RNA–Protein interactions for RNA: ENST00000613928.1

CCL3-205, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 5

Gene CCL3, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-205ENST00000613928 PCDHGA10Q9Y5H3 936 aa12.86□□□□□ -0.35
CCL3-205ENST00000613928 KDM6BO15054 1643 aa12.86□□□□□ -0.35
CCL3-205ENST00000613928 PCF11O94913 1555 aaKnown RBP12.86□□□□□ -0.35
CCL3-205ENST00000613928 GPR37O15354 613 aa12.85□□□□□ -0.35
CCL3-205ENST00000613928 LHX8Q68G74 356 aa12.85□□□□□ -0.35
CCL3-205ENST00000613928 OTUD5Q96G74 571 aa12.85□□□□□ -0.35
CCL3-205ENST00000613928 ADCY10Q96PN6 1610 aa12.84□□□□□ -0.35
CCL3-205ENST00000613928 MAPKBP1O60336 1514 aa12.84□□□□□ -0.35
CCL3-205ENST00000613928 MAP3K1Q13233 1512 aa12.84□□□□□ -0.35
CCL3-205ENST00000613928 KIAA0586Q9BVV6 1533 aa12.84□□□□□ -0.35
CCL3-205ENST00000613928 FCHSD2O94868 740 aa12.84□□□□□ -0.35
CCL3-205ENST00000613928 HRCP23327 699 aa12.84□□□□□ -0.35
CCL3-205ENST00000613928 MAP3K7O43318 606 aa12.83□□□□□ -0.36
CCL3-205ENST00000613928 PRIM1P49642 420 aaKnown RBP12.83□□□□□ -0.36
CCL3-205ENST00000613928 FOSBP53539 338 aa12.83□□□□□ -0.36
CCL3-205ENST00000613928 KRI1Q8N9T8 703 aaKnown RBP12.83□□□□□ -0.36
CCL3-205ENST00000613928 KHSRPQ92945 711 aaKnown RBP eCLIP12.83□□□□□ -0.36
CCL3-205ENST00000613928 UGGT2Q9NYU1 1516 aa12.83□□□□□ -0.36
CCL3-205ENST00000613928 TIAM1Q13009 1591 aa12.82□□□□□ -0.36
CCL3-205ENST00000613928 CASKIN1Q8WXD9 1431 aa12.82□□□□□ -0.36
CCL3-205ENST00000613928 HIC1Q14526 733 aa12.82□□□□□ -0.36
CCL3-205ENST00000613928 FMN1Q68DA7 1419 aa12.81□□□□□ -0.36
CCL3-205ENST00000613928 FYCO1Q9BQS8 1478 aa12.8□□□□□ -0.36
CCL3-205ENST00000613928 ZNF454Q8N9F8 522 aa12.8□□□□□ -0.36
CCL3-205ENST00000613928 PSDA5PKW4 1024 aaPredicted RBP12.79□□□□□ -0.36
CCL3-205ENST00000613928 GNPATO15228 680 aa12.79□□□□□ -0.36
CCL3-205ENST00000613928 PTGDRQ13258 359 aa12.79□□□□□ -0.36
CCL3-205ENST00000613928 RBM33Q96EV2 1170 aaKnown RBP12.79□□□□□ -0.36
CCL3-205ENST00000613928 AK7Q96M32 723 aa12.79□□□□□ -0.36
CCL3-205ENST00000613928 CFAP43Q8NDM7 1665 aa12.79□□□□□ -0.36
CCL3-205ENST00000613928 ZDHHC16Q969W1 377 aa12.78□□□□□ -0.36
CCL3-205ENST00000613928 HOXB1P14653 301 aaPredicted RBP12.77□□□□□ -0.37
CCL3-205ENST00000613928 LRRC9Q6ZRR7 1453 aa12.77□□□□□ -0.37
CCL3-205ENST00000613928 DISP1Q96F81 1524 aa12.77□□□□□ -0.37
CCL3-205ENST00000613928 MAP2K5Q13163 448 aa12.76□□□□□ -0.37
CCL3-205ENST00000613928 MINK1Q8N4C8 1332 aaPredicted RBP12.76□□□□□ -0.37
CCL3-205ENST00000613928 KIAA0556O60303 1618 aa12.75□□□□□ -0.37
CCL3-205ENST00000613928 CDHR5Q9HBB8 845 aa12.75□□□□□ -0.37
CCL3-205ENST00000613928 ATP1B4Q9UN42 357 aaPredicted RBP12.75□□□□□ -0.37
CCL3-205ENST00000613928 LHX6Q9UPM6 363 aa12.75□□□□□ -0.37
CCL3-205ENST00000613928 PPP4R3BQ5MIZ7 849 aa12.74□□□□□ -0.37
CCL3-205ENST00000613928 LRRIQ1Q96JM4 1722 aa12.74□□□□□ -0.37
CCL3-205ENST00000613928 TSR1Q2NL82 804 aaKnown RBP12.73□□□□□ -0.37
CCL3-205ENST00000613928 RRBP1Q9P2E9 1410 aaKnown RBP12.72□□□□□ -0.37
CCL3-205ENST00000613928 CERKQ8TCT0 537 aa12.72□□□□□ -0.37
CCL3-205ENST00000613928 BRPF1P55201 1214 aaPredicted RBP12.71□□□□□ -0.37
CCL3-205ENST00000613928 C6orf132Q5T0Z8 1188 aa12.71□□□□□ -0.37
CCL3-205ENST00000613928 NPDC1Q9NQX5 325 aaPredicted RBP12.71□□□□□ -0.37
CCL3-205ENST00000613928 NEUROD2Q15784 382 aa12.7□□□□□ -0.38
CCL3-205ENST00000613928 ADAM33Q9BZ11 813 aa12.7□□□□□ -0.38
CCL3-205ENST00000613928 PPRC1Q5VV67 1664 aaKnown RBP12.7□□□□□ -0.38
CCL3-205ENST00000613928 IRF6O14896 467 aa12.69□□□□□ -0.38
CCL3-205ENST00000613928 ADGRL1O94910 1474 aa12.69□□□□□ -0.38
CCL3-205ENST00000613928 FECHP22830 423 aa12.68□□□□□ -0.38
CCL3-205ENST00000613928 CCDC102AQ96A19 550 aa12.68□□□□□ -0.38
CCL3-205ENST00000613928 HECW1Q76N89 1606 aa12.68□□□□□ -0.38
CCL3-205ENST00000613928 PHLDB1Q86UU1 1377 aa12.68□□□□□ -0.38
CCL3-205ENST00000613928 TRIM66O15016 1216 aa12.67□□□□□ -0.38
CCL3-205ENST00000613928 BCL2L12Q9HB09 334 aa12.66□□□□□ -0.38
CCL3-205ENST00000613928 CCNB3Q8WWL7 1395 aa12.66□□□□□ -0.38
CCL3-205ENST00000613928 CCDC18Q5T9S5 1454 aa12.65□□□□□ -0.38
CCL3-205ENST00000613928 RBM27Q9P2N5 1060 aaKnown RBP12.65□□□□□ -0.38
CCL3-205ENST00000613928 EPRSP07814 1512 aaKnown RBP12.65□□□□□ -0.38
CCL3-205ENST00000613928 HECW2Q9P2P5 1572 aa12.64□□□□□ -0.39
CCL3-205ENST00000613928 CARMIL2Q6F5E8 1435 aa12.64□□□□□ -0.39
CCL3-205ENST00000613928 MAGI3Q5TCQ9 1506 aa12.64□□□□□ -0.39
CCL3-205ENST00000613928 RAPGEF6Q8TEU7 1601 aa12.63□□□□□ -0.39
CCL3-205ENST00000613928 PDE4DQ08499 809 aa12.63□□□□□ -0.39
CCL3-205ENST00000613928 PTPRGP23470 1445 aa12.62□□□□□ -0.39
CCL3-205ENST00000613928 ASXL2Q76L83 1435 aa12.62□□□□□ -0.39
CCL3-205ENST00000613928 EHBP1L1Q8N3D4 1523 aa12.62□□□□□ -0.39
CCL3-205ENST00000613928 ABCC2Q92887 1545 aa12.62□□□□□ -0.39
CCL3-205ENST00000613928 MTUS2Q5JR59 1369 aa12.62□□□□□ -0.39
CCL3-205ENST00000613928 PTPREP23469 700 aa12.62□□□□□ -0.39
CCL3-205ENST00000613928 CDK13Q14004 1512 aaKnown RBP12.62□□□□□ -0.39
CCL3-205ENST00000613928 GLI2P10070 1586 aa12.61□□□□□ -0.39
CCL3-205ENST00000613928 NUP153P49790 1475 aaKnown RBP12.61□□□□□ -0.39
CCL3-205ENST00000613928 ZEB1P37275 1124 aaPredicted RBP12.61□□□□□ -0.39
CCL3-205ENST00000613928 TMEM132AQ24JP5 1023 aa12.6□□□□□ -0.39
CCL3-205ENST00000613928 NCOA2Q15596 1464 aa12.59□□□□□ -0.39
CCL3-205ENST00000613928 PLB1Q6P1J6 1458 aa12.59□□□□□ -0.39
CCL3-205ENST00000613928 PPP1R3GB7ZBB8 358 aa12.59□□□□□ -0.39
CCL3-205ENST00000613928 AMHR2Q16671 573 aa12.59□□□□□ -0.39
CCL3-205ENST00000613928 PADI6Q6TGC4 694 aa12.59□□□□□ -0.39
CCL3-205ENST00000613928 KCNH8Q96L42 1107 aa12.59□□□□□ -0.39
CCL3-205ENST00000613928 COL17A1Q9UMD9 1497 aaPredicted RBP12.59□□□□□ -0.39
CCL3-205ENST00000613928 ARID3CA6NKF2 412 aa12.58□□□□□ -0.4
CCL3-205ENST00000613928 ST18O60284 1047 aa12.58□□□□□ -0.4
CCL3-205ENST00000613928 SUPT6HQ7KZ85 1726 aaKnown RBP12.58□□□□□ -0.4
CCL3-205ENST00000613928 CCER1Q8TC90 406 aaPredicted RBP12.58□□□□□ -0.4
CCL3-205ENST00000613928 MAP3K4Q9Y6R4 1608 aa12.58□□□□□ -0.4
CCL3-205ENST00000613928 ABCA8O94911 1581 aa12.57□□□□□ -0.4
CCL3-205ENST00000613928 PRSS12P56730 875 aa12.57□□□□□ -0.4
CCL3-205ENST00000613928 ERBB3P21860 1342 aa12.57□□□□□ -0.4
CCL3-205ENST00000613928 TTC13Q8NBP0 860 aa12.56□□□□□ -0.4
CCL3-205ENST00000613928 CDCA7LQ96GN5 454 aa12.56□□□□□ -0.4
CCL3-205ENST00000613928 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.56□□□□□ -0.4
CCL3-205ENST00000613928 FGD6Q6ZV73 1430 aa12.55□□□□□ -0.4
CCL3-205ENST00000613928 EMP3P54852 163 aa12.55□□□□□ -0.4
CCL3-205ENST00000613928 GPBP1L1Q9HC44 474 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms