RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 ROCK1Q13464 1354 aa19.32■□□□□ 0.68
CIRBP-228ENST00000590347 RPRD2Q5VT52 1461 aaKnown RBP19.32■□□□□ 0.68
CIRBP-228ENST00000590347 ABCA8O94911 1581 aa19.31■□□□□ 0.68
CIRBP-228ENST00000590347 MFAP1P55081 439 aaKnown RBP19.31■□□□□ 0.68
CIRBP-228ENST00000590347 DUSP27Q5VZP5 1158 aa19.31■□□□□ 0.68
CIRBP-228ENST00000590347 SPINK5Q9NQ38 1064 aaPredicted RBP19.31■□□□□ 0.68
CIRBP-228ENST00000590347 DNMT1P26358 1616 aaKnown RBP19.31■□□□□ 0.68
CIRBP-228ENST00000590347 ANKRD50Q9ULJ7 1429 aa19.3■□□□□ 0.68
CIRBP-228ENST00000590347 BCL11BQ9C0K0 894 aaPredicted RBP19.3■□□□□ 0.68
CIRBP-228ENST00000590347 UPF2Q9HAU5 1272 aaKnown RBP19.3■□□□□ 0.68
CIRBP-228ENST00000590347 CANXP27824 592 aaKnown RBP19.29■□□□□ 0.68
CIRBP-228ENST00000590347 AEBP2Q6ZN18 517 aaPredicted RBP19.29■□□□□ 0.68
CIRBP-228ENST00000590347 JARID2Q92833 1246 aaPredicted RBP19.29■□□□□ 0.68
CIRBP-228ENST00000590347 RGL3Q3MIN7 710 aa19.29■□□□□ 0.68
CIRBP-228ENST00000590347 PLEKHH1Q9ULM0 1364 aa19.28■□□□□ 0.68
CIRBP-228ENST00000590347 XPCQ01831 940 aaPredicted RBP19.28■□□□□ 0.68
CIRBP-228ENST00000590347 C9orf84Q5VXU9 1444 aa19.27■□□□□ 0.68
CIRBP-228ENST00000590347 GCC2Q8IWJ2 1684 aa19.27■□□□□ 0.68
CIRBP-228ENST00000590347 TNNQ9UQP3 1299 aa19.25■□□□□ 0.67
CIRBP-228ENST00000590347 ABCC10Q5T3U5 1492 aa19.25■□□□□ 0.67
CIRBP-228ENST00000590347 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.25■□□□□ 0.67
CIRBP-228ENST00000590347 BBXQ8WY36 941 aaPredicted RBP19.25■□□□□ 0.67
CIRBP-228ENST00000590347 TBC1D32Q96NH3 1257 aa19.24■□□□□ 0.67
CIRBP-228ENST00000590347 TSC1Q92574 1164 aa19.23■□□□□ 0.67
CIRBP-228ENST00000590347 BCL2L13Q9BXK5 485 aa19.23■□□□□ 0.67
CIRBP-228ENST00000590347 PZPP20742 1482 aa19.23■□□□□ 0.67
CIRBP-228ENST00000590347 MSNP26038 577 aaKnown RBP19.23■□□□□ 0.67
CIRBP-228ENST00000590347 CLUAP1Q96AJ1 413 aa19.23■□□□□ 0.67
CIRBP-228ENST00000590347 CHMP5Q9NZZ3 219 aa19.23■□□□□ 0.67
CIRBP-228ENST00000590347 UQCRHLA0A096LP55 91 aa19.22■□□□□ 0.67
CIRBP-228ENST00000590347 UQCRHP07919 91 aa19.22■□□□□ 0.67
CIRBP-228ENST00000590347 GOLGA2Q08379 1002 aa19.22■□□□□ 0.67
CIRBP-228ENST00000590347 MAPK8IP2Q13387 824 aaPredicted RBP19.22■□□□□ 0.67
CIRBP-228ENST00000590347 PANK3Q9H999 370 aa19.21■□□□□ 0.67
CIRBP-228ENST00000590347 DMRT2Q9Y5R5 561 aa19.21■□□□□ 0.67
CIRBP-228ENST00000590347 WDR43Q15061 677 aaKnown RBP eCLIP19.2■□□□□ 0.66
CIRBP-228ENST00000590347 MPNDQ8N594 471 aa19.2■□□□□ 0.66
CIRBP-228ENST00000590347 AFAP1Q8N556 730 aa19.2■□□□□ 0.66
CIRBP-228ENST00000590347 CHMP4BQ9H444 224 aaKnown RBP19.19■□□□□ 0.66
CIRBP-228ENST00000590347 FAM177BA6PVY3 158 aa19.18■□□□□ 0.66
CIRBP-228ENST00000590347 IGSF3O75054 1194 aa19.18■□□□□ 0.66
CIRBP-228ENST00000590347 ARHGAP5Q13017 1502 aa19.18■□□□□ 0.66
CIRBP-228ENST00000590347 NEUROD2Q15784 382 aa19.18■□□□□ 0.66
CIRBP-228ENST00000590347 CDC42BPAQ5VT25 1732 aa19.18■□□□□ 0.66
CIRBP-228ENST00000590347 NCLP19338 710 aaKnown RBP19.18■□□□□ 0.66
CIRBP-228ENST00000590347 CENPJQ9HC77 1338 aaPredicted RBP19.17■□□□□ 0.66
CIRBP-228ENST00000590347 ROCK2O75116 1388 aaKnown RBP19.17■□□□□ 0.66
CIRBP-228ENST00000590347 NASPP49321 788 aaPredicted RBP19.17■□□□□ 0.66
CIRBP-228ENST00000590347 PDZRN3Q9UPQ7 1066 aa19.17■□□□□ 0.66
CIRBP-228ENST00000590347 ITSN2Q9NZM3 1697 aa19.17■□□□□ 0.66
CIRBP-228ENST00000590347 OFD1O75665 1012 aa19.17■□□□□ 0.66
CIRBP-228ENST00000590347 TNPO1Q92973 898 aaKnown RBP19.17■□□□□ 0.66
CIRBP-228ENST00000590347 NLRP1Q9C000 1473 aa19.16■□□□□ 0.66
CIRBP-228ENST00000590347 ZSCAN30Q86W11 494 aa19.16■□□□□ 0.66
CIRBP-228ENST00000590347 VGLL3A8MV65 326 aa19.16■□□□□ 0.66
CIRBP-228ENST00000590347 APAF1O14727 1248 aa19.16■□□□□ 0.66
CIRBP-228ENST00000590347 NBPF1Q3BBV0 1214 aa19.16■□□□□ 0.66
CIRBP-228ENST00000590347 C22orf23Q9BZE7 217 aa19.15■□□□□ 0.66
CIRBP-228ENST00000590347 KIAA1107Q9UPP5 1409 aa19.15■□□□□ 0.66
CIRBP-228ENST00000590347 PER1O15534 1290 aaPredicted RBP19.15■□□□□ 0.66
CIRBP-228ENST00000590347 PARD3Q8TEW0 1356 aa19.15■□□□□ 0.66
CIRBP-228ENST00000590347 PCDHB15Q9Y5E8 787 aa19.14■□□□□ 0.66
CIRBP-228ENST00000590347 MBD5Q9P267 1494 aa19.14■□□□□ 0.65
CIRBP-228ENST00000590347 SYCP2Q9BX26 1530 aa19.13■□□□□ 0.65
CIRBP-228ENST00000590347 DDX11L8A8MPP1 907 aa19.12■□□□□ 0.65
CIRBP-228ENST00000590347 CBX1P83916 185 aa19.12■□□□□ 0.65
CIRBP-228ENST00000590347 HSCBQ8IWL3 235 aa19.12■□□□□ 0.65
CIRBP-228ENST00000590347 MAPK8IP3Q9UPT6 1336 aa19.11■□□□□ 0.65
CIRBP-228ENST00000590347 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.11■□□□□ 0.65
CIRBP-228ENST00000590347 TTC37Q6PGP7 1564 aa19.11■□□□□ 0.65
CIRBP-228ENST00000590347 ADCY10Q96PN6 1610 aa19.11■□□□□ 0.65
CIRBP-228ENST00000590347 POLR1AO95602 1720 aaPredicted RBP19.11■□□□□ 0.65
CIRBP-228ENST00000590347 EFCAB2Q5VUJ9 269 aa19.11■□□□□ 0.65
CIRBP-228ENST00000590347 SLFN5Q08AF3 891 aa19.1■□□□□ 0.65
CIRBP-228ENST00000590347 PLCD3Q8N3E9 789 aa19.1■□□□□ 0.65
CIRBP-228ENST00000590347 ANP32BQ92688 251 aaKnown RBP19.1■□□□□ 0.65
CIRBP-228ENST00000590347 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.09■□□□□ 0.65
CIRBP-228ENST00000590347 SAMD9LQ8IVG5 1584 aa19.09■□□□□ 0.65
CIRBP-228ENST00000590347 GTF2E1P29083 439 aaPredicted RBP19.09■□□□□ 0.65
CIRBP-228ENST00000590347 ADGRL2O95490 1459 aa19.09■□□□□ 0.65
CIRBP-228ENST00000590347 ZBTB22O15209 634 aa19.08■□□□□ 0.65
CIRBP-228ENST00000590347 CCDC141Q6ZP82 1450 aa19.08■□□□□ 0.64
CIRBP-228ENST00000590347 RLBP1P12271 317 aa19.08■□□□□ 0.64
CIRBP-228ENST00000590347 KDM5CP41229 1560 aa19.08■□□□□ 0.64
CIRBP-228ENST00000590347 HSP90AB1P08238 724 aaKnown RBP19.07■□□□□ 0.64
CIRBP-228ENST00000590347 RRP7AQ9Y3A4 280 aaKnown RBP19.07■□□□□ 0.64
CIRBP-228ENST00000590347 ABCC2Q92887 1545 aa19.07■□□□□ 0.64
CIRBP-228ENST00000590347 ZNF692Q9BU19 519 aaPredicted RBP19.07■□□□□ 0.64
CIRBP-228ENST00000590347 PLEKHH2Q8IVE3 1493 aa19.06■□□□□ 0.64
CIRBP-228ENST00000590347 CCDC173Q0VFZ6 552 aa19.06■□□□□ 0.64
CIRBP-228ENST00000590347 DDX49Q9Y6V7 483 aaKnown RBP19.06■□□□□ 0.64
CIRBP-228ENST00000590347 BLMP54132 1417 aaPredicted RBP19.06■□□□□ 0.64
CIRBP-228ENST00000590347 SSFA2P28290 1259 aa19.05■□□□□ 0.64
CIRBP-228ENST00000590347 SMAP1Q8IYB5 467 aaPredicted RBP19.05■□□□□ 0.64
CIRBP-228ENST00000590347 ARHGEF12Q9NZN5 1544 aa19.04■□□□□ 0.64
CIRBP-228ENST00000590347 CDC42BPBQ9Y5S2 1711 aa19.04■□□□□ 0.64
CIRBP-228ENST00000590347 CHAMP1Q96JM3 812 aa19.04■□□□□ 0.64
CIRBP-228ENST00000590347 NAP1L2Q9ULW6 460 aaPredicted RBP19.04■□□□□ 0.64
CIRBP-228ENST00000590347 ZMYM4Q5VZL5 1548 aa19.03■□□□□ 0.64
CIRBP-228ENST00000590347 TRAPPC8Q9Y2L5 1435 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms