RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 TSPY4P0CV99 314 aa20.92■□□□□ 0.94
NOP56-220ENST00000616692 TSPY10P0CW01 314 aa20.92■□□□□ 0.94
NOP56-220ENST00000616692 VWDEQ8N2E2 1590 aa20.92■□□□□ 0.94
NOP56-220ENST00000616692 NAP1L2Q9ULW6 460 aaPredicted RBP20.92■□□□□ 0.94
NOP56-220ENST00000616692 NAP1L5Q96NT1 182 aaPredicted RBP20.91■□□□□ 0.94
NOP56-220ENST00000616692 UGGT1Q9NYU2 1555 aa20.91■□□□□ 0.94
NOP56-220ENST00000616692 TOM1O60784 492 aa20.9■□□□□ 0.94
NOP56-220ENST00000616692 NPHP4O75161 1426 aaPredicted RBP20.89■□□□□ 0.94
NOP56-220ENST00000616692 ABCC3O15438 1527 aa20.89■□□□□ 0.93
NOP56-220ENST00000616692 LRRC9Q6ZRR7 1453 aa20.89■□□□□ 0.93
NOP56-220ENST00000616692 WASHC2AQ641Q2 1341 aa20.88■□□□□ 0.93
NOP56-220ENST00000616692 RRP9O43818 475 aaKnown RBP20.87■□□□□ 0.93
NOP56-220ENST00000616692 VPS8Q8N3P4 1428 aa20.87■□□□□ 0.93
NOP56-220ENST00000616692 SYNMO15061 1565 aa20.87■□□□□ 0.93
NOP56-220ENST00000616692 FBXO31Q5XUX0 539 aaPredicted RBP20.86■□□□□ 0.93
NOP56-220ENST00000616692 IQGAP1P46940 1657 aa20.85■□□□□ 0.93
NOP56-220ENST00000616692 BRPF3Q9ULD4 1205 aa20.85■□□□□ 0.93
NOP56-220ENST00000616692 DUOX2Q9NRD8 1548 aa20.84■□□□□ 0.93
NOP56-220ENST00000616692 ERVK-7P63135 1459 aa20.84■□□□□ 0.93
NOP56-220ENST00000616692 HSP90AA2PQ14568 343 aaPredicted RBP20.84■□□□□ 0.93
NOP56-220ENST00000616692 ARHGAP31Q2M1Z3 1444 aa20.84■□□□□ 0.93
NOP56-220ENST00000616692 MYOM3Q5VTT5 1437 aa20.83■□□□□ 0.92
NOP56-220ENST00000616692 PAK3O75914 559 aaPredicted RBP20.82■□□□□ 0.92
NOP56-220ENST00000616692 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.82■□□□□ 0.92
NOP56-220ENST00000616692 MROH1Q8NDA8 1641 aa20.82■□□□□ 0.92
NOP56-220ENST00000616692 SAMD1Q6SPF0 538 aaPredicted RBP20.8■□□□□ 0.92
NOP56-220ENST00000616692 MED1Q15648 1581 aaPredicted RBP20.79■□□□□ 0.92
NOP56-220ENST00000616692 SLIT1O75093 1534 aa20.78■□□□□ 0.92
NOP56-220ENST00000616692 ARHGAP23Q9P227 1491 aa20.78■□□□□ 0.92
NOP56-220ENST00000616692 ERBINQ96RT1 1412 aa20.78■□□□□ 0.92
NOP56-220ENST00000616692 PRDM15P57071 1507 aaPredicted RBP20.77■□□□□ 0.92
NOP56-220ENST00000616692 KDM5AP29375 1690 aaKnown RBP20.77■□□□□ 0.92
NOP56-220ENST00000616692 FAM43AQ8N2R8 423 aa20.76■□□□□ 0.91
NOP56-220ENST00000616692 UBR1Q8IWV7 1749 aa20.76■□□□□ 0.91
NOP56-220ENST00000616692 NPM2Q86SE8 214 aaKnown RBP20.76■□□□□ 0.91
NOP56-220ENST00000616692 HSPA1LP34931 641 aa20.75■□□□□ 0.91
NOP56-220ENST00000616692 CHMP4BQ9H444 224 aaKnown RBP20.75■□□□□ 0.91
NOP56-220ENST00000616692 ALKQ9UM73 1620 aa20.75■□□□□ 0.91
NOP56-220ENST00000616692 LRRC7Q96NW7 1537 aa20.75■□□□□ 0.91
NOP56-220ENST00000616692 BBXQ8WY36 941 aaPredicted RBP20.74■□□□□ 0.91
NOP56-220ENST00000616692 HAP1P54257 671 aaPredicted RBP20.74■□□□□ 0.91
NOP56-220ENST00000616692 SCAF11Q99590 1463 aaKnown RBP20.74■□□□□ 0.91
NOP56-220ENST00000616692 CROCC2H7BZ55 1655 aa20.73■□□□□ 0.91
NOP56-220ENST00000616692 IPO4Q8TEX9 1081 aaKnown RBP20.72■□□□□ 0.91
NOP56-220ENST00000616692 LMTK2Q8IWU2 1503 aa20.71■□□□□ 0.91
NOP56-220ENST00000616692 CEP152O94986 1710 aa20.71■□□□□ 0.91
NOP56-220ENST00000616692 PRDM4Q9UKN5 801 aa20.7■□□□□ 0.9
NOP56-220ENST00000616692 STRCP1A6NGW2 1772 aa20.69■□□□□ 0.9
NOP56-220ENST00000616692 GTF2E1P29083 439 aaPredicted RBP20.67■□□□□ 0.9
NOP56-220ENST00000616692 PIP4K2BP78356 416 aa20.67■□□□□ 0.9
NOP56-220ENST00000616692 KIF15Q9NS87 1388 aa20.67■□□□□ 0.9
NOP56-220ENST00000616692 KANK1Q14678 1352 aa20.66■□□□□ 0.9
NOP56-220ENST00000616692 ABCC5O15440 1437 aa20.65■□□□□ 0.9
NOP56-220ENST00000616692 NEFMP07197 916 aa20.65■□□□□ 0.9
NOP56-220ENST00000616692 USP35Q9P2H5 1018 aa20.65■□□□□ 0.9
NOP56-220ENST00000616692 PTPN23Q9H3S7 1636 aa20.64■□□□□ 0.89
NOP56-220ENST00000616692 EID1Q9Y6B2 187 aa20.63■□□□□ 0.89
NOP56-220ENST00000616692 CALD1Q05682 793 aaKnown RBP20.63■□□□□ 0.89
NOP56-220ENST00000616692 KANK4Q5T7N3 995 aaPredicted RBP20.61■□□□□ 0.89
NOP56-220ENST00000616692 TMEM2Q9UHN6 1383 aa20.61■□□□□ 0.89
NOP56-220ENST00000616692 DAPK1P53355 1430 aa20.61■□□□□ 0.89
NOP56-220ENST00000616692 TXNDC2Q86VQ3 553 aa20.6■□□□□ 0.89
NOP56-220ENST00000616692 PIK3C2BO00750 1634 aa20.59■□□□□ 0.89
NOP56-220ENST00000616692 FAM135BQ49AJ0 1406 aa20.59■□□□□ 0.89
NOP56-220ENST00000616692 HSP90AA1P07900 732 aaKnown RBP20.59■□□□□ 0.89
NOP56-220ENST00000616692 ANKRD30AQ9BXX3 1397 aa20.59■□□□□ 0.89
NOP56-220ENST00000616692 EFCAB6Q5THR3 1501 aa20.59■□□□□ 0.89
NOP56-220ENST00000616692 ADGRL2O95490 1459 aa20.57■□□□□ 0.88
NOP56-220ENST00000616692 FGD6Q6ZV73 1430 aa20.57■□□□□ 0.88
NOP56-220ENST00000616692 NOS1P29475 1434 aa20.56■□□□□ 0.88
NOP56-220ENST00000616692 LTKP29376 864 aa20.56■□□□□ 0.88
NOP56-220ENST00000616692 RPRD2Q5VT52 1461 aaKnown RBP20.56■□□□□ 0.88
NOP56-220ENST00000616692 CANXP27824 592 aaKnown RBP20.56■□□□□ 0.88
NOP56-220ENST00000616692 PHF23Q9BUL5 403 aaPredicted RBP20.55■□□□□ 0.88
NOP56-220ENST00000616692 XIRP1Q702N8 1843 aaKnown RBP20.55■□□□□ 0.88
NOP56-220ENST00000616692 NKTRP30414 1462 aaKnown RBP20.55■□□□□ 0.88
NOP56-220ENST00000616692 NWD1Q149M9 1564 aa20.55■□□□□ 0.88
NOP56-220ENST00000616692 STAC3Q96MF2 364 aa20.54■□□□□ 0.88
NOP56-220ENST00000616692 TET3O43151 1660 aa20.54■□□□□ 0.88
NOP56-220ENST00000616692 ADGRB3O60242 1522 aa20.54■□□□□ 0.88
NOP56-220ENST00000616692 ZFP91Q96JP5 570 aaPredicted RBP20.54■□□□□ 0.88
NOP56-220ENST00000616692 KCNA6P17658 529 aa20.53■□□□□ 0.88
NOP56-220ENST00000616692 RGS3P49796 1198 aa20.53■□□□□ 0.88
NOP56-220ENST00000616692 C14orf37Q86TY3 774 aa20.53■□□□□ 0.88
NOP56-220ENST00000616692 SLC52A1Q9NWF4 448 aa20.53■□□□□ 0.88
NOP56-220ENST00000616692 RRP7BPQ9NSQ0 103 aa20.5■□□□□ 0.87
NOP56-220ENST00000616692 IPO9Q96P70 1041 aaKnown RBP20.5■□□□□ 0.87
NOP56-220ENST00000616692 NCOA3Q9Y6Q9 1424 aa20.48■□□□□ 0.87
NOP56-220ENST00000616692 CNKSR2Q8WXI2 1034 aa20.48■□□□□ 0.87
NOP56-220ENST00000616692 ZBTB47Q9UFB7 747 aaPredicted RBP20.48■□□□□ 0.87
NOP56-220ENST00000616692 CENPJQ9HC77 1338 aaPredicted RBP20.47■□□□□ 0.87
NOP56-220ENST00000616692 STAG3Q9UJ98 1225 aa20.47■□□□□ 0.87
NOP56-220ENST00000616692 CFAP65Q6ZU64 1925 aaKnown RBP20.47■□□□□ 0.87
NOP56-220ENST00000616692 IDI1Q13907 227 aa20.46■□□□□ 0.87
NOP56-220ENST00000616692 HDGFP51858 240 aaKnown RBP20.46■□□□□ 0.87
NOP56-220ENST00000616692 CNGB1Q14028 1251 aaPredicted RBP20.46■□□□□ 0.87
NOP56-220ENST00000616692 TEX2Q8IWB9 1127 aa20.45■□□□□ 0.86
NOP56-220ENST00000616692 BCCIPQ9P287 314 aaKnown RBP eCLIP20.44■□□□□ 0.86
NOP56-220ENST00000616692 TMEM94Q12767 1356 aa20.44■□□□□ 0.86
NOP56-220ENST00000616692 GSE1Q14687 1217 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms