RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 ERICH6BQ5W0A0 696 aa15.26■□□□□ 0.03
ARHGEF1-220ENST00000600274 SLC12A5Q9H2X9 1139 aa15.25■□□□□ 0.03
ARHGEF1-220ENST00000600274 RTEL1-TNFRSF6BF6WH68 1400 aa15.25■□□□□ 0.03
ARHGEF1-220ENST00000600274 MSH5O43196 834 aa15.25■□□□□ 0.03
ARHGEF1-220ENST00000600274 SKAP1Q86WV1 359 aa15.25■□□□□ 0.03
ARHGEF1-220ENST00000600274 POLR1AO95602 1720 aaPredicted RBP15.24■□□□□ 0.03
ARHGEF1-220ENST00000600274 EIF3AQ14152 1382 aaKnown RBP15.24■□□□□ 0.03
ARHGEF1-220ENST00000600274 NOS1P29475 1434 aa15.24■□□□□ 0.03
ARHGEF1-220ENST00000600274 LRPPRCP42704 1394 aaKnown RBP15.23■□□□□ 0.03
ARHGEF1-220ENST00000600274 AMER1Q5JTC6 1135 aaPredicted RBP15.23■□□□□ 0.03
ARHGEF1-220ENST00000600274 APAF1O14727 1248 aa15.23■□□□□ 0.03
ARHGEF1-220ENST00000600274 RRP7AQ9Y3A4 280 aaKnown RBP15.22■□□□□ 0.03
ARHGEF1-220ENST00000600274 E9PCH4 1651 aa15.22■□□□□ 0.03
ARHGEF1-220ENST00000600274 MAGI2Q86UL8 1455 aa15.22■□□□□ 0.03
ARHGEF1-220ENST00000600274 SCAF11Q99590 1463 aaKnown RBP15.22■□□□□ 0.03
ARHGEF1-220ENST00000600274 CENPJQ9HC77 1338 aaPredicted RBP15.22■□□□□ 0.03
ARHGEF1-220ENST00000600274 FAM69CQ0P6D2 419 aa15.21■□□□□ 0.03
ARHGEF1-220ENST00000600274 MORC1Q86VD1 984 aa15.21■□□□□ 0.02
ARHGEF1-220ENST00000600274 PRDM15P57071 1507 aaPredicted RBP15.2■□□□□ 0.02
ARHGEF1-220ENST00000600274 CLTCL1P53675 1640 aa15.2■□□□□ 0.02
ARHGEF1-220ENST00000600274 CARD14Q9BXL6 1004 aa15.19■□□□□ 0.02
ARHGEF1-220ENST00000600274 ANO8Q9HCE9 1232 aaPredicted RBP15.19■□□□□ 0.02
ARHGEF1-220ENST00000600274 CABP2Q9NPB3 220 aa15.19■□□□□ 0.02
ARHGEF1-220ENST00000600274 CRBNQ96SW2 442 aa15.19■□□□□ 0.02
ARHGEF1-220ENST00000600274 SRPK2P78362 688 aaKnown RBP15.18■□□□□ 0.02
ARHGEF1-220ENST00000600274 C20orf194Q5TEA3 1177 aa15.18■□□□□ 0.02
ARHGEF1-220ENST00000600274 FBXO31Q5XUX0 539 aaPredicted RBP15.18■□□□□ 0.02
ARHGEF1-220ENST00000600274 ZNF518AQ6AHZ1 1483 aa15.18■□□□□ 0.02
ARHGEF1-220ENST00000600274 EIF2AK4Q9P2K8 1649 aaKnown RBP15.17■□□□□ 0.02
ARHGEF1-220ENST00000600274 IDI1Q13907 227 aa15.17■□□□□ 0.02
ARHGEF1-220ENST00000600274 TRPM2O94759 1503 aa15.16■□□□□ 0.02
ARHGEF1-220ENST00000600274 MINK1Q8N4C8 1332 aaPredicted RBP15.16■□□□□ 0.02
ARHGEF1-220ENST00000600274 PDE3BQ13370 1112 aa15.16■□□□□ 0.02
ARHGEF1-220ENST00000600274 PTPRTO14522 1441 aa15.16■□□□□ 0.02
ARHGEF1-220ENST00000600274 POGKQ9P215 609 aa15.15■□□□□ 0.02
ARHGEF1-220ENST00000600274 CANXP27824 592 aaKnown RBP15.15■□□□□ 0.02
ARHGEF1-220ENST00000600274 GOLGA2Q08379 1002 aa15.15■□□□□ 0.02
ARHGEF1-220ENST00000600274 RTL5Q5HYW3 569 aaPredicted RBP15.14■□□□□ 0.01
ARHGEF1-220ENST00000600274 NPATQ14207 1427 aa15.14■□□□□ 0.01
ARHGEF1-220ENST00000600274 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.14■□□□□ 0.01
ARHGEF1-220ENST00000600274 PPM1GO15355 546 aaPredicted RBP15.13■□□□□ 0.01
ARHGEF1-220ENST00000600274 STAC3Q96MF2 364 aa15.13■□□□□ 0.01
ARHGEF1-220ENST00000600274 PLEKHH1Q9ULM0 1364 aa15.13■□□□□ 0.01
ARHGEF1-220ENST00000600274 DEKP35659 375 aaKnown RBP15.12■□□□□ 0.01
ARHGEF1-220ENST00000600274 MADDQ8WXG6 1647 aa15.12■□□□□ 0.01
ARHGEF1-220ENST00000600274 ABCA9Q8IUA7 1624 aa15.12■□□□□ 0.01
ARHGEF1-220ENST00000600274 SPHKAPQ2M3C7 1700 aa15.11■□□□□ 0.01
ARHGEF1-220ENST00000600274 VGFO15240 615 aaPredicted RBP15.11■□□□□ 0.01
ARHGEF1-220ENST00000600274 FRAT1Q92837 279 aaPredicted RBP15.11■□□□□ 0.01
ARHGEF1-220ENST00000600274 U2SURPO15042 1029 aaKnown RBP15.11■□□□□ 0.01
ARHGEF1-220ENST00000600274 SPINK5Q9NQ38 1064 aaPredicted RBP15.11■□□□□ 0.01
ARHGEF1-220ENST00000600274 POGZQ7Z3K3 1410 aa15.11■□□□□ 0.01
ARHGEF1-220ENST00000600274 ANP32AP39687 249 aaKnown RBP15.1■□□□□ 0.01
ARHGEF1-220ENST00000600274 RNF123Q5XPI4 1314 aa15.1■□□□□ 0.01
ARHGEF1-220ENST00000600274 NSD3Q9BZ95 1437 aa15.1■□□□□ 0.01
ARHGEF1-220ENST00000600274 BCL2L13Q9BXK5 485 aa15.1■□□□□ 0.01
ARHGEF1-220ENST00000600274 GGNBP2Q9H3C7 697 aa15.1■□□□□ 0.01
ARHGEF1-220ENST00000600274 C14orf93Q9H972 538 aaKnown RBP15.1■□□□□ 0.01
ARHGEF1-220ENST00000600274 INO80Q9ULG1 1556 aaPredicted RBP15.09■□□□□ 0.01
ARHGEF1-220ENST00000600274 MTHFSP49914 203 aa15.09■□□□□ 0.01
ARHGEF1-220ENST00000600274 TET3O43151 1660 aa15.09■□□□□ 0.01
ARHGEF1-220ENST00000600274 DMRT2Q9Y5R5 561 aa15.09■□□□□ 0.01
ARHGEF1-220ENST00000600274 YEATS2Q9ULM3 1422 aa15.09■□□□□ 0.01
ARHGEF1-220ENST00000600274 BCAR3O75815 825 aa15.08■□□□□ 0.01
ARHGEF1-220ENST00000600274 U2AF1L5P0DN76 240 aaPredicted RBP15.08■□□□□ 0.01
ARHGEF1-220ENST00000600274 U2AF1Q01081 240 aaKnown RBP eCLIP15.08■□□□□ 0.01
ARHGEF1-220ENST00000600274 ESF1Q9H501 851 aaKnown RBP15.08■□□□□ 0.01
ARHGEF1-220ENST00000600274 RGS3P49796 1198 aa15.08■□□□□ 0
ARHGEF1-220ENST00000600274 ARAP3Q8WWN8 1544 aa15.08■□□□□ 0
ARHGEF1-220ENST00000600274 DUSP27Q5VZP5 1158 aa15.07■□□□□ 0
ARHGEF1-220ENST00000600274 PRAM1Q96QH2 718 aa15.07■□□□□ 0
ARHGEF1-220ENST00000600274 KIDINS220Q9ULH0 1771 aa15.07■□□□□ 0
ARHGEF1-220ENST00000600274 ASXL1Q8IXJ9 1541 aa15.07■□□□□ 0
ARHGEF1-220ENST00000600274 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.06■□□□□ 0
ARHGEF1-220ENST00000600274 ERVK-7P63135 1459 aa15.06■□□□□ 0
ARHGEF1-220ENST00000600274 EVC2Q86UK5 1308 aa15.06■□□□□ 0
ARHGEF1-220ENST00000600274 CEP152O94986 1710 aa15.05■□□□□ 0
ARHGEF1-220ENST00000600274 EFCAB6Q5THR3 1501 aa15.05■□□□□ 0
ARHGEF1-220ENST00000600274 FANCIQ9NVI1 1328 aa15.05■□□□□ -0
ARHGEF1-220ENST00000600274 PPRC1Q5VV67 1664 aaKnown RBP15.04■□□□□ -0
ARHGEF1-220ENST00000600274 SLC24A1O60721 1099 aa15.04■□□□□ -0
ARHGEF1-220ENST00000600274 EIF5BO60841 1220 aaKnown RBP15.04■□□□□ -0
ARHGEF1-220ENST00000600274 FBLN1P23142 703 aa15.04■□□□□ -0
ARHGEF1-220ENST00000600274 NUTM2FA1L443 756 aa15.04■□□□□ -0
ARHGEF1-220ENST00000600274 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.04■□□□□ -0
ARHGEF1-220ENST00000600274 CFAP53Q96M91 514 aa15.04■□□□□ -0
ARHGEF1-220ENST00000600274 CGNL1Q0VF96 1302 aa15.03■□□□□ -0
ARHGEF1-220ENST00000600274 PAK3O75914 559 aaPredicted RBP15.03■□□□□ -0
ARHGEF1-220ENST00000600274 CLUAP1Q96AJ1 413 aa15.03■□□□□ -0
ARHGEF1-220ENST00000600274 MROH1Q8NDA8 1641 aa15.02■□□□□ -0
ARHGEF1-220ENST00000600274 RNF17Q9BXT8 1623 aaKnown RBP15.02■□□□□ -0
ARHGEF1-220ENST00000600274 BLMP54132 1417 aaPredicted RBP15.02■□□□□ -0
ARHGEF1-220ENST00000600274 WAPLQ7Z5K2 1190 aa15.02■□□□□ -0
ARHGEF1-220ENST00000600274 ZBTB47Q9UFB7 747 aaPredicted RBP15.02■□□□□ -0
ARHGEF1-220ENST00000600274 NOP58Q9Y2X3 529 aaKnown RBP15.02■□□□□ -0
ARHGEF1-220ENST00000600274 ABCA6Q8N139 1617 aa15.02□□□□□ -0.01
ARHGEF1-220ENST00000600274 TCP11L2Q8N4U5 519 aa15.02□□□□□ -0.01
ARHGEF1-220ENST00000600274 SLFN5Q08AF3 891 aa15.01□□□□□ -0.01
ARHGEF1-220ENST00000600274 LAS1LQ9Y4W2 734 aaKnown RBP15.01□□□□□ -0.01
ARHGEF1-220ENST00000600274 MAP3K4Q9Y6R4 1608 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms