RNA–Protein interactions for RNA: ENST00000598229.1

LINC00343-205, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-205ENST00000598229 LHX8Q68G74 356 aa15.08■□□□□ 0
LINC00343-205ENST00000598229 RNF17Q9BXT8 1623 aaKnown RBP15.06■□□□□ 0
LINC00343-205ENST00000598229 POTEAQ6S8J7 498 aa15.06■□□□□ 0
LINC00343-205ENST00000598229 FAM135BQ49AJ0 1406 aa15.06■□□□□ 0
LINC00343-205ENST00000598229 SYNMO15061 1565 aa15.05■□□□□ -0
LINC00343-205ENST00000598229 IQGAP1P46940 1657 aa15.05■□□□□ -0
LINC00343-205ENST00000598229 PLEKHG5O94827 1062 aa15.04■□□□□ -0
LINC00343-205ENST00000598229 STRCP1A6NGW2 1772 aa15.02□□□□□ -0.01
LINC00343-205ENST00000598229 GALR2O43603 387 aaPredicted RBP15.01□□□□□ -0.01
LINC00343-205ENST00000598229 PHF12Q96QT6 1004 aa15.01□□□□□ -0.01
LINC00343-205ENST00000598229 CCDC141Q6ZP82 1450 aa15.01□□□□□ -0.01
LINC00343-205ENST00000598229 TIAM1Q13009 1591 aa15□□□□□ -0.01
LINC00343-205ENST00000598229 CEP162Q5TB80 1403 aa15□□□□□ -0.01
LINC00343-205ENST00000598229 TSPY4P0CV99 314 aa14.99□□□□□ -0.01
LINC00343-205ENST00000598229 TSPY10P0CW01 314 aa14.99□□□□□ -0.01
LINC00343-205ENST00000598229 TXNDC2Q86VQ3 553 aa14.99□□□□□ -0.01
LINC00343-205ENST00000598229 SCAF11Q99590 1463 aaKnown RBP14.98□□□□□ -0.01
LINC00343-205ENST00000598229 LTKP29376 864 aa14.98□□□□□ -0.01
LINC00343-205ENST00000598229 ERVK-7P63135 1459 aa14.96□□□□□ -0.01
LINC00343-205ENST00000598229 EID1Q9Y6B2 187 aa14.96□□□□□ -0.01
LINC00343-205ENST00000598229 ZC3H13Q5T200 1668 aaKnown RBP14.96□□□□□ -0.01
LINC00343-205ENST00000598229 ARHGAP23Q9P227 1491 aa14.95□□□□□ -0.02
LINC00343-205ENST00000598229 MIER1Q8N108 512 aa14.95□□□□□ -0.02
LINC00343-205ENST00000598229 ABCC3O15438 1527 aa14.95□□□□□ -0.02
LINC00343-205ENST00000598229 SLIT1O75093 1534 aa14.94□□□□□ -0.02
LINC00343-205ENST00000598229 EHBP1L1Q8N3D4 1523 aa14.94□□□□□ -0.02
LINC00343-205ENST00000598229 NCOA2Q15596 1464 aa14.94□□□□□ -0.02
LINC00343-205ENST00000598229 KCNA6P17658 529 aa14.93□□□□□ -0.02
LINC00343-205ENST00000598229 TMEM94Q12767 1356 aa14.92□□□□□ -0.02
LINC00343-205ENST00000598229 CAMSAP2Q08AD1 1489 aa14.92□□□□□ -0.02
LINC00343-205ENST00000598229 ARHGEF5Q12774 1597 aa14.9□□□□□ -0.02
LINC00343-205ENST00000598229 ARHGAP31Q2M1Z3 1444 aa14.9□□□□□ -0.02
LINC00343-205ENST00000598229 UBR1Q8IWV7 1749 aa14.89□□□□□ -0.03
LINC00343-205ENST00000598229 PROSER2Q86WR7 435 aaPredicted RBP14.89□□□□□ -0.03
LINC00343-205ENST00000598229 TSPYL2Q9H2G4 693 aaPredicted RBP14.89□□□□□ -0.03
LINC00343-205ENST00000598229 LRRC9Q6ZRR7 1453 aa14.89□□□□□ -0.03
LINC00343-205ENST00000598229 TMEM2Q9UHN6 1383 aa14.88□□□□□ -0.03
LINC00343-205ENST00000598229 XIRP1Q702N8 1843 aaKnown RBP14.88□□□□□ -0.03
LINC00343-205ENST00000598229 FKBP8Q14318 412 aa14.88□□□□□ -0.03
LINC00343-205ENST00000598229 UPF1Q92900 1129 aaKnown RBP eCLIP14.88□□□□□ -0.03
LINC00343-205ENST00000598229 JCADQ9P266 1359 aa14.87□□□□□ -0.03
LINC00343-205ENST00000598229 SLAIN2Q9P270 581 aa14.87□□□□□ -0.03
LINC00343-205ENST00000598229 EIF2AK4Q9P2K8 1649 aaKnown RBP14.85□□□□□ -0.03
LINC00343-205ENST00000598229 PLCD3Q8N3E9 789 aa14.85□□□□□ -0.03
LINC00343-205ENST00000598229 ROBO1Q9Y6N7 1651 aa14.84□□□□□ -0.03
LINC00343-205ENST00000598229 ZNF772Q68DY9 489 aaPredicted RBP14.84□□□□□ -0.03
LINC00343-205ENST00000598229 MAST1Q9Y2H9 1570 aa14.84□□□□□ -0.03
LINC00343-205ENST00000598229 MS4A3Q96HJ5 214 aa14.83□□□□□ -0.04
LINC00343-205ENST00000598229 ZBTB47Q9UFB7 747 aaPredicted RBP14.83□□□□□ -0.04
LINC00343-205ENST00000598229 CCDC61Q9Y6R9 512 aa14.83□□□□□ -0.04
LINC00343-205ENST00000598229 MROH1Q8NDA8 1641 aa14.83□□□□□ -0.04
LINC00343-205ENST00000598229 SPATA31A6Q5VVP1 1343 aa14.83□□□□□ -0.04
LINC00343-205ENST00000598229 PRDM15P57071 1507 aaPredicted RBP14.82□□□□□ -0.04
LINC00343-205ENST00000598229 MAP3K1Q13233 1512 aa14.82□□□□□ -0.04
LINC00343-205ENST00000598229 SLC26A8Q96RN1 970 aa14.82□□□□□ -0.04
LINC00343-205ENST00000598229 MSH6P52701 1360 aa14.82□□□□□ -0.04
LINC00343-205ENST00000598229 TET3O43151 1660 aa14.81□□□□□ -0.04
LINC00343-205ENST00000598229 NKTRP30414 1462 aaKnown RBP14.81□□□□□ -0.04
LINC00343-205ENST00000598229 IDI1Q13907 227 aa14.8□□□□□ -0.04
LINC00343-205ENST00000598229 RBM33Q96EV2 1170 aaKnown RBP14.8□□□□□ -0.04
LINC00343-205ENST00000598229 FGD6Q6ZV73 1430 aa14.79□□□□□ -0.04
LINC00343-205ENST00000598229 DUOX2Q9NRD8 1548 aa14.79□□□□□ -0.04
LINC00343-205ENST00000598229 KDM5AP29375 1690 aaKnown RBP14.77□□□□□ -0.04
LINC00343-205ENST00000598229 EFCAB6Q5THR3 1501 aa14.77□□□□□ -0.04
LINC00343-205ENST00000598229 NCOA3Q9Y6Q9 1424 aa14.77□□□□□ -0.04
LINC00343-205ENST00000598229 RXRBP28702 533 aa14.77□□□□□ -0.05
LINC00343-205ENST00000598229 SETD1AO15047 1707 aaKnown RBP14.77□□□□□ -0.05
LINC00343-205ENST00000598229 MEX3CQ5U5Q3 659 aaKnown RBP14.76□□□□□ -0.05
LINC00343-205ENST00000598229 PIK3C2BO00750 1634 aa14.76□□□□□ -0.05
LINC00343-205ENST00000598229 CEP152O94986 1710 aa14.75□□□□□ -0.05
LINC00343-205ENST00000598229 CFAP65Q6ZU64 1925 aaKnown RBP14.75□□□□□ -0.05
LINC00343-205ENST00000598229 ASTLQ6HA08 431 aaPredicted RBP14.75□□□□□ -0.05
LINC00343-205ENST00000598229 TRIM52Q96A61 297 aa14.75□□□□□ -0.05
LINC00343-205ENST00000598229 SLC52A1Q9NWF4 448 aa14.75□□□□□ -0.05
LINC00343-205ENST00000598229 NWD1Q149M9 1564 aa14.75□□□□□ -0.05
LINC00343-205ENST00000598229 CDK12Q9NYV4 1490 aaPredicted RBP14.75□□□□□ -0.05
LINC00343-205ENST00000598229 PHLPP1O60346 1717 aa14.75□□□□□ -0.05
LINC00343-205ENST00000598229 MYOM3Q5VTT5 1437 aa14.75□□□□□ -0.05
LINC00343-205ENST00000598229 ERBINQ96RT1 1412 aa14.75□□□□□ -0.05
LINC00343-205ENST00000598229 KANK1Q14678 1352 aa14.74□□□□□ -0.05
LINC00343-205ENST00000598229 RASEFQ8IZ41 740 aa14.74□□□□□ -0.05
LINC00343-205ENST00000598229 KIF15Q9NS87 1388 aa14.73□□□□□ -0.05
LINC00343-205ENST00000598229 HDGFP51858 240 aaKnown RBP14.73□□□□□ -0.05
LINC00343-205ENST00000598229 KIF12Q96FN5 646 aa14.73□□□□□ -0.05
LINC00343-205ENST00000598229 LRP6O75581 1613 aa14.73□□□□□ -0.05
LINC00343-205ENST00000598229 BCANQ96GW7 911 aa14.72□□□□□ -0.05
LINC00343-205ENST00000598229 TBX22Q9Y458 520 aa14.72□□□□□ -0.05
LINC00343-205ENST00000598229 COL16A1Q07092 1604 aaPredicted RBP14.72□□□□□ -0.05
LINC00343-205ENST00000598229 CADPS2Q86UW7 1296 aa14.71□□□□□ -0.05
LINC00343-205ENST00000598229 C19orf44Q9H6X5 657 aa14.71□□□□□ -0.05
LINC00343-205ENST00000598229 RRP7BPQ9NSQ0 103 aa14.71□□□□□ -0.05
LINC00343-205ENST00000598229 NOS1P29475 1434 aa14.7□□□□□ -0.06
LINC00343-205ENST00000598229 ATMINO43313 823 aaPredicted RBP14.7□□□□□ -0.06
LINC00343-205ENST00000598229 LMTK2Q8IWU2 1503 aa14.7□□□□□ -0.06
LINC00343-205ENST00000598229 PLEKHG1Q9ULL1 1385 aa14.7□□□□□ -0.06
LINC00343-205ENST00000598229 PELP1Q8IZL8 1130 aaKnown RBP14.68□□□□□ -0.06
LINC00343-205ENST00000598229 SLC39A7Q92504 469 aa14.68□□□□□ -0.06
LINC00343-205ENST00000598229 FBXO3Q9UK99 471 aa14.68□□□□□ -0.06
LINC00343-205ENST00000598229 ATF3P18847 181 aa14.67□□□□□ -0.06
LINC00343-205ENST00000598229 AHDC1Q5TGY3 1603 aaPredicted RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms