RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 ERBINQ96RT1 1412 aa14.66□□□□□ -0.06
BRCA1-226ENST00000591534 ARHGAP31Q2M1Z3 1444 aa14.66□□□□□ -0.06
BRCA1-226ENST00000591534 TXNDC2Q86VQ3 553 aa14.65□□□□□ -0.06
BRCA1-226ENST00000591534 VWDEQ8N2E2 1590 aa14.64□□□□□ -0.07
BRCA1-226ENST00000591534 ANKRD30AQ9BXX3 1397 aa14.63□□□□□ -0.07
BRCA1-226ENST00000591534 ABCC5O15440 1437 aa14.63□□□□□ -0.07
BRCA1-226ENST00000591534 SCAF11Q99590 1463 aaKnown RBP14.63□□□□□ -0.07
BRCA1-226ENST00000591534 IQGAP1P46940 1657 aa14.62□□□□□ -0.07
BRCA1-226ENST00000591534 SLC24A1O60721 1099 aa14.62□□□□□ -0.07
BRCA1-226ENST00000591534 DAPK1P53355 1430 aa14.6□□□□□ -0.07
BRCA1-226ENST00000591534 PRDM15P57071 1507 aaPredicted RBP14.6□□□□□ -0.07
BRCA1-226ENST00000591534 MROH1Q8NDA8 1641 aa14.59□□□□□ -0.07
BRCA1-226ENST00000591534 FGD6Q6ZV73 1430 aa14.59□□□□□ -0.07
BRCA1-226ENST00000591534 LRRC7Q96NW7 1537 aa14.59□□□□□ -0.07
BRCA1-226ENST00000591534 PTPN23Q9H3S7 1636 aa14.59□□□□□ -0.07
BRCA1-226ENST00000591534 SLIT1O75093 1534 aa14.58□□□□□ -0.08
BRCA1-226ENST00000591534 LTKP29376 864 aa14.58□□□□□ -0.08
BRCA1-226ENST00000591534 CHIC2Q9UKJ5 165 aa14.58□□□□□ -0.08
BRCA1-226ENST00000591534 ARHGAP23Q9P227 1491 aa14.57□□□□□ -0.08
BRCA1-226ENST00000591534 SYNMO15061 1565 aa14.57□□□□□ -0.08
BRCA1-226ENST00000591534 SLC52A1Q9NWF4 448 aa14.57□□□□□ -0.08
BRCA1-226ENST00000591534 TMEM2Q9UHN6 1383 aa14.57□□□□□ -0.08
BRCA1-226ENST00000591534 HDGFP51858 240 aaKnown RBP14.56□□□□□ -0.08
BRCA1-226ENST00000591534 RBM42Q9BTD8 480 aaKnown RBP14.56□□□□□ -0.08
BRCA1-226ENST00000591534 IDI1Q13907 227 aa14.55□□□□□ -0.08
BRCA1-226ENST00000591534 CEP152O94986 1710 aa14.55□□□□□ -0.08
BRCA1-226ENST00000591534 UBR1Q8IWV7 1749 aa14.55□□□□□ -0.08
BRCA1-226ENST00000591534 FAM50AQ14320 339 aaKnown RBP14.54□□□□□ -0.08
BRCA1-226ENST00000591534 BCANQ96GW7 911 aa14.54□□□□□ -0.08
BRCA1-226ENST00000591534 LMTK2Q8IWU2 1503 aa14.54□□□□□ -0.08
BRCA1-226ENST00000591534 MED1Q15648 1581 aaPredicted RBP14.54□□□□□ -0.08
BRCA1-226ENST00000591534 KCNA6P17658 529 aa14.53□□□□□ -0.08
BRCA1-226ENST00000591534 CROCC2H7BZ55 1655 aa14.52□□□□□ -0.08
BRCA1-226ENST00000591534 EFCAB6Q5THR3 1501 aa14.52□□□□□ -0.08
BRCA1-226ENST00000591534 PROSER2Q86WR7 435 aaPredicted RBP14.5□□□□□ -0.09
BRCA1-226ENST00000591534 KLHL34Q8N239 644 aa14.5□□□□□ -0.09
BRCA1-226ENST00000591534 SLC26A8Q96RN1 970 aa14.49□□□□□ -0.09
BRCA1-226ENST00000591534 ADGRL2O95490 1459 aa14.49□□□□□ -0.09
BRCA1-226ENST00000591534 ANKRD50Q9ULJ7 1429 aa14.49□□□□□ -0.09
BRCA1-226ENST00000591534 KDM5AP29375 1690 aaKnown RBP14.49□□□□□ -0.09
BRCA1-226ENST00000591534 PPP1R15AO75807 674 aaPredicted RBP14.48□□□□□ -0.09
BRCA1-226ENST00000591534 RPRD2Q5VT52 1461 aaKnown RBP14.48□□□□□ -0.09
BRCA1-226ENST00000591534 CFAP65Q6ZU64 1925 aaKnown RBP14.48□□□□□ -0.09
BRCA1-226ENST00000591534 NOS1P29475 1434 aa14.48□□□□□ -0.09
BRCA1-226ENST00000591534 FAM135BQ49AJ0 1406 aa14.48□□□□□ -0.09
BRCA1-226ENST00000591534 PIK3C2BO00750 1634 aa14.48□□□□□ -0.09
BRCA1-226ENST00000591534 ALKQ9UM73 1620 aa14.48□□□□□ -0.09
BRCA1-226ENST00000591534 TMEM94Q12767 1356 aa14.47□□□□□ -0.09
BRCA1-226ENST00000591534 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.46□□□□□ -0.09
BRCA1-226ENST00000591534 STRCP1A6NGW2 1772 aa14.46□□□□□ -0.09
BRCA1-226ENST00000591534 PLCD3Q8N3E9 789 aa14.45□□□□□ -0.1
BRCA1-226ENST00000591534 ADGRB3O60242 1522 aa14.44□□□□□ -0.1
BRCA1-226ENST00000591534 MSH6P52701 1360 aa14.44□□□□□ -0.1
BRCA1-226ENST00000591534 MIER1Q8N108 512 aa14.43□□□□□ -0.1
BRCA1-226ENST00000591534 NKTRP30414 1462 aaKnown RBP14.43□□□□□ -0.1
BRCA1-226ENST00000591534 CHGAP10645 457 aaKnown RBP14.42□□□□□ -0.1
BRCA1-226ENST00000591534 PLEKHG1Q9ULL1 1385 aa14.42□□□□□ -0.1
BRCA1-226ENST00000591534 TBX22Q9Y458 520 aa14.41□□□□□ -0.1
BRCA1-226ENST00000591534 TET3O43151 1660 aa14.41□□□□□ -0.1
BRCA1-226ENST00000591534 SLAIN2Q9P270 581 aa14.4□□□□□ -0.1
BRCA1-226ENST00000591534 RIMS2Q9UQ26 1411 aa14.4□□□□□ -0.1
BRCA1-226ENST00000591534 ROCK1Q13464 1354 aa14.39□□□□□ -0.11
BRCA1-226ENST00000591534 C14orf37Q86TY3 774 aa14.39□□□□□ -0.11
BRCA1-226ENST00000591534 SPOCK2Q92563 424 aa14.39□□□□□ -0.11
BRCA1-226ENST00000591534 RBM33Q96EV2 1170 aaKnown RBP14.38□□□□□ -0.11
BRCA1-226ENST00000591534 NCOA3Q9Y6Q9 1424 aa14.38□□□□□ -0.11
BRCA1-226ENST00000591534 ZFYVE9O95405 1425 aa14.37□□□□□ -0.11
BRCA1-226ENST00000591534 CHRDL2Q6WN34 429 aa14.36□□□□□ -0.11
BRCA1-226ENST00000591534 CADPS2Q86UW7 1296 aa14.36□□□□□ -0.11
BRCA1-226ENST00000591534 NWD1Q149M9 1564 aa14.35□□□□□ -0.11
BRCA1-226ENST00000591534 ATF3P18847 181 aa14.35□□□□□ -0.11
BRCA1-226ENST00000591534 NUP155O75694 1391 aa14.34□□□□□ -0.11
BRCA1-226ENST00000591534 PIK3R4Q99570 1358 aa14.34□□□□□ -0.11
BRCA1-226ENST00000591534 C19orf44Q9H6X5 657 aa14.34□□□□□ -0.11
BRCA1-226ENST00000591534 RGS17Q9UGC6 210 aaPredicted RBP14.34□□□□□ -0.11
BRCA1-226ENST00000591534 JCADQ9P266 1359 aa14.34□□□□□ -0.11
BRCA1-226ENST00000591534 XIRP1Q702N8 1843 aaKnown RBP14.33□□□□□ -0.12
BRCA1-226ENST00000591534 ITGAEP38570 1179 aa14.32□□□□□ -0.12
BRCA1-226ENST00000591534 ROBO1Q9Y6N7 1651 aa14.32□□□□□ -0.12
BRCA1-226ENST00000591534 UNC13BO14795 1591 aa14.31□□□□□ -0.12
BRCA1-226ENST00000591534 TMEM131LA2VDJ0 1609 aa14.3□□□□□ -0.12
BRCA1-226ENST00000591534 GCC2Q8IWJ2 1684 aa14.3□□□□□ -0.12
BRCA1-226ENST00000591534 NUTM2DQ5VT03 806 aaPredicted RBP14.3□□□□□ -0.12
BRCA1-226ENST00000591534 DIP2AQ14689 1571 aa14.3□□□□□ -0.12
BRCA1-226ENST00000591534 PPARGC1BQ86YN6 1023 aaKnown RBP14.29□□□□□ -0.12
BRCA1-226ENST00000591534 AMOTL2Q9Y2J4 779 aa14.29□□□□□ -0.12
BRCA1-226ENST00000591534 SPATA31A6Q5VVP1 1343 aa14.29□□□□□ -0.12
BRCA1-226ENST00000591534 ZNF326Q5BKZ1 582 aaKnown RBP14.28□□□□□ -0.12
BRCA1-226ENST00000591534 MEX3CQ5U5Q3 659 aaKnown RBP14.28□□□□□ -0.12
BRCA1-226ENST00000591534 POTEAQ6S8J7 498 aa14.28□□□□□ -0.12
BRCA1-226ENST00000591534 ADAMTS13Q76LX8 1427 aa14.27□□□□□ -0.12
BRCA1-226ENST00000591534 IQGAP3Q86VI3 1631 aa14.26□□□□□ -0.13
BRCA1-226ENST00000591534 ZNF772Q68DY9 489 aaPredicted RBP14.26□□□□□ -0.13
BRCA1-226ENST00000591534 AKT1S1Q96B36 256 aa14.26□□□□□ -0.13
BRCA1-226ENST00000591534 TRPM2O94759 1503 aa14.25□□□□□ -0.13
BRCA1-226ENST00000591534 CHD2O14647 1828 aaKnown RBP14.25□□□□□ -0.13
BRCA1-226ENST00000591534 E9PCH4 1651 aa14.24□□□□□ -0.13
BRCA1-226ENST00000591534 PHLPP1O60346 1717 aa14.24□□□□□ -0.13
BRCA1-226ENST00000591534 DCCP43146 1447 aa14.23□□□□□ -0.13
BRCA1-226ENST00000591534 ECM2O94769 699 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms