RNA–Protein interactions for RNA: ENST00000615597.1

TMEM106C-222, Transcript of transmembrane protein 106C, human

TSL 2

Gene TMEM106C, Length 685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM106C-222	ENST00000615597	NEURL4	Q96JN8	1562 aa		11.57	□□□□□ -0.56
TMEM106C-222	ENST00000615597	POLR1A	O95602	1720 aa	Predicted RBP	11.56	□□□□□ -0.56
TMEM106C-222	ENST00000615597	RRBP1	Q9P2E9	1410 aa	Known RBP	11.56	□□□□□ -0.56
TMEM106C-222	ENST00000615597	RPRD2	Q5VT52	1461 aa	Known RBP	11.56	□□□□□ -0.56
TMEM106C-222	ENST00000615597	NOS1	P29475	1434 aa		11.55	□□□□□ -0.56
TMEM106C-222	ENST00000615597	STRCP1	A6NGW2	1772 aa		11.55	□□□□□ -0.56
TMEM106C-222	ENST00000615597	ANKLE2	Q86XL3	938 aa		11.55	□□□□□ -0.56
TMEM106C-222	ENST00000615597	KDM5A	P29375	1690 aa	Known RBP	11.55	□□□□□ -0.56
TMEM106C-222	ENST00000615597	EFCAB6	Q5THR3	1501 aa		11.54	□□□□□ -0.56
TMEM106C-222	ENST00000615597	ARHGAP23	Q9P227	1491 aa		11.53	□□□□□ -0.56
TMEM106C-222	ENST00000615597	ZRANB1	Q9UGI0	708 aa		11.53	□□□□□ -0.56
TMEM106C-222	ENST00000615597	SLIT1	O75093	1534 aa		11.53	□□□□□ -0.56
TMEM106C-222	ENST00000615597	UNC13B	O14795	1591 aa		11.53	□□□□□ -0.56
TMEM106C-222	ENST00000615597	CFAP65	Q6ZU64	1925 aa	Known RBP	11.52	□□□□□ -0.56
TMEM106C-222	ENST00000615597	UBR1	Q8IWV7	1749 aa		11.52	□□□□□ -0.56
TMEM106C-222	ENST00000615597	MYCN	P04198	464 aa	Predicted RBP	11.52	□□□□□ -0.57
TMEM106C-222	ENST00000615597	ABCB7	O75027	752 aa		11.51	□□□□□ -0.57
TMEM106C-222	ENST00000615597	SLC52A1	Q9NWF4	448 aa		11.51	□□□□□ -0.57
TMEM106C-222	ENST00000615597	TET3	O43151	1660 aa		11.5	□□□□□ -0.57
TMEM106C-222	ENST00000615597	NPHP4	O75161	1426 aa	Predicted RBP	11.5	□□□□□ -0.57
TMEM106C-222	ENST00000615597	SYNM	O15061	1565 aa		11.5	□□□□□ -0.57
TMEM106C-222	ENST00000615597	IDI1	Q13907	227 aa		11.49	□□□□□ -0.57
TMEM106C-222	ENST00000615597	SLC4A1AP	Q9BWU0	796 aa	Known RBP	11.48	□□□□□ -0.57
TMEM106C-222	ENST00000615597	TMEM2	Q9UHN6	1383 aa		11.48	□□□□□ -0.57
TMEM106C-222	ENST00000615597	SCAF11	Q99590	1463 aa	Known RBP	11.48	□□□□□ -0.57
TMEM106C-222	ENST00000615597	IQGAP3	Q86VI3	1631 aa		11.48	□□□□□ -0.57
TMEM106C-222	ENST00000615597	GCC2	Q8IWJ2	1684 aa		11.48	□□□□□ -0.57
TMEM106C-222	ENST00000615597	IQGAP1	P46940	1657 aa		11.47	□□□□□ -0.57
TMEM106C-222	ENST00000615597	PIK3C2B	O00750	1634 aa		11.47	□□□□□ -0.57
TMEM106C-222	ENST00000615597	RXRB	P28702	533 aa		11.47	□□□□□ -0.57
TMEM106C-222	ENST00000615597	LTK	P29376	864 aa		11.47	□□□□□ -0.57
TMEM106C-222	ENST00000615597	MEX3C	Q5U5Q3	659 aa	Known RBP	11.47	□□□□□ -0.57
TMEM106C-222	ENST00000615597	PPARGC1B	Q86YN6	1023 aa	Known RBP	11.46	□□□□□ -0.57
TMEM106C-222	ENST00000615597	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.45	□□□□□ -0.58
TMEM106C-222	ENST00000615597	NUTM2E	B1AL46	878 aa	Predicted RBP	11.45	□□□□□ -0.58
TMEM106C-222	ENST00000615597	NUTM2D	Q5VT03	806 aa	Predicted RBP	11.45	□□□□□ -0.58
TMEM106C-222	ENST00000615597	ZNF772	Q68DY9	489 aa	Predicted RBP	11.45	□□□□□ -0.58
TMEM106C-222	ENST00000615597	NUTM2A	Q8IVF1	878 aa	Predicted RBP	11.45	□□□□□ -0.58
TMEM106C-222	ENST00000615597	LRP6	O75581	1613 aa		11.45	□□□□□ -0.58
TMEM106C-222	ENST00000615597	ADGRB3	O60242	1522 aa		11.45	□□□□□ -0.58
TMEM106C-222	ENST00000615597	NAIP	Q13075	1403 aa		11.44	□□□□□ -0.58
TMEM106C-222	ENST00000615597		E9PCH4	1651 aa		11.44	□□□□□ -0.58
TMEM106C-222	ENST00000615597	ROBO1	Q9Y6N7	1651 aa		11.44	□□□□□ -0.58
TMEM106C-222	ENST00000615597	TXNDC2	Q86VQ3	553 aa		11.44	□□□□□ -0.58
TMEM106C-222	ENST00000615597	EID1	Q9Y6B2	187 aa		11.44	□□□□□ -0.58
TMEM106C-222	ENST00000615597	NUP155	O75694	1391 aa		11.43	□□□□□ -0.58
TMEM106C-222	ENST00000615597	HFM1	A2PYH4	1435 aa		11.43	□□□□□ -0.58
TMEM106C-222	ENST00000615597	ZFYVE9	O95405	1425 aa		11.42	□□□□□ -0.58
TMEM106C-222	ENST00000615597	FAM135B	Q49AJ0	1406 aa		11.42	□□□□□ -0.58
TMEM106C-222	ENST00000615597	XIRP1	Q702N8	1843 aa	Known RBP	11.42	□□□□□ -0.58
TMEM106C-222	ENST00000615597	STAG3	Q9UJ98	1225 aa		11.41	□□□□□ -0.58
TMEM106C-222	ENST00000615597	TMEM131L	A2VDJ0	1609 aa		11.41	□□□□□ -0.58
TMEM106C-222	ENST00000615597	ITGAE	P38570	1179 aa		11.4	□□□□□ -0.58
TMEM106C-222	ENST00000615597	RGS12	O14924	1447 aa		11.4	□□□□□ -0.58
TMEM106C-222	ENST00000615597	PHLPP1	O60346	1717 aa		11.39	□□□□□ -0.59
TMEM106C-222	ENST00000615597	HDGF	P51858	240 aa	Known RBP	11.39	□□□□□ -0.59
TMEM106C-222	ENST00000615597	JCAD	Q9P266	1359 aa		11.39	□□□□□ -0.59
TMEM106C-222	ENST00000615597	YY1	P25490	414 aa		11.38	□□□□□ -0.59
TMEM106C-222	ENST00000615597	PLEKHG1	Q9ULL1	1385 aa		11.38	□□□□□ -0.59
TMEM106C-222	ENST00000615597	CDK12	Q9NYV4	1490 aa	Predicted RBP	11.38	□□□□□ -0.59
TMEM106C-222	ENST00000615597	FOXD4L1	Q9NU39	408 aa		11.37	□□□□□ -0.59
TMEM106C-222	ENST00000615597	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	11.36	□□□□□ -0.59
TMEM106C-222	ENST00000615597	MYO5B	Q9ULV0	1848 aa		11.36	□□□□□ -0.59
TMEM106C-222	ENST00000615597	ACIN1	Q9UKV3	1341 aa	Known RBP	11.35	□□□□□ -0.59
TMEM106C-222	ENST00000615597	RIMS2	Q9UQ26	1411 aa		11.35	□□□□□ -0.59
TMEM106C-222	ENST00000615597	SPHKAP	Q2M3C7	1700 aa		11.35	□□□□□ -0.59
TMEM106C-222	ENST00000615597	KCNA6	P17658	529 aa		11.35	□□□□□ -0.59
TMEM106C-222	ENST00000615597	NWD1	Q149M9	1564 aa		11.34	□□□□□ -0.59
TMEM106C-222	ENST00000615597	TBX22	Q9Y458	520 aa		11.34	□□□□□ -0.59
TMEM106C-222	ENST00000615597	TRPM2	O94759	1503 aa		11.34	□□□□□ -0.59
TMEM106C-222	ENST00000615597	NKTR	P30414	1462 aa	Known RBP	11.33	□□□□□ -0.6
TMEM106C-222	ENST00000615597	PIK3R4	Q99570	1358 aa		11.33	□□□□□ -0.6
TMEM106C-222	ENST00000615597	SENP3-EIF4A1	A0A087X0R7	540 aa		11.33	□□□□□ -0.6
TMEM106C-222	ENST00000615597	LRP5	O75197	1615 aa		11.32	□□□□□ -0.6
TMEM106C-222	ENST00000615597	ADAMTS13	Q76LX8	1427 aa		11.32	□□□□□ -0.6
TMEM106C-222	ENST00000615597	DIP2A	Q14689	1571 aa		11.32	□□□□□ -0.6
TMEM106C-222	ENST00000615597	AFF2	P51816	1311 aa		11.32	□□□□□ -0.6
TMEM106C-222	ENST00000615597	CHD2	O14647	1828 aa	Known RBP	11.31	□□□□□ -0.6
TMEM106C-222	ENST00000615597	SLC26A8	Q96RN1	970 aa		11.31	□□□□□ -0.6
TMEM106C-222	ENST00000615597	NCOA3	Q9Y6Q9	1424 aa		11.31	□□□□□ -0.6
TMEM106C-222	ENST00000615597	ATAD2	Q6PL18	1390 aa		11.3	□□□□□ -0.6
TMEM106C-222	ENST00000615597	RBM42	Q9BTD8	480 aa	Known RBP	11.3	□□□□□ -0.6
TMEM106C-222	ENST00000615597	COL16A1	Q07092	1604 aa	Predicted RBP	11.29	□□□□□ -0.6
TMEM106C-222	ENST00000615597	POLA2	Q14181	598 aa		11.29	□□□□□ -0.6
TMEM106C-222	ENST00000615597	POTEH	Q6S545	545 aa		11.29	□□□□□ -0.6
TMEM106C-222	ENST00000615597	TMEM94	Q12767	1356 aa		11.28	□□□□□ -0.6
TMEM106C-222	ENST00000615597	CLTCL1	P53675	1640 aa		11.28	□□□□□ -0.6
TMEM106C-222	ENST00000615597	SPATA31A6	Q5VVP1	1343 aa		11.28	□□□□□ -0.6
TMEM106C-222	ENST00000615597	PPP1R15A	O75807	674 aa	Predicted RBP	11.27	□□□□□ -0.61
TMEM106C-222	ENST00000615597	CHGA	P10645	457 aa	Known RBP	11.27	□□□□□ -0.61
TMEM106C-222	ENST00000615597	NEXMIF	Q5QGS0	1516 aa		11.26	□□□□□ -0.61
TMEM106C-222	ENST00000615597	RBM6	P78332	1123 aa	Known RBP	11.26	□□□□□ -0.61
TMEM106C-222	ENST00000615597	QTRT2	Q9H974	415 aa	Known RBP	11.26	□□□□□ -0.61
TMEM106C-222	ENST00000615597	NRXN3	Q9Y4C0	1643 aa		11.26	□□□□□ -0.61
TMEM106C-222	ENST00000615597	RPGRIP1L	Q68CZ1	1315 aa		11.26	□□□□□ -0.61
TMEM106C-222	ENST00000615597	KIF1B	O60333	1816 aa		11.25	□□□□□ -0.61
TMEM106C-222	ENST00000615597	PSD	A5PKW4	1024 aa	Predicted RBP	11.25	□□□□□ -0.61
TMEM106C-222	ENST00000615597	HRC	P23327	699 aa		11.25	□□□□□ -0.61
TMEM106C-222	ENST00000615597	PROSER2	Q86WR7	435 aa	Predicted RBP	11.25	□□□□□ -0.61
TMEM106C-222	ENST00000615597	SETD5	Q9C0A6	1442 aa		11.25	□□□□□ -0.61

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