RNA–Protein interactions for RNA: ENST00000599589.5

ARHGEF1-218, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-218ENST00000599589 FRAT2O75474 233 aaPredicted RBP25.23■■□□□ 1.63
ARHGEF1-218ENST00000599589 ZMYM4Q5VZL5 1548 aa25.23■■□□□ 1.63
ARHGEF1-218ENST00000599589 ZFYVE16Q7Z3T8 1539 aa25.21■■□□□ 1.63
ARHGEF1-218ENST00000599589 EIF5BO60841 1220 aaKnown RBP25.21■■□□□ 1.63
ARHGEF1-218ENST00000599589 NPM1P06748 294 aaKnown RBP eCLIP25.21■■□□□ 1.63
ARHGEF1-218ENST00000599589 ATP10AO60312 1499 aa25.21■■□□□ 1.63
ARHGEF1-218ENST00000599589 INSRP06213 1382 aa25.21■■□□□ 1.63
ARHGEF1-218ENST00000599589 UBE2Q2Q8WVN8 375 aa25.19■■□□□ 1.62
ARHGEF1-218ENST00000599589 TRPM1Q7Z4N2 1603 aa25.18■■□□□ 1.62
ARHGEF1-218ENST00000599589 RGL3Q3MIN7 710 aa25.16■■□□□ 1.62
ARHGEF1-218ENST00000599589 SCAPERQ9BY12 1400 aa25.16■■□□□ 1.62
ARHGEF1-218ENST00000599589 ADGRL1O94910 1474 aa25.16■■□□□ 1.62
ARHGEF1-218ENST00000599589 NBPF1Q3BBV0 1214 aa25.16■■□□□ 1.62
ARHGEF1-218ENST00000599589 PANK3Q9H999 370 aa25.15■■□□□ 1.62
ARHGEF1-218ENST00000599589 PRAG1Q86YV5 1406 aa25.15■■□□□ 1.62
ARHGEF1-218ENST00000599589 RGS3P49796 1198 aa25.14■■□□□ 1.62
ARHGEF1-218ENST00000599589 ATP7AQ04656 1500 aa25.14■■□□□ 1.61
ARHGEF1-218ENST00000599589 ADAMTS8Q9UP79 889 aa25.14■■□□□ 1.61
ARHGEF1-218ENST00000599589 DISP3Q9P2K9 1392 aa25.13■■□□□ 1.61
ARHGEF1-218ENST00000599589 COL17A1Q9UMD9 1497 aaPredicted RBP25.13■■□□□ 1.61
ARHGEF1-218ENST00000599589 INO80Q9ULG1 1556 aaPredicted RBP25.13■■□□□ 1.61
ARHGEF1-218ENST00000599589 A2MP01023 1474 aa25.12■■□□□ 1.61
ARHGEF1-218ENST00000599589 DUSP27Q5VZP5 1158 aa25.11■■□□□ 1.61
ARHGEF1-218ENST00000599589 PLEKHH1Q9ULM0 1364 aa25.09■■□□□ 1.61
ARHGEF1-218ENST00000599589 FAM43AQ8N2R8 423 aa25.08■■□□□ 1.61
ARHGEF1-218ENST00000599589 TESK2Q96S53 571 aa25.08■■□□□ 1.61
ARHGEF1-218ENST00000599589 DEPDC5O75140 1603 aa25.07■■□□□ 1.6
ARHGEF1-218ENST00000599589 KANK1Q14678 1352 aa25.06■■□□□ 1.6
ARHGEF1-218ENST00000599589 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.05■■□□□ 1.6
ARHGEF1-218ENST00000599589 GPRASP1Q5JY77 1395 aa25.05■■□□□ 1.6
ARHGEF1-218ENST00000599589 KIF3BO15066 747 aa25.03■■□□□ 1.6
ARHGEF1-218ENST00000599589 RSPH6AQ9H0K4 717 aa25.02■■□□□ 1.6
ARHGEF1-218ENST00000599589 PTPRTO14522 1441 aa25.01■■□□□ 1.6
ARHGEF1-218ENST00000599589 CD109Q6YHK3 1445 aa25.01■■□□□ 1.6
ARHGEF1-218ENST00000599589 GOLGA2Q08379 1002 aa25.01■■□□□ 1.59
ARHGEF1-218ENST00000599589 PRDM15P57071 1507 aaPredicted RBP25.01■■□□□ 1.59
ARHGEF1-218ENST00000599589 WDR43Q15061 677 aaKnown RBP eCLIP25.01■■□□□ 1.59
ARHGEF1-218ENST00000599589 EIF2AK4Q9P2K8 1649 aaKnown RBP25■■□□□ 1.59
ARHGEF1-218ENST00000599589 ZNF518AQ6AHZ1 1483 aa25■■□□□ 1.59
ARHGEF1-218ENST00000599589 ZNF521Q96K83 1311 aa25■■□□□ 1.59
ARHGEF1-218ENST00000599589 VWDEQ8N2E2 1590 aa25■■□□□ 1.59
ARHGEF1-218ENST00000599589 TRPM2O94759 1503 aa25■■□□□ 1.59
ARHGEF1-218ENST00000599589 TET3O43151 1660 aa24.99■■□□□ 1.59
ARHGEF1-218ENST00000599589 TMF1P82094 1093 aa24.99■■□□□ 1.59
ARHGEF1-218ENST00000599589 LAMC1P11047 1609 aa24.98■■□□□ 1.59
ARHGEF1-218ENST00000599589 VIRMAQ69YN4 1812 aaKnown RBP24.98■■□□□ 1.59
ARHGEF1-218ENST00000599589 POGKQ9P215 609 aa24.98■■□□□ 1.59
ARHGEF1-218ENST00000599589 CFAP74Q9C0B2 1584 aa24.96■■□□□ 1.59
ARHGEF1-218ENST00000599589 PPP2R1AP30153 589 aa24.96■■□□□ 1.59
ARHGEF1-218ENST00000599589 STAC3Q96MF2 364 aa24.96■■□□□ 1.59
ARHGEF1-218ENST00000599589 USP19O94966 1318 aa24.95■■□□□ 1.59
ARHGEF1-218ENST00000599589 KIDINS220Q9ULH0 1771 aa24.95■■□□□ 1.58
ARHGEF1-218ENST00000599589 SLFN5Q08AF3 891 aa24.95■■□□□ 1.58
ARHGEF1-218ENST00000599589 SPHKAPQ2M3C7 1700 aa24.94■■□□□ 1.58
ARHGEF1-218ENST00000599589 EIF3AQ14152 1382 aaKnown RBP24.92■■□□□ 1.58
ARHGEF1-218ENST00000599589 POGZQ7Z3K3 1410 aa24.91■■□□□ 1.58
ARHGEF1-218ENST00000599589 MROH1Q8NDA8 1641 aa24.91■■□□□ 1.58
ARHGEF1-218ENST00000599589 IGHDP01880 384 aa24.91■■□□□ 1.58
ARHGEF1-218ENST00000599589 BCAR3O75815 825 aa24.9■■□□□ 1.58
ARHGEF1-218ENST00000599589 SEC24BO95487 1268 aa24.9■■□□□ 1.58
ARHGEF1-218ENST00000599589 KNSTRNQ9Y448 316 aa24.9■■□□□ 1.58
ARHGEF1-218ENST00000599589 CEP152O94986 1710 aa24.89■■□□□ 1.58
ARHGEF1-218ENST00000599589 CLTCL1P53675 1640 aa24.89■■□□□ 1.57
ARHGEF1-218ENST00000599589 SLKQ9H2G2 1235 aaPredicted RBP24.89■■□□□ 1.57
ARHGEF1-218ENST00000599589 SPINK5Q9NQ38 1064 aaPredicted RBP24.89■■□□□ 1.57
ARHGEF1-218ENST00000599589 CCDC146Q8IYE0 955 aa24.88■■□□□ 1.57
ARHGEF1-218ENST00000599589 MLH3Q9UHC1 1453 aa24.88■■□□□ 1.57
ARHGEF1-218ENST00000599589 TRMT2AQ8IZ69 625 aaKnown RBP24.87■■□□□ 1.57
ARHGEF1-218ENST00000599589 BECN1Q14457 450 aa24.86■■□□□ 1.57
ARHGEF1-218ENST00000599589 RRAGDQ9NQL2 400 aaPredicted RBP24.86■■□□□ 1.57
ARHGEF1-218ENST00000599589 NKTRP30414 1462 aaKnown RBP24.85■■□□□ 1.57
ARHGEF1-218ENST00000599589 MADDQ8WXG6 1647 aa24.84■■□□□ 1.57
ARHGEF1-218ENST00000599589 RNF17Q9BXT8 1623 aaKnown RBP24.84■■□□□ 1.57
ARHGEF1-218ENST00000599589 AMER1Q5JTC6 1135 aaPredicted RBP24.83■■□□□ 1.57
ARHGEF1-218ENST00000599589 NEO1Q92859 1461 aa24.83■■□□□ 1.57
ARHGEF1-218ENST00000599589 NEURL4Q96JN8 1562 aa24.83■■□□□ 1.57
ARHGEF1-218ENST00000599589 LMTK2Q8IWU2 1503 aa24.83■■□□□ 1.57
ARHGEF1-218ENST00000599589 EFCAB6Q5THR3 1501 aa24.82■■□□□ 1.56
ARHGEF1-218ENST00000599589 L1TD1Q5T7N2 865 aaKnown RBP24.81■■□□□ 1.56
ARHGEF1-218ENST00000599589 HECW2Q9P2P5 1572 aa24.81■■□□□ 1.56
ARHGEF1-218ENST00000599589 APAF1O14727 1248 aa24.81■■□□□ 1.56
ARHGEF1-218ENST00000599589 MAPK8IP3Q9UPT6 1336 aa24.79■■□□□ 1.56
ARHGEF1-218ENST00000599589 NLRP1Q9C000 1473 aa24.78■■□□□ 1.56
ARHGEF1-218ENST00000599589 ANTXR1Q9H6X2 564 aa24.78■■□□□ 1.56
ARHGEF1-218ENST00000599589 FRMPD1Q5SYB0 1578 aa24.76■■□□□ 1.55
ARHGEF1-218ENST00000599589 CGNL1Q0VF96 1302 aa24.76■■□□□ 1.55
ARHGEF1-218ENST00000599589 ARXQ96QS3 562 aa24.76■■□□□ 1.55
ARHGEF1-218ENST00000599589 PPRC1Q5VV67 1664 aaKnown RBP24.76■■□□□ 1.55
ARHGEF1-218ENST00000599589 PIK3C2GO75747 1445 aa24.76■■□□□ 1.55
ARHGEF1-218ENST00000599589 CLUAP1Q96AJ1 413 aa24.76■■□□□ 1.55
ARHGEF1-218ENST00000599589 E9PSI1 815 aa24.75■■□□□ 1.55
ARHGEF1-218ENST00000599589 DMRT2Q9Y5R5 561 aa24.75■■□□□ 1.55
ARHGEF1-218ENST00000599589 PANK1Q8TE04 598 aa24.74■■□□□ 1.55
ARHGEF1-218ENST00000599589 COG6Q9Y2V7 657 aa24.74■■□□□ 1.55
ARHGEF1-218ENST00000599589 ASXL1Q8IXJ9 1541 aa24.74■■□□□ 1.55
ARHGEF1-218ENST00000599589 RAPGEF3O95398 923 aa24.74■■□□□ 1.55
ARHGEF1-218ENST00000599589 CYB5RLQ6IPT4 315 aa24.74■■□□□ 1.55
ARHGEF1-218ENST00000599589 GGT6Q6P531 493 aa24.74■■□□□ 1.55
ARHGEF1-218ENST00000599589 SCAF11Q99590 1463 aaKnown RBP24.73■■□□□ 1.55
ARHGEF1-218ENST00000599589 UGGT1Q9NYU2 1555 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms