RNA–Protein interactions for RNA: ENST00000604814.5

TUBE1-209, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-209ENST00000604814 FOXD4L5Q5VV16 416 aaPredicted RBP8.48□□□□□ -1.05
TUBE1-209ENST00000604814 PADI6Q6TGC4 694 aa8.48□□□□□ -1.05
TUBE1-209ENST00000604814 FOXD4L4Q8WXT5 416 aaPredicted RBP8.48□□□□□ -1.05
TUBE1-209ENST00000604814 ZNF428Q96B54 188 aa8.48□□□□□ -1.05
TUBE1-209ENST00000604814 TSKSQ9UJT2 592 aa8.48□□□□□ -1.05
TUBE1-209ENST00000604814 MRPL50Q8N5N7 158 aaKnown RBP8.48□□□□□ -1.05
TUBE1-209ENST00000604814 GOLGA8CPA6NN73 597 aa8.47□□□□□ -1.05
TUBE1-209ENST00000604814 RBM27Q9P2N5 1060 aaKnown RBP8.47□□□□□ -1.05
TUBE1-209ENST00000604814 MYT1LQ9UL68 1186 aa8.47□□□□□ -1.05
TUBE1-209ENST00000604814 HIC1Q14526 733 aa8.46□□□□□ -1.05
TUBE1-209ENST00000604814 BHMG1C9JSJ3 638 aaPredicted RBP8.45□□□□□ -1.06
TUBE1-209ENST00000604814 MFAP1P55081 439 aaKnown RBP8.45□□□□□ -1.06
TUBE1-209ENST00000604814 FAM198AQ9UFP1 575 aa8.45□□□□□ -1.06
TUBE1-209ENST00000604814 SEPT9Q9UHD8 586 aaPredicted RBP8.45□□□□□ -1.06
TUBE1-209ENST00000604814 GNPATO15228 680 aa8.45□□□□□ -1.06
TUBE1-209ENST00000604814 PNMA3Q9UL41 463 aa8.45□□□□□ -1.06
TUBE1-209ENST00000604814 NBPF26B4DH59 902 aa8.44□□□□□ -1.06
TUBE1-209ENST00000604814 TRAK2O60296 914 aa8.44□□□□□ -1.06
TUBE1-209ENST00000604814 PUS7Q96PZ0 661 aaKnown RBP8.44□□□□□ -1.06
TUBE1-209ENST00000604814 SMAPO00193 183 aa8.43□□□□□ -1.06
TUBE1-209ENST00000604814 MMRN1Q13201 1228 aa8.43□□□□□ -1.06
TUBE1-209ENST00000604814 KRI1Q8N9T8 703 aaKnown RBP8.43□□□□□ -1.06
TUBE1-209ENST00000604814 TATDN2Q93075 761 aa8.43□□□□□ -1.06
TUBE1-209ENST00000604814 GPR37O15354 613 aa8.43□□□□□ -1.06
TUBE1-209ENST00000604814 NUDT18Q6ZVK8 323 aa8.43□□□□□ -1.06
TUBE1-209ENST00000604814 TTC13Q8NBP0 860 aa8.43□□□□□ -1.06
TUBE1-209ENST00000604814 GZF1Q9H116 711 aaPredicted RBP8.43□□□□□ -1.06
TUBE1-209ENST00000604814 LAPTM4BQ86VI4 370 aa8.42□□□□□ -1.06
TUBE1-209ENST00000604814 RNF166Q96A37 237 aaPredicted RBP8.42□□□□□ -1.06
TUBE1-209ENST00000604814 CLUAP1Q96AJ1 413 aa8.42□□□□□ -1.06
TUBE1-209ENST00000604814 A6NJR5 290 aa8.41□□□□□ -1.06
TUBE1-209ENST00000604814 FECHP22830 423 aa8.41□□□□□ -1.06
TUBE1-209ENST00000604814 PDE4DQ08499 809 aa8.4□□□□□ -1.06
TUBE1-209ENST00000604814 FAM98CQ17RN3 349 aaKnown RBP8.4□□□□□ -1.06
TUBE1-209ENST00000604814 KCTD12Q96CX2 325 aaKnown RBP8.4□□□□□ -1.06
TUBE1-209ENST00000604814 C3orf80F5H4A9 247 aa8.4□□□□□ -1.07
TUBE1-209ENST00000604814 FAM161AQ3B820 660 aa8.4□□□□□ -1.07
TUBE1-209ENST00000604814 WNT2BQ93097 391 aa8.4□□□□□ -1.07
TUBE1-209ENST00000604814 RBM46Q8TBY0 533 aaKnown RBP8.39□□□□□ -1.07
TUBE1-209ENST00000604814 ZFRQ96KR1 1074 aaKnown RBP8.39□□□□□ -1.07
TUBE1-209ENST00000604814 FAM117AQ9C073 453 aa8.39□□□□□ -1.07
TUBE1-209ENST00000604814 E9PSI1 815 aa8.38□□□□□ -1.07
TUBE1-209ENST00000604814 ANKK1Q8NFD2 765 aa8.38□□□□□ -1.07
TUBE1-209ENST00000604814 ADGRG1Q9Y653 693 aa8.38□□□□□ -1.07
TUBE1-209ENST00000604814 TRIM66O15016 1216 aa8.38□□□□□ -1.07
TUBE1-209ENST00000604814 CHMP4AQ9BY43 222 aa8.38□□□□□ -1.07
TUBE1-209ENST00000604814 OATP04181 439 aa8.37□□□□□ -1.07
TUBE1-209ENST00000604814 HDGFP51858 240 aaKnown RBP8.37□□□□□ -1.07
TUBE1-209ENST00000604814 EYA1Q99502 592 aa8.36□□□□□ -1.07
TUBE1-209ENST00000604814 MAP2K5Q13163 448 aa8.35□□□□□ -1.07
TUBE1-209ENST00000604814 RETREG2Q8NC44 543 aa8.34□□□□□ -1.07
TUBE1-209ENST00000604814 CCDC97Q96F63 343 aaPredicted RBP8.34□□□□□ -1.07
TUBE1-209ENST00000604814 LRCH3Q96II8 777 aa8.34□□□□□ -1.07
TUBE1-209ENST00000604814 MINK1Q8N4C8 1332 aaPredicted RBP8.34□□□□□ -1.07
TUBE1-209ENST00000604814 PTPN5P54829 565 aa8.33□□□□□ -1.08
TUBE1-209ENST00000604814 SAMD7Q7Z3H4 446 aa8.33□□□□□ -1.08
TUBE1-209ENST00000604814 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.33□□□□□ -1.08
TUBE1-209ENST00000604814 USP35Q9P2H5 1018 aa8.33□□□□□ -1.08
TUBE1-209ENST00000604814 ZNF777Q9ULD5 760 aaPredicted RBP8.33□□□□□ -1.08
TUBE1-209ENST00000604814 RCCD1A6NED2 376 aa8.33□□□□□ -1.08
TUBE1-209ENST00000604814 DNAJB2P25686 324 aa8.33□□□□□ -1.08
TUBE1-209ENST00000604814 BCAMP50895 628 aa8.33□□□□□ -1.08
TUBE1-209ENST00000604814 THSD4Q6ZMP0 1018 aa8.33□□□□□ -1.08
TUBE1-209ENST00000604814 PXYLP1Q8TE99 480 aa8.33□□□□□ -1.08
TUBE1-209ENST00000604814 PLEKHG3A1L390 1219 aa8.32□□□□□ -1.08
TUBE1-209ENST00000604814 SOWAHBA6NEL2 793 aa8.32□□□□□ -1.08
TUBE1-209ENST00000604814 IRF6O14896 467 aa8.32□□□□□ -1.08
TUBE1-209ENST00000604814 RNF40O75150 1001 aa8.32□□□□□ -1.08
TUBE1-209ENST00000604814 METTL3Q86U44 580 aaKnown RBP8.32□□□□□ -1.08
TUBE1-209ENST00000604814 SERPINA10Q9UK55 444 aa8.32□□□□□ -1.08
TUBE1-209ENST00000604814 SWT1Q5T5J6 900 aaKnown RBP8.31□□□□□ -1.08
TUBE1-209ENST00000604814 HCSTQ9UBK5 93 aa8.31□□□□□ -1.08
TUBE1-209ENST00000604814 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.3□□□□□ -1.08
TUBE1-209ENST00000604814 SLC4A3P48751 1232 aa8.3□□□□□ -1.08
TUBE1-209ENST00000604814 DDRGK1Q96HY6 314 aa8.3□□□□□ -1.08
TUBE1-209ENST00000604814 IRF5Q13568 498 aa8.3□□□□□ -1.08
TUBE1-209ENST00000604814 CCDC102AQ96A19 550 aa8.3□□□□□ -1.08
TUBE1-209ENST00000604814 HPS5Q9UPZ3 1129 aa8.29□□□□□ -1.08
TUBE1-209ENST00000604814 PPP4CP60510 307 aa8.28□□□□□ -1.08
TUBE1-209ENST00000604814 NLRP7Q8WX94 980 aa8.28□□□□□ -1.08
TUBE1-209ENST00000604814 TMEM134Q9H6X4 195 aa8.28□□□□□ -1.08
TUBE1-209ENST00000604814 SLF2Q8IX21 1173 aa8.27□□□□□ -1.08
TUBE1-209ENST00000604814 TSR3Q9UJK0 312 aaKnown RBP8.27□□□□□ -1.08
TUBE1-209ENST00000604814 PROSER2Q86WR7 435 aaPredicted RBP8.27□□□□□ -1.09
TUBE1-209ENST00000604814 PHOX2BQ99453 314 aa8.26□□□□□ -1.09
TUBE1-209ENST00000604814 WBP1LQ9NX94 342 aa8.26□□□□□ -1.09
TUBE1-209ENST00000604814 MDM2Q00987 491 aaPredicted RBP8.23□□□□□ -1.09
TUBE1-209ENST00000604814 MCM6Q14566 821 aa8.23□□□□□ -1.09
TUBE1-209ENST00000604814 RSPH4AQ5TD94 716 aa8.23□□□□□ -1.09
TUBE1-209ENST00000604814 DDX11L8A8MPP1 907 aa8.21□□□□□ -1.1
TUBE1-209ENST00000604814 NYAP1Q6ZVC0 841 aa8.21□□□□□ -1.1
TUBE1-209ENST00000604814 RDH13Q8NBN7 331 aa8.2□□□□□ -1.1
TUBE1-209ENST00000604814 GOPCQ9HD26 462 aa8.2□□□□□ -1.1
TUBE1-209ENST00000604814 CLCN1P35523 988 aa8.2□□□□□ -1.1
TUBE1-209ENST00000604814 TTLL12Q14166 644 aaPredicted RBP8.2□□□□□ -1.1
TUBE1-209ENST00000604814 SULF1Q8IWU6 871 aa8.2□□□□□ -1.1
TUBE1-209ENST00000604814 FAM177A1Q8N128 213 aaPredicted RBP8.19□□□□□ -1.1
TUBE1-209ENST00000604814 FNBP4Q8N3X1 1017 aaPredicted RBP8.19□□□□□ -1.1
TUBE1-209ENST00000604814 GPCPD1Q9NPB8 672 aa8.19□□□□□ -1.1
TUBE1-209ENST00000604814 SLC10A3P09131 477 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms