RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 KIF7Q2M1P5 1343 aa25.75■■□□□ 1.71
SH3D19-211ENST00000604030 ZNF330Q9Y3S2 320 aaPredicted RBP25.75■■□□□ 1.71
SH3D19-211ENST00000604030 RUSC2Q8N2Y8 1516 aa25.75■■□□□ 1.71
SH3D19-211ENST00000604030 TPM2P07951 284 aa25.75■■□□□ 1.71
SH3D19-211ENST00000604030 RNF20Q5VTR2 975 aa25.75■■□□□ 1.71
SH3D19-211ENST00000604030 SETQ01105 290 aaPredicted RBP25.74■■□□□ 1.71
SH3D19-211ENST00000604030 MRE11P49959 708 aa25.74■■□□□ 1.71
SH3D19-211ENST00000604030 TPD52L1Q16890 204 aaPredicted RBP25.73■■□□□ 1.71
SH3D19-211ENST00000604030 HSP90AB4PQ58FF6 505 aa25.73■■□□□ 1.71
SH3D19-211ENST00000604030 FOXD4L5Q5VV16 416 aaPredicted RBP25.73■■□□□ 1.71
SH3D19-211ENST00000604030 MTERF4Q7Z6M4 381 aaKnown RBP25.73■■□□□ 1.71
SH3D19-211ENST00000604030 FOXD4L4Q8WXT5 416 aaPredicted RBP25.73■■□□□ 1.71
SH3D19-211ENST00000604030 CEP89Q96ST8 783 aa25.72■■□□□ 1.71
SH3D19-211ENST00000604030 WASHC2AQ641Q2 1341 aa25.71■■□□□ 1.71
SH3D19-211ENST00000604030 GNAI1P63096 354 aa25.71■■□□□ 1.71
SH3D19-211ENST00000604030 NEXNQ0ZGT2 675 aa25.71■■□□□ 1.71
SH3D19-211ENST00000604030 SYNE3Q6ZMZ3 975 aa25.71■■□□□ 1.71
SH3D19-211ENST00000604030 FAM43AQ8N2R8 423 aa25.71■■□□□ 1.71
SH3D19-211ENST00000604030 C22orf23Q9BZE7 217 aa25.71■■□□□ 1.71
SH3D19-211ENST00000604030 HOOK1Q9UJC3 728 aaKnown RBP25.71■■□□□ 1.71
SH3D19-211ENST00000604030 AKAP17AQ02040 695 aaKnown RBP25.7■■□□□ 1.71
SH3D19-211ENST00000604030 MAP7D2Q96T17 732 aa25.7■■□□□ 1.71
SH3D19-211ENST00000604030 AMER1Q5JTC6 1135 aaPredicted RBP25.69■■□□□ 1.7
SH3D19-211ENST00000604030 TOMM22Q9NS69 142 aa25.68■■□□□ 1.7
SH3D19-211ENST00000604030 C1orf141Q5JVX7 400 aa25.68■■□□□ 1.7
SH3D19-211ENST00000604030 TEX35Q5T0J7 233 aa25.67■■□□□ 1.7
SH3D19-211ENST00000604030 ANKRD20A12PQ8NF67 263 aa25.67■■□□□ 1.7
SH3D19-211ENST00000604030 NFKBIBQ15653 356 aa25.67■■□□□ 1.7
SH3D19-211ENST00000604030 LRRC9Q6ZRR7 1453 aa25.66■■□□□ 1.7
SH3D19-211ENST00000604030 RIPK4P57078 832 aa25.66■■□□□ 1.7
SH3D19-211ENST00000604030 TEFQ10587 303 aa25.66■■□□□ 1.7
SH3D19-211ENST00000604030 PTPRGP23470 1445 aa25.66■■□□□ 1.7
SH3D19-211ENST00000604030 FYCO1Q9BQS8 1478 aa25.66■■□□□ 1.7
SH3D19-211ENST00000604030 TRIM29Q14134 588 aa25.65■■□□□ 1.7
SH3D19-211ENST00000604030 FANCD2Q9BXW9 1451 aa25.65■■□□□ 1.7
SH3D19-211ENST00000604030 ELL2O00472 640 aaPredicted RBP25.65■■□□□ 1.7
SH3D19-211ENST00000604030 KIF21BO75037 1637 aa25.65■■□□□ 1.7
SH3D19-211ENST00000604030 IPO7O95373 1038 aaKnown RBP25.65■■□□□ 1.7
SH3D19-211ENST00000604030 VSIG10Q8N0Z9 540 aa25.65■■□□□ 1.7
SH3D19-211ENST00000604030 CDC45O75419 566 aa25.64■■□□□ 1.69
SH3D19-211ENST00000604030 CCDC47Q96A33 483 aaKnown RBP25.64■■□□□ 1.69
SH3D19-211ENST00000604030 DDX58O95786 925 aaKnown RBP25.63■■□□□ 1.69
SH3D19-211ENST00000604030 IFIT2P09913 472 aaKnown RBP25.63■■□□□ 1.69
SH3D19-211ENST00000604030 SMC3Q9UQE7 1217 aa25.62■■□□□ 1.69
SH3D19-211ENST00000604030 ERC2O15083 957 aa25.62■■□□□ 1.69
SH3D19-211ENST00000604030 CCDC39Q9UFE4 941 aa25.62■■□□□ 1.69
SH3D19-211ENST00000604030 ANO2Q9NQ90 1003 aa25.62■■□□□ 1.69
SH3D19-211ENST00000604030 NINLQ9Y2I6 1382 aa25.62■■□□□ 1.69
SH3D19-211ENST00000604030 MARCH6O60337 910 aa25.62■■□□□ 1.69
SH3D19-211ENST00000604030 CREBRFQ8IUR6 639 aa25.62■■□□□ 1.69
SH3D19-211ENST00000604030 IGF1RP08069 1367 aa25.62■■□□□ 1.69
SH3D19-211ENST00000604030 C9orf78Q9NZ63 289 aaPredicted RBP25.61■■□□□ 1.69
SH3D19-211ENST00000604030 LETM1O95202 739 aaPredicted RBP25.61■■□□□ 1.69
SH3D19-211ENST00000604030 CASKIN1Q8WXD9 1431 aa25.6■■□□□ 1.69
SH3D19-211ENST00000604030 BICD2Q8TD16 824 aa25.6■■□□□ 1.69
SH3D19-211ENST00000604030 MBD3O95983 291 aa25.59■■□□□ 1.69
SH3D19-211ENST00000604030 MCTP1Q6DN14 999 aa25.59■■□□□ 1.69
SH3D19-211ENST00000604030 SASS6Q6UVJ0 657 aa25.59■■□□□ 1.69
SH3D19-211ENST00000604030 ARGLU1Q9NWB6 273 aaPredicted RBP25.59■■□□□ 1.69
SH3D19-211ENST00000604030 ZNF771Q7L3S4 317 aaPredicted RBP25.59■■□□□ 1.69
SH3D19-211ENST00000604030 SCAPERQ9BY12 1400 aa25.59■■□□□ 1.69
SH3D19-211ENST00000604030 MCM2P49736 904 aa25.59■■□□□ 1.69
SH3D19-211ENST00000604030 RRBP1Q9P2E9 1410 aaKnown RBP25.59■■□□□ 1.69
SH3D19-211ENST00000604030 LTV1Q96GA3 475 aaPredicted RBP25.58■■□□□ 1.69
SH3D19-211ENST00000604030 CPLX1O14810 134 aa25.58■■□□□ 1.68
SH3D19-211ENST00000604030 NUTM2DQ5VT03 806 aaPredicted RBP25.57■■□□□ 1.68
SH3D19-211ENST00000604030 PDE3AQ14432 1141 aa25.57■■□□□ 1.68
SH3D19-211ENST00000604030 PES1O00541 588 aaKnown RBP25.56■■□□□ 1.68
SH3D19-211ENST00000604030 FRAT2O75474 233 aaPredicted RBP25.56■■□□□ 1.68
SH3D19-211ENST00000604030 ERICH3Q5RHP9 1530 aa25.56■■□□□ 1.68
SH3D19-211ENST00000604030 CCDC73Q6ZRK6 1079 aa25.56■■□□□ 1.68
SH3D19-211ENST00000604030 ACBD3Q9H3P7 528 aa25.56■■□□□ 1.68
SH3D19-211ENST00000604030 CCAR2Q8N163 923 aaKnown RBP25.55■■□□□ 1.68
SH3D19-211ENST00000604030 G3BP1Q13283 466 aaKnown RBP eCLIP25.55■■□□□ 1.684e-10■■□□□ 11.8
SH3D19-211ENST00000604030 ANKRD50Q9ULJ7 1429 aa25.55■■□□□ 1.68
SH3D19-211ENST00000604030 TRDNQ13061 729 aa25.54■■□□□ 1.68
SH3D19-211ENST00000604030 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.54■■□□□ 1.68
SH3D19-211ENST00000604030 NASPP49321 788 aaPredicted RBP25.53■■□□□ 1.68
SH3D19-211ENST00000604030 HOMER1Q86YM7 354 aa25.53■■□□□ 1.68
SH3D19-211ENST00000604030 ZNF592Q92610 1267 aa25.53■■□□□ 1.68
SH3D19-211ENST00000604030 TTC5Q8N0Z6 440 aa25.52■■□□□ 1.68
SH3D19-211ENST00000604030 FAM13BQ9NYF5 915 aa25.52■■□□□ 1.68
SH3D19-211ENST00000604030 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.52■■□□□ 1.68
SH3D19-211ENST00000604030 NAT10Q9H0A0 1025 aaKnown RBP25.52■■□□□ 1.68
SH3D19-211ENST00000604030 TRHP20396 242 aaPredicted RBP25.51■■□□□ 1.68
SH3D19-211ENST00000604030 LNPKQ9C0E8 428 aa25.51■■□□□ 1.68
SH3D19-211ENST00000604030 GAPVD1Q14C86 1478 aa25.51■■□□□ 1.67
SH3D19-211ENST00000604030 MINK1Q8N4C8 1332 aaPredicted RBP25.51■■□□□ 1.67
SH3D19-211ENST00000604030 FKBP5Q13451 457 aaPredicted RBP25.51■■□□□ 1.67
SH3D19-211ENST00000604030 AMOTL1Q8IY63 956 aa25.51■■□□□ 1.67
SH3D19-211ENST00000604030 GTF2E1P29083 439 aaPredicted RBP25.5■■□□□ 1.67
SH3D19-211ENST00000604030 FOXD4L6Q3SYB3 417 aaPredicted RBP25.5■■□□□ 1.67
SH3D19-211ENST00000604030 FOXD4L3Q6VB84 417 aaPredicted RBP25.5■■□□□ 1.67
SH3D19-211ENST00000604030 FGD5Q6ZNL6 1462 aa25.5■■□□□ 1.67
SH3D19-211ENST00000604030 CT47B1P0C2W7 299 aaPredicted RBP25.5■■□□□ 1.67
SH3D19-211ENST00000604030 WWC1Q8IX03 1113 aa25.49■■□□□ 1.67
SH3D19-211ENST00000604030 VPS37CA5D8V6 355 aaPredicted RBP25.49■■□□□ 1.67
SH3D19-211ENST00000604030 PSMA5P28066 241 aa25.49■■□□□ 1.67
SH3D19-211ENST00000604030 NCOA2Q15596 1464 aa25.49■■□□□ 1.67
SH3D19-211ENST00000604030 DHX8Q14562 1220 aaKnown RBP25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms