HCH0 1330 aa15.2■□□□□ 0.02
CLIC1-210ENST00000616760 IRX5P78411 483 aaPredicted RBP15.2■□□□□ 0.02
CLIC1-210ENST00000616760 CCDC141Q6ZP82 1450 aa15.2■□□□□ 0.02
CLIC1-210ENST00000616760 RSPH4AQ5TD94 716 aa15.19■□□□□ 0.02
CLIC1-210ENST00000616760 ZNF335Q9H4Z2 1342 aaPredicted RBP15.18■□□□□ 0.02
CLIC1-210ENST00000616760 DHX29Q7Z478 1369 aaKnown RBP15.18■□□□□ 0.02
CLIC1-210ENST00000616760 CAMSAP2Q08AD1 1489 aa15.18■□□□□ 0.02
CLIC1-210ENST00000616760 PZPP20742 1482 aa15.16■□□□□ 0.02
CLIC1-210ENST00000616760 PLCG2P16885 1265 aa15.16■□□□□ 0.02
CLIC1-210ENST00000616760 ZC3H13Q5T200 1668 aaKnown RBP15.16■□□□□ 0.02
CLIC1-210ENST00000616760 ARHGEF5Q12774 1597 aa15.15■□□□□ 0.02
CLIC1-210ENST00000616760 UBAP1LF5GYI3 381 aa15.15■□□□□ 0.02
CLIC1-210ENST00000616760 KANK4Q5T7N3 995 aaPredicted RBP15.15■□□□□ 0.02
CLIC1-210ENST00000616760 OCEL1Q9H607 264 aa15.15■□□□□ 0.02
CLIC1-210ENST00000616760 CPS1P31327 1500 aa15.15■□□□□ 0.02
CLIC1-210ENST00000616760 BCL11BQ9C0K0 894 aaPredicted RBP15.14■□□□□ 0.01
CLIC1-210ENST00000616760 TNRQ92752 1358 aa15.13■□□□□ 0.01
CLIC1-210ENST00000616760 TSPY4P0CV99 314 aa15.13■□□□□ 0.01
CLIC1-210ENST00000616760 TSPY10P0CW01 314 aa15.13■□□□□ 0.01
CLIC1-210ENST00000616760 EFCAB3Q8N7B9 438 aa15.13■□□□□ 0.01
CLIC1-210ENST00000616760 NEURL4Q96JN8 1562 aa15.13■□□□□ 0.01
CLIC1-210ENST00000616760 STK25O00506 426 aa15.12■□□□□ 0.01
CLIC1-210ENST00000616760 KIF3BO15066 747 aa15.12■□□□□ 0.01
CLIC1-210ENST00000616760 AMER1Q5JTC6 1135 aaPredicted RBP15.12■□□□□ 0.01
CLIC1-210ENST00000616760 DEPDC5O75140 1603 aa15.12■□□□□ 0.01
CLIC1-210ENST00000616760 NLRP1Q9C000 1473 aa15.12■□□□□ 0.01
CLIC1-210ENST00000616760 MYOM3Q5VTT5 1437 aa15.11■□□□□ 0.01
CLIC1-210ENST00000616760 MIA2Q96PC5 1412 aa15.11■□□□□ 0.01
CLIC1-210ENST00000616760 RNF17Q9BXT8 1623 aaKnown RBP15.11■□□□□ 0.01
CLIC1-210ENST00000616760 EIF2AK4Q9P2K8 1649 aaKnown RBP15.11■□□□□ 0.01
CLIC1-210ENST00000616760 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.11■□□□□ 0.01
CLIC1-210ENST00000616760 STK24Q9Y6E0 443 aa15.11■□□□□ 0.01
CLIC1-210ENST00000616760 POTEJP0CG39 1038 aa15.1■□□□□ 0.01
CLIC1-210ENST00000616760 WASHC2CQ9Y4E1 1318 aa15.1■□□□□ 0.01
CLIC1-210ENST00000616760 UGGT1Q9NYU2 1555 aa15.1■□□□□ 0.01
CLIC1-210ENST00000616760 MAST1Q9Y2H9 1570 aa15.09■□□□□ 0.01
CLIC1-210ENST00000616760 SHANK2Q9UPX8 1470 aa15.08■□□□□ 0.01
CLIC1-210ENST00000616760 PDCD7Q8N8D1 485 aaKnown RBP15.08■□□□□ 0
CLIC1-210ENST00000616760 IQGAP1P46940 1657 aa15.08■□□□□ 0
CLIC1-210ENST00000616760 THEMISQ8N1K5 641 aaPredicted RBP15.07■□□□□ 0
CLIC1-210ENST00000616760 ANKLE2Q86XL3 938 aa15.06■□□□□ 0
CLIC1-210ENST00000616760 RTN4Q9NQC3 1192 aaKnown RBP15.06■□□□□ 0
CLIC1-210ENST00000616760 MED14O60244 1454 aa15.06■□□□□ 0
CLIC1-210ENST00000616760 TOM1O60784 492 aa15.05■□□□□ -0
CLIC1-210ENST00000616760 FBXO31Q5XUX0 539 aaPredicted RBP15.05■□□□□ -0
CLIC1-210ENST00000616760 VWDEQ8N2E2 1590 aa15.05■□□□□ -0
CLIC1-210ENST00000616760 CEP152O94986 1710 aa15.04■□□□□ -0
CLIC1-210ENST00000616760 SYNMO15061 1565 aa15.04■□□□□ -0
CLIC1-210ENST00000616760 ABCC3O15438 1527 aa15.04■□□□□ -0
CLIC1-210ENST00000616760 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.04■□□□□ -02e-12■■■□□ 15.8
CLIC1-210ENST00000616760 NPHP4O75161 1426 aaPredicted RBP15.03■□□□□ -0
CLIC1-210ENST00000616760 SOX12O15370 315 aa15.03■□□□□ -0
CLIC1-210ENST00000616760 OTUD5Q96G74 571 aa15.03■□□□□ -0
CLIC1-210ENST00000616760 MED1Q15648 1581 aaPredicted RBP15.02■□□□□ -0
CLIC1-210ENST00000616760 MAMSTRQ6ZN01 415 aa15.02■□□□□ -0
CLIC1-210ENST00000616760 CFAP65Q6ZU64 1925 aaKnown RBP15.01□□□□□ -0.01
CLIC1-210ENST00000616760 UBR1Q8IWV7 1749 aa15□□□□□ -0.01
CLIC1-210ENST00000616760 CROCC2H7BZ55 1655 aa15□□□□□ -0.01
CLIC1-210ENST00000616760 PTPN23Q9H3S7 1636 aa15□□□□□ -0.01
CLIC1-210ENST00000616760 HS6ST3Q8IZP7 471 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms