RNA–Protein interactions for RNA: ENST00000597777.1

FARP1-222, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

Gene FARP1, Length 3,841 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-222	ENST00000597777	FER1L4	A9Z1Z3	1794 aa		13.46	□□□□□ -0.26
FARP1-222	ENST00000597777	MADD	Q8WXG6	1647 aa		13.46	□□□□□ -0.26
FARP1-222	ENST00000597777	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.45	□□□□□ -0.26
FARP1-222	ENST00000597777	SLC52A1	Q9NWF4	448 aa		13.45	□□□□□ -0.26
FARP1-222	ENST00000597777	KIAA1210	Q9ULL0	1709 aa		13.45	□□□□□ -0.26
FARP1-222	ENST00000597777	MRS2	Q9HD23	443 aa		13.44	□□□□□ -0.26
FARP1-222	ENST00000597777	KDM5A	P29375	1690 aa	Known RBP	13.44	□□□□□ -0.26
FARP1-222	ENST00000597777	PPL	O60437	1756 aa		13.44	□□□□□ -0.26
FARP1-222	ENST00000597777	NBPF8	Q3BBV2	869 aa		13.43	□□□□□ -0.26
FARP1-222	ENST00000597777	CFAP65	Q6ZU64	1925 aa	Known RBP	13.43	□□□□□ -0.26
FARP1-222	ENST00000597777	TMEM131L	A2VDJ0	1609 aa		13.43	□□□□□ -0.26
FARP1-222	ENST00000597777	ARID4B	Q4LE39	1312 aa	Predicted RBP	13.43	□□□□□ -0.26
FARP1-222	ENST00000597777	DCAF11	Q8TEB1	546 aa		13.43	□□□□□ -0.26
FARP1-222	ENST00000597777	NRXN1	Q9ULB1	1477 aa		13.42	□□□□□ -0.26
FARP1-222	ENST00000597777	ESF1	Q9H501	851 aa	Known RBP	13.42	□□□□□ -0.26
FARP1-222	ENST00000597777	ZMYM3	Q14202	1370 aa		13.42	□□□□□ -0.26
FARP1-222	ENST00000597777	RPGRIP1L	Q68CZ1	1315 aa		13.42	□□□□□ -0.26
FARP1-222	ENST00000597777	CHGA	P10645	457 aa	Known RBP	13.42	□□□□□ -0.26
FARP1-222	ENST00000597777	GPRASP1	Q5JY77	1395 aa		13.4	□□□□□ -0.26
FARP1-222	ENST00000597777	C3	P01024	1663 aa		13.4	□□□□□ -0.26
FARP1-222	ENST00000597777	ADAMTSL3	P82987	1691 aa		13.39	□□□□□ -0.27
FARP1-222	ENST00000597777	MLEC	Q14165	292 aa		13.39	□□□□□ -0.27
FARP1-222	ENST00000597777	NEXMIF	Q5QGS0	1516 aa		13.39	□□□□□ -0.27
FARP1-222	ENST00000597777	ZFYVE9	O95405	1425 aa		13.38	□□□□□ -0.27
FARP1-222	ENST00000597777	POLR1A	O95602	1720 aa	Predicted RBP	13.38	□□□□□ -0.27
FARP1-222	ENST00000597777	MYO5B	Q9ULV0	1848 aa		13.37	□□□□□ -0.27
FARP1-222	ENST00000597777	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.36	□□□□□ -0.27
FARP1-222	ENST00000597777	NLRP1	Q9C000	1473 aa		13.36	□□□□□ -0.27
FARP1-222	ENST00000597777	IDI1	Q13907	227 aa		13.36	□□□□□ -0.27
FARP1-222	ENST00000597777	SETBP1	Q9Y6X0	1596 aa		13.35	□□□□□ -0.27
FARP1-222	ENST00000597777	TSHZ2	Q9NRE2	1034 aa		13.35	□□□□□ -0.27
FARP1-222	ENST00000597777	TNR	Q92752	1358 aa		13.35	□□□□□ -0.27
FARP1-222	ENST00000597777	FBXO31	Q5XUX0	539 aa	Predicted RBP	13.35	□□□□□ -0.27
FARP1-222	ENST00000597777	ROCK2	O75116	1388 aa	Known RBP	13.35	□□□□□ -0.27
FARP1-222	ENST00000597777	IQGAP1	P46940	1657 aa		13.34	□□□□□ -0.27
FARP1-222	ENST00000597777	PIK3C2G	O75747	1445 aa		13.34	□□□□□ -0.27
FARP1-222	ENST00000597777	A2ML1	A8K2U0	1454 aa		13.33	□□□□□ -0.27
FARP1-222	ENST00000597777	RIMS1	Q86UR5	1692 aa	Known RBP	13.33	□□□□□ -0.27
FARP1-222	ENST00000597777	NBR1	Q14596	966 aa		13.33	□□□□□ -0.27
FARP1-222	ENST00000597777	UBR1	Q8IWV7	1749 aa		13.33	□□□□□ -0.28
FARP1-222	ENST00000597777	USP47	Q96K76	1375 aa		13.33	□□□□□ -0.28
FARP1-222	ENST00000597777	HSPA5	P11021	654 aa	Known RBP	13.32	□□□□□ -0.28
FARP1-222	ENST00000597777	B4GALNT3	Q6L9W6	998 aa		13.31	□□□□□ -0.28
FARP1-222	ENST00000597777	CARD11	Q9BXL7	1154 aa		13.31	□□□□□ -0.28
FARP1-222	ENST00000597777	MYO3A	Q8NEV4	1616 aa		13.3	□□□□□ -0.28
FARP1-222	ENST00000597777	VGF	O15240	615 aa	Predicted RBP	13.3	□□□□□ -0.28
FARP1-222	ENST00000597777	TMC1	Q8TDI8	760 aa		13.3	□□□□□ -0.28
FARP1-222	ENST00000597777	ANP32E	Q9BTT0	268 aa		13.3	□□□□□ -0.28
FARP1-222	ENST00000597777	ADGRF5	Q8IZF2	1346 aa		13.29	□□□□□ -0.28
FARP1-222	ENST00000597777	SCAF11	Q99590	1463 aa	Known RBP	13.28	□□□□□ -0.28
FARP1-222	ENST00000597777	ZNF142	P52746	1687 aa	Predicted RBP	13.28	□□□□□ -0.28
FARP1-222	ENST00000597777	ADGRB1	O14514	1584 aa		13.27	□□□□□ -0.29
FARP1-222	ENST00000597777	PLEKHG5	O94827	1062 aa		13.27	□□□□□ -0.29
FARP1-222	ENST00000597777	RIMS2	Q9UQ26	1411 aa		13.26	□□□□□ -0.29
FARP1-222	ENST00000597777	EIF3A	Q14152	1382 aa	Known RBP	13.26	□□□□□ -0.29
FARP1-222	ENST00000597777	C14orf93	Q9H972	538 aa	Known RBP	13.26	□□□□□ -0.29
FARP1-222	ENST00000597777	SLIT1	O75093	1534 aa		13.25	□□□□□ -0.29
FARP1-222	ENST00000597777	NBPF1	Q3BBV0	1214 aa		13.25	□□□□□ -0.29
FARP1-222	ENST00000597777	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.25	□□□□□ -0.29
FARP1-222	ENST00000597777	STAG3	Q9UJ98	1225 aa		13.25	□□□□□ -0.29
FARP1-222	ENST00000597777	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	13.24	□□□□□ -0.29
FARP1-222	ENST00000597777	SETD1A	O15047	1707 aa	Known RBP	13.24	□□□□□ -0.29
FARP1-222	ENST00000597777	ARHGAP23	Q9P227	1491 aa		13.24	□□□□□ -0.29
FARP1-222	ENST00000597777	HDGF	P51858	240 aa	Known RBP	13.24	□□□□□ -0.29
FARP1-222	ENST00000597777	TMEM2	Q9UHN6	1383 aa		13.23	□□□□□ -0.29
FARP1-222	ENST00000597777	ALK	Q9UM73	1620 aa		13.22	□□□□□ -0.29
FARP1-222	ENST00000597777	TNNT2	P45379	298 aa	Predicted RBP	13.22	□□□□□ -0.29
FARP1-222	ENST00000597777	CCDC7	Q96M83	1385 aa		13.22	□□□□□ -0.29
FARP1-222	ENST00000597777	DAXX	Q9UER7	740 aa	Predicted RBP	13.22	□□□□□ -0.29
FARP1-222	ENST00000597777	NRXN3	Q9Y4C0	1643 aa		13.22	□□□□□ -0.29
FARP1-222	ENST00000597777	CFAP70	Q5T0N1	1121 aa		13.21	□□□□□ -0.29
FARP1-222	ENST00000597777	SLC24A1	O60721	1099 aa		13.21	□□□□□ -0.29
FARP1-222	ENST00000597777	CEBPA	P49715	358 aa	Predicted RBP	13.21	□□□□□ -0.29
FARP1-222	ENST00000597777	WASHC2A	Q641Q2	1341 aa		13.21	□□□□□ -0.29
FARP1-222	ENST00000597777	CC2D1B	Q5T0F9	858 aa	Known RBP	13.21	□□□□□ -0.3
FARP1-222	ENST00000597777	CCDC136	Q96JN2	1154 aa		13.21	□□□□□ -0.3
FARP1-222	ENST00000597777	ASXL1	Q8IXJ9	1541 aa		13.2	□□□□□ -0.3
FARP1-222	ENST00000597777	PTPRM	P28827	1452 aa		13.2	□□□□□ -0.3
FARP1-222	ENST00000597777	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.2	□□□□□ -0.3
FARP1-222	ENST00000597777	SETD1B	Q9UPS6	1966 aa	Known RBP	13.2	□□□□□ -0.3
FARP1-222	ENST00000597777	ST20-MTHFS	A0A0A6YYL1	179 aa		13.2	□□□□□ -0.3
FARP1-222	ENST00000597777	SBNO2	Q9Y2G9	1366 aa		13.2	□□□□□ -0.3
FARP1-222	ENST00000597777	NEUROD2	Q15784	382 aa		13.18	□□□□□ -0.3
FARP1-222	ENST00000597777	DIP2A	Q14689	1571 aa		13.18	□□□□□ -0.3
FARP1-222	ENST00000597777	KIF7	Q2M1P5	1343 aa		13.18	□□□□□ -0.3
FARP1-222	ENST00000597777	KNDC1	Q76NI1	1749 aa		13.18	□□□□□ -0.3
FARP1-222	ENST00000597777	PLEKHG1	Q9ULL1	1385 aa		13.18	□□□□□ -0.3
FARP1-222	ENST00000597777	DLC1	Q96QB1	1528 aa		13.18	□□□□□ -0.3
FARP1-222	ENST00000597777	ARX	Q96QS3	562 aa		13.17	□□□□□ -0.3
FARP1-222	ENST00000597777	TESK2	Q96S53	571 aa		13.17	□□□□□ -0.3
FARP1-222	ENST00000597777	QRICH2	Q9H0J4	1663 aa		13.17	□□□□□ -0.3
FARP1-222	ENST00000597777	THEMIS	Q8N1K5	641 aa	Predicted RBP	13.17	□□□□□ -0.3
FARP1-222	ENST00000597777	C11orf95	C9JLR9	678 aa	Predicted RBP	13.16	□□□□□ -0.3
FARP1-222	ENST00000597777	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.14	□□□□□ -0.31
FARP1-222	ENST00000597777	MED14	O60244	1454 aa		13.14	□□□□□ -0.31
FARP1-222	ENST00000597777	TMF1	P82094	1093 aa		13.14	□□□□□ -0.31
FARP1-222	ENST00000597777	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.14	□□□□□ -0.31
FARP1-222	ENST00000597777	CANX	P27824	592 aa	Known RBP	13.13	□□□□□ -0.31
FARP1-222	ENST00000597777	EID1	Q9Y6B2	187 aa		13.13	□□□□□ -0.31
FARP1-222	ENST00000597777	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.13	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms