RNA–Protein interactions for RNA: ENST00000608624.5

LINC00343-212, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 774 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-212ENST00000608624 LMTK3Q96Q04 1460 aa13.53□□□□□ -0.24
LINC00343-212ENST00000608624 TNRQ92752 1358 aa13.5□□□□□ -0.25
LINC00343-212ENST00000608624 PLA2R1Q13018 1463 aa13.49□□□□□ -0.25
LINC00343-212ENST00000608624 NOS1P29475 1434 aa13.49□□□□□ -0.25
LINC00343-212ENST00000608624 CLEC11AQ9Y240 323 aa13.49□□□□□ -0.25
LINC00343-212ENST00000608624 ZNF142P52746 1687 aaPredicted RBP13.48□□□□□ -0.25
LINC00343-212ENST00000608624 PCGF6Q9BYE7 350 aa13.48□□□□□ -0.25
LINC00343-212ENST00000608624 CEP170BQ9Y4F5 1589 aaPredicted RBP13.48□□□□□ -0.25
LINC00343-212ENST00000608624 SPHKAPQ2M3C7 1700 aa13.47□□□□□ -0.25
LINC00343-212ENST00000608624 PKD2Q13563 968 aa13.47□□□□□ -0.25
LINC00343-212ENST00000608624 RPRD2Q5VT52 1461 aaKnown RBP13.47□□□□□ -0.25
LINC00343-212ENST00000608624 PIK3C2BO00750 1634 aa13.46□□□□□ -0.25
LINC00343-212ENST00000608624 HSPA2P54652 639 aa13.46□□□□□ -0.25
LINC00343-212ENST00000608624 SPDYE1Q8NFV5 336 aaPredicted RBP13.46□□□□□ -0.25
LINC00343-212ENST00000608624 SLC4A1APQ9BWU0 796 aaKnown RBP13.46□□□□□ -0.25
LINC00343-212ENST00000608624 PLSCR2Q9NRY7 297 aa13.46□□□□□ -0.25
LINC00343-212ENST00000608624 CLTCL1P53675 1640 aa13.46□□□□□ -0.26
LINC00343-212ENST00000608624 POTEIP0CG38 1075 aa13.45□□□□□ -0.26
LINC00343-212ENST00000608624 MPHOSPH9Q99550 1183 aa13.45□□□□□ -0.26
LINC00343-212ENST00000608624 UHRF1BP1Q6BDS2 1440 aa13.45□□□□□ -0.26
LINC00343-212ENST00000608624 SETD1BQ9UPS6 1966 aaKnown RBP13.45□□□□□ -0.26
LINC00343-212ENST00000608624 A2ML1A8K2U0 1454 aa13.44□□□□□ -0.26
LINC00343-212ENST00000608624 PTPRTO14522 1441 aa13.44□□□□□ -0.26
LINC00343-212ENST00000608624 TRPM2O94759 1503 aa13.44□□□□□ -0.26
LINC00343-212ENST00000608624 MYO5BQ9ULV0 1848 aa13.43□□□□□ -0.26
LINC00343-212ENST00000608624 UBR1Q8IWV7 1749 aa13.43□□□□□ -0.26
LINC00343-212ENST00000608624 NLRP1Q9C000 1473 aa13.42□□□□□ -0.26
LINC00343-212ENST00000608624 ADGRB3O60242 1522 aa13.41□□□□□ -0.26
LINC00343-212ENST00000608624 IDI1Q13907 227 aa13.4□□□□□ -0.26
LINC00343-212ENST00000608624 TMEM131LA2VDJ0 1609 aa13.39□□□□□ -0.27
LINC00343-212ENST00000608624 HRCP23327 699 aa13.39□□□□□ -0.27
LINC00343-212ENST00000608624 CHADLQ6NUI6 762 aa13.39□□□□□ -0.27
LINC00343-212ENST00000608624 STRCQ7RTU9 1775 aa13.38□□□□□ -0.27
LINC00343-212ENST00000608624 DHX57Q6P158 1386 aaKnown RBP13.38□□□□□ -0.27
LINC00343-212ENST00000608624 ANKRD30BQ9BXX2 1392 aa13.36□□□□□ -0.27
LINC00343-212ENST00000608624 NEURL4Q96JN8 1562 aa13.36□□□□□ -0.27
LINC00343-212ENST00000608624 ARHGAP23Q9P227 1491 aa13.34□□□□□ -0.27
LINC00343-212ENST00000608624 KDM5AP29375 1690 aaKnown RBP13.33□□□□□ -0.28
LINC00343-212ENST00000608624 NCKAP5LQ9HCH0 1330 aa13.33□□□□□ -0.28
LINC00343-212ENST00000608624 SLIT1O75093 1534 aa13.33□□□□□ -0.28
LINC00343-212ENST00000608624 POLR1AO95602 1720 aaPredicted RBP13.33□□□□□ -0.28
LINC00343-212ENST00000608624 ZFYVE9O95405 1425 aa13.32□□□□□ -0.28
LINC00343-212ENST00000608624 CHGAP10645 457 aaKnown RBP13.32□□□□□ -0.28
LINC00343-212ENST00000608624 SLC52A1Q9NWF4 448 aa13.32□□□□□ -0.28
LINC00343-212ENST00000608624 SSUH2Q9Y2M2 353 aa13.32□□□□□ -0.28
LINC00343-212ENST00000608624 KIF1BO60333 1816 aa13.32□□□□□ -0.28
LINC00343-212ENST00000608624 CCDC144AA2RUR9 1427 aa13.31□□□□□ -0.28
LINC00343-212ENST00000608624 SPATA31E1Q6ZUB1 1445 aa13.31□□□□□ -0.28
LINC00343-212ENST00000608624 LTKP29376 864 aa13.31□□□□□ -0.28
LINC00343-212ENST00000608624 NUTM2DQ5VT03 806 aaPredicted RBP13.31□□□□□ -0.28
LINC00343-212ENST00000608624 TMEM2Q9UHN6 1383 aa13.31□□□□□ -0.28
LINC00343-212ENST00000608624 NEXMIFQ5QGS0 1516 aa13.3□□□□□ -0.28
LINC00343-212ENST00000608624 RIMS2Q9UQ26 1411 aa13.3□□□□□ -0.28
LINC00343-212ENST00000608624 MKRN4PQ13434 485 aaPredicted RBP13.28□□□□□ -0.28
LINC00343-212ENST00000608624 STAG3Q9UJ98 1225 aa13.28□□□□□ -0.28
LINC00343-212ENST00000608624 SCAF11Q99590 1463 aaKnown RBP13.28□□□□□ -0.28
LINC00343-212ENST00000608624 THEMISQ8N1K5 641 aaPredicted RBP13.27□□□□□ -0.29
LINC00343-212ENST00000608624 SIN3AQ96ST3 1273 aa13.27□□□□□ -0.29
LINC00343-212ENST00000608624 ACIN1Q9UKV3 1341 aaKnown RBP13.27□□□□□ -0.29
LINC00343-212ENST00000608624 IFT172Q9UG01 1749 aa13.27□□□□□ -0.29
LINC00343-212ENST00000608624 PPLO60437 1756 aa13.27□□□□□ -0.29
LINC00343-212ENST00000608624 IQGAP1P46940 1657 aa13.26□□□□□ -0.29
LINC00343-212ENST00000608624 NRXN3Q9Y4C0 1643 aa13.26□□□□□ -0.29
LINC00343-212ENST00000608624 ZNF692Q9BU19 519 aaPredicted RBP13.25□□□□□ -0.29
LINC00343-212ENST00000608624 MED14O60244 1454 aa13.24□□□□□ -0.29
LINC00343-212ENST00000608624 NPHP4O75161 1426 aaPredicted RBP13.24□□□□□ -0.29
LINC00343-212ENST00000608624 ZBTB22O15209 634 aa13.24□□□□□ -0.29
LINC00343-212ENST00000608624 RGL3Q3MIN7 710 aa13.24□□□□□ -0.29
LINC00343-212ENST00000608624 ZNF326Q5BKZ1 582 aaKnown RBP13.24□□□□□ -0.29
LINC00343-212ENST00000608624 TXNDC2Q86VQ3 553 aa13.23□□□□□ -0.29
LINC00343-212ENST00000608624 ANKLE2Q86XL3 938 aa13.22□□□□□ -0.29
LINC00343-212ENST00000608624 ATXN8OSP0DMR3 200 aa13.21□□□□□ -0.29
LINC00343-212ENST00000608624 ADAMTS13Q76LX8 1427 aa13.21□□□□□ -0.3
LINC00343-212ENST00000608624 STRCP1A6NGW2 1772 aa13.2□□□□□ -0.3
LINC00343-212ENST00000608624 ADGRF5Q8IZF2 1346 aa13.2□□□□□ -0.3
LINC00343-212ENST00000608624 NEUROD1Q13562 356 aa13.2□□□□□ -0.3
LINC00343-212ENST00000608624 PLEKHG1Q9ULL1 1385 aa13.2□□□□□ -0.3
LINC00343-212ENST00000608624 SETD1AO15047 1707 aaKnown RBP13.19□□□□□ -0.3
LINC00343-212ENST00000608624 SETBP1Q9Y6X0 1596 aa13.19□□□□□ -0.3
LINC00343-212ENST00000608624 PPP1R15AO75807 674 aaPredicted RBP13.18□□□□□ -0.3
LINC00343-212ENST00000608624 SLC26A8Q96RN1 970 aa13.18□□□□□ -0.3
LINC00343-212ENST00000608624 EID1Q9Y6B2 187 aa13.18□□□□□ -0.3
LINC00343-212ENST00000608624 ASXL1Q8IXJ9 1541 aa13.18□□□□□ -0.3
LINC00343-212ENST00000608624 NRXN1Q9ULB1 1477 aa13.17□□□□□ -0.3
LINC00343-212ENST00000608624 ZNF335Q9H4Z2 1342 aaPredicted RBP13.17□□□□□ -0.3
LINC00343-212ENST00000608624 CD44P16070 742 aaKnown RBP13.17□□□□□ -0.3
LINC00343-212ENST00000608624 MYOM2P54296 1465 aa13.16□□□□□ -0.3
LINC00343-212ENST00000608624 PIK3C2GO75747 1445 aa13.15□□□□□ -0.3
LINC00343-212ENST00000608624 LTBP4Q8N2S1 1624 aa13.15□□□□□ -0.3
LINC00343-212ENST00000608624 PRR29P0C7W0 189 aa13.15□□□□□ -0.3
LINC00343-212ENST00000608624 METP08581 1390 aa13.15□□□□□ -0.3
LINC00343-212ENST00000608624 PTPRUQ92729 1446 aa13.14□□□□□ -0.31
LINC00343-212ENST00000608624 ALKQ9UM73 1620 aa13.14□□□□□ -0.31
LINC00343-212ENST00000608624 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.14□□□□□ -0.31
LINC00343-212ENST00000608624 L3MBTL2Q969R5 705 aa13.14□□□□□ -0.31
LINC00343-212ENST00000608624 KDM2AQ9Y2K7 1162 aa13.14□□□□□ -0.31
LINC00343-212ENST00000608624 RPGRIP1LQ68CZ1 1315 aa13.13□□□□□ -0.31
LINC00343-212ENST00000608624 CCER1Q8TC90 406 aaPredicted RBP13.13□□□□□ -0.31
LINC00343-212ENST00000608624 DCAF11Q8TEB1 546 aa13.13□□□□□ -0.31
LINC00343-212ENST00000608624 BCANQ96GW7 911 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms