RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 ATP7AQ04656 1500 aa20.26■□□□□ 0.83
ZNF541-205ENST00000595558 ADAMTS8Q9UP79 889 aa20.25■□□□□ 0.83
ZNF541-205ENST00000595558 BLMP54132 1417 aaPredicted RBP20.25■□□□□ 0.83
ZNF541-205ENST00000595558 LAS1LQ9Y4W2 734 aaKnown RBP20.24■□□□□ 0.83
ZNF541-205ENST00000595558 LAMC1P11047 1609 aa20.24■□□□□ 0.83
ZNF541-205ENST00000595558 CLTCL1P53675 1640 aa20.24■□□□□ 0.83
ZNF541-205ENST00000595558 RTEL1-TNFRSF6BF6WH68 1400 aa20.23■□□□□ 0.83
ZNF541-205ENST00000595558 TMEM132EQ6IEE7 984 aa20.23■□□□□ 0.83
ZNF541-205ENST00000595558 WASHC2CQ9Y4E1 1318 aa20.21■□□□□ 0.83
ZNF541-205ENST00000595558 KANK1Q14678 1352 aa20.21■□□□□ 0.83
ZNF541-205ENST00000595558 RTL5Q5HYW3 569 aaPredicted RBP20.21■□□□□ 0.83
ZNF541-205ENST00000595558 KNSTRNQ9Y448 316 aa20.2■□□□□ 0.82
ZNF541-205ENST00000595558 EIF2AK4Q9P2K8 1649 aaKnown RBP20.2■□□□□ 0.82
ZNF541-205ENST00000595558 PTPRTO14522 1441 aa20.19■□□□□ 0.82
ZNF541-205ENST00000595558 TRAK1Q9UPV9 953 aa20.19■□□□□ 0.82
ZNF541-205ENST00000595558 CD109Q6YHK3 1445 aa20.17■□□□□ 0.82
ZNF541-205ENST00000595558 PLEKHH1Q9ULM0 1364 aa20.17■□□□□ 0.82
ZNF541-205ENST00000595558 MS4A1P11836 297 aa20.17■□□□□ 0.82
ZNF541-205ENST00000595558 CYB5RLQ6IPT4 315 aa20.17■□□□□ 0.82
ZNF541-205ENST00000595558 ABCA9Q8IUA7 1624 aa20.17■□□□□ 0.82
ZNF541-205ENST00000595558 TRPM2O94759 1503 aa20.16■□□□□ 0.82
ZNF541-205ENST00000595558 AMER1Q5JTC6 1135 aaPredicted RBP20.16■□□□□ 0.82
ZNF541-205ENST00000595558 MADDQ8WXG6 1647 aa20.16■□□□□ 0.82
ZNF541-205ENST00000595558 PPP2R1AP30153 589 aa20.16■□□□□ 0.82
ZNF541-205ENST00000595558 TNNT2P45379 298 aaPredicted RBP20.16■□□□□ 0.82
ZNF541-205ENST00000595558 RNF17Q9BXT8 1623 aaKnown RBP20.16■□□□□ 0.82
ZNF541-205ENST00000595558 CCDC146Q8IYE0 955 aa20.15■□□□□ 0.82
ZNF541-205ENST00000595558 ZMYM4Q5VZL5 1548 aa20.15■□□□□ 0.82
ZNF541-205ENST00000595558 INO80Q9ULG1 1556 aaPredicted RBP20.14■□□□□ 0.82
ZNF541-205ENST00000595558 SAFB2Q14151 953 aaKnown RBP eCLIP20.14■□□□□ 0.81
ZNF541-205ENST00000595558 SPHKAPQ2M3C7 1700 aa20.13■□□□□ 0.81
ZNF541-205ENST00000595558 DUSP27Q5VZP5 1158 aa20.13■□□□□ 0.81
ZNF541-205ENST00000595558 CARD14Q9BXL6 1004 aa20.13■□□□□ 0.81
ZNF541-205ENST00000595558 MROH1Q8NDA8 1641 aa20.13■□□□□ 0.81
ZNF541-205ENST00000595558 NEFMP07197 916 aa20.12■□□□□ 0.81
ZNF541-205ENST00000595558 KIDINS220Q9ULH0 1771 aa20.12■□□□□ 0.81
ZNF541-205ENST00000595558 SCAF11Q99590 1463 aaKnown RBP20.11■□□□□ 0.81
ZNF541-205ENST00000595558 ARAP3Q8WWN8 1544 aa20.1■□□□□ 0.81
ZNF541-205ENST00000595558 INSRP06213 1382 aa20.1■□□□□ 0.81
ZNF541-205ENST00000595558 NOS1P29475 1434 aa20.1■□□□□ 0.81
ZNF541-205ENST00000595558 WDR43Q15061 677 aaKnown RBP eCLIP20.1■□□□□ 0.81
ZNF541-205ENST00000595558 SLC4A3P48751 1232 aa20.09■□□□□ 0.81
ZNF541-205ENST00000595558 KDM2BQ8NHM5 1336 aa20.09■□□□□ 0.81
ZNF541-205ENST00000595558 DEPDC5O75140 1603 aa20.08■□□□□ 0.81
ZNF541-205ENST00000595558 TET3O43151 1660 aa20.08■□□□□ 0.8
ZNF541-205ENST00000595558 IQGAP1P46940 1657 aa20.08■□□□□ 0.8
ZNF541-205ENST00000595558 SPINK5Q9NQ38 1064 aaPredicted RBP20.07■□□□□ 0.8
ZNF541-205ENST00000595558 SLC12A5Q9H2X9 1139 aa20.07■□□□□ 0.8
ZNF541-205ENST00000595558 NPATQ14207 1427 aa20.06■□□□□ 0.8
ZNF541-205ENST00000595558 ZNF521Q96K83 1311 aa20.06■□□□□ 0.8
ZNF541-205ENST00000595558 VWDEQ8N2E2 1590 aa20.06■□□□□ 0.8
ZNF541-205ENST00000595558 ZNF518AQ6AHZ1 1483 aa20.06■□□□□ 0.8
ZNF541-205ENST00000595558 PPRC1Q5VV67 1664 aaKnown RBP20.05■□□□□ 0.8
ZNF541-205ENST00000595558 CEP152O94986 1710 aa20.05■□□□□ 0.8
ZNF541-205ENST00000595558 GOLGA2Q08379 1002 aa20.05■□□□□ 0.8
ZNF541-205ENST00000595558 STK26Q9P289 416 aa20.04■□□□□ 0.8
ZNF541-205ENST00000595558 POGZQ7Z3K3 1410 aa20.02■□□□□ 0.8
ZNF541-205ENST00000595558 MROH2AA6NES4 1674 aa20.02■□□□□ 0.79
ZNF541-205ENST00000595558 IL27Q8NEV9 243 aa20.01■□□□□ 0.79
ZNF541-205ENST00000595558 FRMPD1Q5SYB0 1578 aa20.01■□□□□ 0.79
ZNF541-205ENST00000595558 SLFN5Q08AF3 891 aa20.01■□□□□ 0.79
ZNF541-205ENST00000595558 EFCAB6Q5THR3 1501 aa20■□□□□ 0.79
ZNF541-205ENST00000595558 APAF1O14727 1248 aa20■□□□□ 0.79
ZNF541-205ENST00000595558 FBXO31Q5XUX0 539 aaPredicted RBP20■□□□□ 0.79
ZNF541-205ENST00000595558 DMRT2Q9Y5R5 561 aa20■□□□□ 0.79
ZNF541-205ENST00000595558 ERVK-7P63135 1459 aa20■□□□□ 0.79
ZNF541-205ENST00000595558 ABCA6Q8N139 1617 aa20■□□□□ 0.79
ZNF541-205ENST00000595558 MYOM1P52179 1685 aa19.99■□□□□ 0.79
ZNF541-205ENST00000595558 SYNMO15061 1565 aa19.99■□□□□ 0.79
ZNF541-205ENST00000595558 BCAR3O75815 825 aa19.99■□□□□ 0.79
ZNF541-205ENST00000595558 RGS3P49796 1198 aa19.99■□□□□ 0.79
ZNF541-205ENST00000595558 IDI1Q13907 227 aa19.99■□□□□ 0.79
ZNF541-205ENST00000595558 CDCA8Q53HL2 280 aa19.99■□□□□ 0.79
ZNF541-205ENST00000595558 CENPQQ7L2Z9 268 aaPredicted RBP19.99■□□□□ 0.79
ZNF541-205ENST00000595558 ASXL1Q8IXJ9 1541 aa19.99■□□□□ 0.79
ZNF541-205ENST00000595558 C8orf34Q49A92 452 aa19.98■□□□□ 0.79
ZNF541-205ENST00000595558 YEATS2Q9ULM3 1422 aa19.98■□□□□ 0.79
ZNF541-205ENST00000595558 NEUROD2Q15784 382 aa19.98■□□□□ 0.79
ZNF541-205ENST00000595558 CENPJQ9HC77 1338 aaPredicted RBP19.98■□□□□ 0.79
ZNF541-205ENST00000595558 EIF3AQ14152 1382 aaKnown RBP19.96■□□□□ 0.79
ZNF541-205ENST00000595558 MAP3K4Q9Y6R4 1608 aa19.95■□□□□ 0.78
ZNF541-205ENST00000595558 PPM1GO15355 546 aaPredicted RBP19.95■□□□□ 0.78
ZNF541-205ENST00000595558 C14orf93Q9H972 538 aaKnown RBP19.95■□□□□ 0.78
ZNF541-205ENST00000595558 CABP2Q9NPB3 220 aa19.95■□□□□ 0.78
ZNF541-205ENST00000595558 RRP7AQ9Y3A4 280 aaKnown RBP19.95■□□□□ 0.78
ZNF541-205ENST00000595558 MLECQ14165 292 aa19.94■□□□□ 0.78
ZNF541-205ENST00000595558 TRMT2AQ8IZ69 625 aaKnown RBP19.94■□□□□ 0.78
ZNF541-205ENST00000595558 DDRGK1Q96HY6 314 aa19.94■□□□□ 0.78
ZNF541-205ENST00000595558 RTN4Q9NQC3 1192 aaKnown RBP19.94■□□□□ 0.78
ZNF541-205ENST00000595558 PIK3C2GO75747 1445 aa19.94■□□□□ 0.78
ZNF541-205ENST00000595558 USP35Q9P2H5 1018 aa19.94■□□□□ 0.78
ZNF541-205ENST00000595558 FAM69CQ0P6D2 419 aa19.93■□□□□ 0.78
ZNF541-205ENST00000595558 FAM161AQ3B820 660 aa19.93■□□□□ 0.78
ZNF541-205ENST00000595558 STAC3Q96MF2 364 aa19.92■□□□□ 0.78
ZNF541-205ENST00000595558 KIF1BO60333 1816 aa19.92■□□□□ 0.78
ZNF541-205ENST00000595558 NFKBIBQ15653 356 aa19.91■□□□□ 0.78
ZNF541-205ENST00000595558 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.91■□□□□ 0.78
ZNF541-205ENST00000595558 MLH3Q9UHC1 1453 aa19.9■□□□□ 0.78
ZNF541-205ENST00000595558 IGHDP01880 384 aa19.9■□□□□ 0.78
ZNF541-205ENST00000595558 KDM5AP29375 1690 aaKnown RBP19.89■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms