RNA–Protein interactions for RNA: ENST00000601600.1

SYMPK-217, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-217ENST00000601600 TIE1P35590 1138 aa15.18■□□□□ 0.02
SYMPK-217ENST00000601600 TRAPPC8Q9Y2L5 1435 aa15.17■□□□□ 0.02
SYMPK-217ENST00000601600 HSPA2P54652 639 aa15.17■□□□□ 0.02
SYMPK-217ENST00000601600 DDX27Q96GQ7 796 aaKnown RBP15.17■□□□□ 0.02
SYMPK-217ENST00000601600 KIDINS220Q9ULH0 1771 aa15.16■□□□□ 0.02
SYMPK-217ENST00000601600 SAMD9LQ8IVG5 1584 aa15.15■□□□□ 0.02
SYMPK-217ENST00000601600 C3P01024 1663 aa15.14■□□□□ 0.01
SYMPK-217ENST00000601600 ESF1Q9H501 851 aaKnown RBP15.14■□□□□ 0.01
SYMPK-217ENST00000601600 BMP2KQ9NSY1 1161 aaPredicted RBP15.14■□□□□ 0.01
SYMPK-217ENST00000601600 PLEKHH2Q8IVE3 1493 aa15.14■□□□□ 0.01
SYMPK-217ENST00000601600 SYCP2Q9BX26 1530 aa15.13■□□□□ 0.01
SYMPK-217ENST00000601600 GPATCH8Q9UKJ3 1502 aaKnown RBP15.13■□□□□ 0.01
SYMPK-217ENST00000601600 UHRF1BP1Q6BDS2 1440 aa15.13■□□□□ 0.01
SYMPK-217ENST00000601600 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.12■□□□□ 0.01
SYMPK-217ENST00000601600 MTUS2Q5JR59 1369 aa15.11■□□□□ 0.01
SYMPK-217ENST00000601600 CNTLNQ9NXG0 1405 aa15.11■□□□□ 0.01
SYMPK-217ENST00000601600 CEBPAP49715 358 aaPredicted RBP15.11■□□□□ 0.01
SYMPK-217ENST00000601600 ZNF777Q9ULD5 760 aaPredicted RBP15.11■□□□□ 0.01
SYMPK-217ENST00000601600 CCNB3Q8WWL7 1395 aa15.11■□□□□ 0.01
SYMPK-217ENST00000601600 CAMK2BQ13554 666 aa15.1■□□□□ 0.01
SYMPK-217ENST00000601600 ZC3H15Q8WU90 426 aaKnown RBP15.1■□□□□ 0.01
SYMPK-217ENST00000601600 ARIH1Q9Y4X5 557 aaPredicted RBP15.1■□□□□ 0.01
SYMPK-217ENST00000601600 MROH2AA6NES4 1674 aa15.09■□□□□ 0.01
SYMPK-217ENST00000601600 KIAA1107Q9UPP5 1409 aa15.09■□□□□ 0.01
SYMPK-217ENST00000601600 SETD1BQ9UPS6 1966 aaKnown RBP15.09■□□□□ 0.01
SYMPK-217ENST00000601600 ATP7AQ04656 1500 aa15.09■□□□□ 0.01
SYMPK-217ENST00000601600 EHBP1L1Q8N3D4 1523 aa15.09■□□□□ 0.01
SYMPK-217ENST00000601600 INO80Q9ULG1 1556 aaPredicted RBP15.09■□□□□ 0.01
SYMPK-217ENST00000601600 SPAG9O60271 1321 aaKnown RBP15.09■□□□□ 0.01
SYMPK-217ENST00000601600 CFDP1Q9UEE9 299 aaPredicted RBP15.08■□□□□ 0
SYMPK-217ENST00000601600 GALR2O43603 387 aaPredicted RBP15.07■□□□□ 0
SYMPK-217ENST00000601600 TRIM35Q9UPQ4 493 aa15.07■□□□□ 0
SYMPK-217ENST00000601600 SUPT6HQ7KZ85 1726 aaKnown RBP15.06■□□□□ 0
SYMPK-217ENST00000601600 STRCQ7RTU9 1775 aa15.06■□□□□ 0
SYMPK-217ENST00000601600 HNRNPMP52272 730 aaKnown RBP eCLIP15.05■□□□□ -0
SYMPK-217ENST00000601600 PLXNC1O60486 1568 aa15.05■□□□□ -0
SYMPK-217ENST00000601600 TIAM1Q13009 1591 aa15.05■□□□□ -0
SYMPK-217ENST00000601600 ADGBQ8N7X0 1667 aa15.05■□□□□ -0
SYMPK-217ENST00000601600 CEP162Q5TB80 1403 aa15.04■□□□□ -0
SYMPK-217ENST00000601600 A2MP01023 1474 aa15.03■□□□□ -0
SYMPK-217ENST00000601600 NPATQ14207 1427 aa15.03■□□□□ -0
SYMPK-217ENST00000601600 DPY19L2Q6NUT2 758 aa15.03■□□□□ -0
SYMPK-217ENST00000601600 CERKQ8TCT0 537 aa15.03■□□□□ -0
SYMPK-217ENST00000601600 PPP1R15BQ5SWA1 713 aa15.02■□□□□ -0
SYMPK-217ENST00000601600 GPHNQ9NQX3 736 aaPredicted RBP15.02■□□□□ -0
SYMPK-217ENST00000601600 CLTCQ00610 1675 aaKnown RBP15.01□□□□□ -0.01
SYMPK-217ENST00000601600 TMEM132AQ24JP5 1023 aa15□□□□□ -0.01
SYMPK-217ENST00000601600 PTPRTO14522 1441 aa15□□□□□ -0.01
SYMPK-217ENST00000601600 SMYD5Q6GMV2 418 aa14.99□□□□□ -0.01
SYMPK-217ENST00000601600 ZMYM3Q14202 1370 aa14.98□□□□□ -0.01
SYMPK-217ENST00000601600 RTEL1-TNFRSF6BF6WH68 1400 aa14.98□□□□□ -0.01
SYMPK-217ENST00000601600 MBD5Q9P267 1494 aa14.97□□□□□ -0.01
SYMPK-217ENST00000601600 SPATA31D1Q6ZQQ2 1576 aa14.97□□□□□ -0.01
SYMPK-217ENST00000601600 ZNF142P52746 1687 aaPredicted RBP14.97□□□□□ -0.01
SYMPK-217ENST00000601600 MYO3AQ8NEV4 1616 aa14.96□□□□□ -0.01
SYMPK-217ENST00000601600 BRPF1P55201 1214 aaPredicted RBP14.96□□□□□ -0.01
SYMPK-217ENST00000601600 EVX2Q03828 476 aa14.96□□□□□ -0.01
SYMPK-217ENST00000601600 NCOA1Q15788 1441 aa14.96□□□□□ -0.01
SYMPK-217ENST00000601600 ILDR2Q71H61 639 aa14.96□□□□□ -0.01
SYMPK-217ENST00000601600 MICALL2Q8IY33 904 aa14.96□□□□□ -0.01
SYMPK-217ENST00000601600 PDCD7Q8N8D1 485 aaKnown RBP14.96□□□□□ -0.01
SYMPK-217ENST00000601600 GTF3C3Q9Y5Q9 886 aa14.96□□□□□ -0.01
SYMPK-217ENST00000601600 NCOA2Q15596 1464 aa14.95□□□□□ -0.02
SYMPK-217ENST00000601600 SLC24A3Q9HC58 644 aa14.95□□□□□ -0.02
SYMPK-217ENST00000601600 CAMSAP1Q5T5Y3 1602 aa14.95□□□□□ -0.02
SYMPK-217ENST00000601600 CCDC141Q6ZP82 1450 aa14.95□□□□□ -0.02
SYMPK-217ENST00000601600 ZNF644Q9H582 1327 aaPredicted RBP14.94□□□□□ -0.02
SYMPK-217ENST00000601600 GGT6Q6P531 493 aa14.94□□□□□ -0.02
SYMPK-217ENST00000601600 CAMSAP2Q08AD1 1489 aa14.94□□□□□ -0.02
SYMPK-217ENST00000601600 FAM135AQ9P2D6 1515 aa14.93□□□□□ -0.02
SYMPK-217ENST00000601600 HAX1O00165 279 aa14.93□□□□□ -0.02
SYMPK-217ENST00000601600 DSG2Q14126 1118 aa14.93□□□□□ -0.02
SYMPK-217ENST00000601600 RSPH4AQ5TD94 716 aa14.93□□□□□ -0.02
SYMPK-217ENST00000601600 DISP3Q9P2K9 1392 aa14.93□□□□□ -0.02
SYMPK-217ENST00000601600 CEP170BQ9Y4F5 1589 aaPredicted RBP14.93□□□□□ -0.02
SYMPK-217ENST00000601600 ZMYND10O75800 440 aa14.92□□□□□ -0.02
SYMPK-217ENST00000601600 MLLT3P42568 568 aaPredicted RBP14.92□□□□□ -0.02
SYMPK-217ENST00000601600 ATN1P54259 1190 aaPredicted RBP14.92□□□□□ -0.02
SYMPK-217ENST00000601600 EMILIN3Q9NT22 766 aa14.92□□□□□ -0.02
SYMPK-217ENST00000601600 PTPRKQ15262 1439 aa14.92□□□□□ -0.02
SYMPK-217ENST00000601600 ARHGEF5Q12774 1597 aa14.91□□□□□ -0.02
SYMPK-217ENST00000601600 PLA2R1Q13018 1463 aa14.91□□□□□ -0.02
SYMPK-217ENST00000601600 DHX29Q7Z478 1369 aaKnown RBP14.91□□□□□ -0.02
SYMPK-217ENST00000601600 SOCS7O14512 581 aa14.91□□□□□ -0.02
SYMPK-217ENST00000601600 VPS8Q8N3P4 1428 aa14.91□□□□□ -0.02
SYMPK-217ENST00000601600 IQSEC2Q5JU85 1478 aa14.9□□□□□ -0.02
SYMPK-217ENST00000601600 DPYSL4O14531 572 aa14.89□□□□□ -0.03
SYMPK-217ENST00000601600 TRIM26Q12899 539 aaPredicted RBP14.89□□□□□ -0.03
SYMPK-217ENST00000601600 LTBP4Q8N2S1 1624 aa14.88□□□□□ -0.03
SYMPK-217ENST00000601600 KDM5DQ9BY66 1539 aa14.88□□□□□ -0.03
SYMPK-217ENST00000601600 CLCN6P51797 869 aa14.88□□□□□ -0.03
SYMPK-217ENST00000601600 IRX5P78411 483 aaPredicted RBP14.88□□□□□ -0.03
SYMPK-217ENST00000601600 RBM26Q5T8P6 1007 aaKnown RBP14.88□□□□□ -0.03
SYMPK-217ENST00000601600 TIMELESSQ9UNS1 1208 aa14.88□□□□□ -0.03
SYMPK-217ENST00000601600 LRRC9Q6ZRR7 1453 aa14.88□□□□□ -0.03
SYMPK-217ENST00000601600 ATMINO43313 823 aaPredicted RBP14.87□□□□□ -0.03
SYMPK-217ENST00000601600 TMC2Q8TDI7 906 aa14.87□□□□□ -0.03
SYMPK-217ENST00000601600 MAP3K1Q13233 1512 aa14.87□□□□□ -0.03
SYMPK-217ENST00000601600 A2ML1A8K2U0 1454 aa14.85□□□□□ -0.03
SYMPK-217ENST00000601600 TCOF1Q13428 1488 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms