RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 UGGT1Q9NYU2 1555 aa15.61■□□□□ 0.09
SDF2-208ENST00000589788 TET3O43151 1660 aa15.61■□□□□ 0.09
SDF2-208ENST00000589788 GCC2Q8IWJ2 1684 aa15.61■□□□□ 0.09
SDF2-208ENST00000589788 THEMISQ8N1K5 641 aaPredicted RBP15.6■□□□□ 0.09
SDF2-208ENST00000589788 NUP155O75694 1391 aa15.6■□□□□ 0.09
SDF2-208ENST00000589788 NAIPQ13075 1403 aa15.59■□□□□ 0.09
SDF2-208ENST00000589788 IQGAP3Q86VI3 1631 aa15.59■□□□□ 0.09
SDF2-208ENST00000589788 NCKAP5LQ9HCH0 1330 aa15.58■□□□□ 0.09
SDF2-208ENST00000589788 PTPRTO14522 1441 aa15.58■□□□□ 0.09
SDF2-208ENST00000589788 RPRD2Q5VT52 1461 aaKnown RBP15.58■□□□□ 0.08
SDF2-208ENST00000589788 HFM1A2PYH4 1435 aa15.58■□□□□ 0.08
SDF2-208ENST00000589788 SPOCK2Q92563 424 aa15.57■□□□□ 0.08
SDF2-208ENST00000589788 POLR1AO95602 1720 aaPredicted RBP15.55■□□□□ 0.08
SDF2-208ENST00000589788 ANKLE2Q86XL3 938 aa15.55■□□□□ 0.08
SDF2-208ENST00000589788 KLHL34Q8N239 644 aa15.55■□□□□ 0.08
SDF2-208ENST00000589788 PLCD3Q8N3E9 789 aa15.55■□□□□ 0.08
SDF2-208ENST00000589788 UBR1Q8IWV7 1749 aa15.55■□□□□ 0.08
SDF2-208ENST00000589788 E9PCH4 1651 aa15.54■□□□□ 0.08
SDF2-208ENST00000589788 SYNMO15061 1565 aa15.54■□□□□ 0.08
SDF2-208ENST00000589788 NOS1P29475 1434 aa15.54■□□□□ 0.08
SDF2-208ENST00000589788 PIK3C2BO00750 1634 aa15.54■□□□□ 0.08
SDF2-208ENST00000589788 IDI1Q13907 227 aa15.52■□□□□ 0.08
SDF2-208ENST00000589788 TRIM52Q96A61 297 aa15.52■□□□□ 0.08
SDF2-208ENST00000589788 SLC52A1Q9NWF4 448 aa15.52■□□□□ 0.08
SDF2-208ENST00000589788 MIER1Q8N108 512 aa15.51■□□□□ 0.07
SDF2-208ENST00000589788 KDM5AP29375 1690 aaKnown RBP15.5■□□□□ 0.07
SDF2-208ENST00000589788 NEURL4Q96JN8 1562 aa15.49■□□□□ 0.07
SDF2-208ENST00000589788 ADGRB3O60242 1522 aa15.48■□□□□ 0.07
SDF2-208ENST00000589788 EID1Q9Y6B2 187 aa15.47■□□□□ 0.07
SDF2-208ENST00000589788 NPHP4O75161 1426 aaPredicted RBP15.47■□□□□ 0.07
SDF2-208ENST00000589788 SLIT1O75093 1534 aa15.47■□□□□ 0.07
SDF2-208ENST00000589788 TXNDC2Q86VQ3 553 aa15.46■□□□□ 0.07
SDF2-208ENST00000589788 CERKQ8TCT0 537 aa15.46■□□□□ 0.07
SDF2-208ENST00000589788 SCAF11Q99590 1463 aaKnown RBP15.46■□□□□ 0.07
SDF2-208ENST00000589788 ARHGAP23Q9P227 1491 aa15.46■□□□□ 0.07
SDF2-208ENST00000589788 SPHKAPQ2M3C7 1700 aa15.46■□□□□ 0.06
SDF2-208ENST00000589788 IQGAP1P46940 1657 aa15.46■□□□□ 0.06
SDF2-208ENST00000589788 MED14O60244 1454 aa15.45■□□□□ 0.06
SDF2-208ENST00000589788 TMEM2Q9UHN6 1383 aa15.45■□□□□ 0.06
SDF2-208ENST00000589788 CHGAP10645 457 aaKnown RBP15.45■□□□□ 0.06
SDF2-208ENST00000589788 RBM42Q9BTD8 480 aaKnown RBP15.44■□□□□ 0.06
SDF2-208ENST00000589788 ZNF335Q9H4Z2 1342 aaPredicted RBP15.44■□□□□ 0.06
SDF2-208ENST00000589788 MYO5BQ9ULV0 1848 aa15.44■□□□□ 0.06
SDF2-208ENST00000589788 SETD5Q9C0A6 1442 aa15.43■□□□□ 0.06
SDF2-208ENST00000589788 ACIN1Q9UKV3 1341 aaKnown RBP15.43■□□□□ 0.06
SDF2-208ENST00000589788 LTKP29376 864 aa15.43■□□□□ 0.06
SDF2-208ENST00000589788 AKT1S1Q96B36 256 aa15.43■□□□□ 0.06
SDF2-208ENST00000589788 TMEM131LA2VDJ0 1609 aa15.42■□□□□ 0.06
SDF2-208ENST00000589788 LTBP4Q8N2S1 1624 aa15.42■□□□□ 0.06
SDF2-208ENST00000589788 HDGFP51858 240 aaKnown RBP15.41■□□□□ 0.06
SDF2-208ENST00000589788 ILDR1Q86SU0 546 aaPredicted RBP15.4■□□□□ 0.06
SDF2-208ENST00000589788 FBXO41Q8TF61 875 aa15.4■□□□□ 0.06
SDF2-208ENST00000589788 PPP1R15AO75807 674 aaPredicted RBP15.39■□□□□ 0.05
SDF2-208ENST00000589788 TRPM2O94759 1503 aa15.38■□□□□ 0.05
SDF2-208ENST00000589788 BCANQ96GW7 911 aa15.38■□□□□ 0.05
SDF2-208ENST00000589788 RIMS2Q9UQ26 1411 aa15.38■□□□□ 0.05
SDF2-208ENST00000589788 RAB3GAP2Q9H2M9 1393 aa15.37■□□□□ 0.05
SDF2-208ENST00000589788 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.37■□□□□ 0.05
SDF2-208ENST00000589788 CLTCL1P53675 1640 aa15.36■□□□□ 0.05
SDF2-208ENST00000589788 ZFYVE9O95405 1425 aa15.36■□□□□ 0.05
SDF2-208ENST00000589788 MPHOSPH9Q99550 1183 aa15.36■□□□□ 0.05
SDF2-208ENST00000589788 KIF1BO60333 1816 aa15.35■□□□□ 0.05
SDF2-208ENST00000589788 CPS1P31327 1500 aa15.35■□□□□ 0.05
SDF2-208ENST00000589788 ZNF326Q5BKZ1 582 aaKnown RBP15.35■□□□□ 0.05
SDF2-208ENST00000589788 SPDYE1Q8NFV5 336 aaPredicted RBP15.35■□□□□ 0.05
SDF2-208ENST00000589788 IQSEC2Q5JU85 1478 aa15.35■□□□□ 0.05
SDF2-208ENST00000589788 ECM2O94769 699 aaPredicted RBP15.34■□□□□ 0.05
SDF2-208ENST00000589788 PLEKHG1Q9ULL1 1385 aa15.32■□□□□ 0.04
SDF2-208ENST00000589788 NUTM2DQ5VT03 806 aaPredicted RBP15.32■□□□□ 0.04
SDF2-208ENST00000589788 SLC26A8Q96RN1 970 aa15.32■□□□□ 0.04
SDF2-208ENST00000589788 ZBTB47Q9UFB7 747 aaPredicted RBP15.32■□□□□ 0.04
SDF2-208ENST00000589788 PLEKHG5O94827 1062 aa15.3■□□□□ 0.04
SDF2-208ENST00000589788 PLCB2Q00722 1185 aa15.3■□□□□ 0.04
SDF2-208ENST00000589788 REM2Q8IYK8 340 aaPredicted RBP15.3■□□□□ 0.04
SDF2-208ENST00000589788 STRCP1A6NGW2 1772 aa15.3■□□□□ 0.04
SDF2-208ENST00000589788 CCDC144AA2RUR9 1427 aa15.29■□□□□ 0.04
SDF2-208ENST00000589788 HRCP23327 699 aa15.28■□□□□ 0.04
SDF2-208ENST00000589788 NEXMIFQ5QGS0 1516 aa15.25■□□□□ 0.03
SDF2-208ENST00000589788 DIP2AQ14689 1571 aa15.25■□□□□ 0.03
SDF2-208ENST00000589788 UBAP1LF5GYI3 381 aa15.25■□□□□ 0.03
SDF2-208ENST00000589788 RGL2O15211 777 aa15.25■□□□□ 0.03
SDF2-208ENST00000589788 KCNA6P17658 529 aa15.25■□□□□ 0.03
SDF2-208ENST00000589788 TBX22Q9Y458 520 aa15.25■□□□□ 0.03
SDF2-208ENST00000589788 LRRC7Q96NW7 1537 aa15.25■□□□□ 0.03
SDF2-208ENST00000589788 RPGRIP1LQ68CZ1 1315 aa15.24■□□□□ 0.03
SDF2-208ENST00000589788 ADAMTS13Q76LX8 1427 aa15.23■□□□□ 0.03
SDF2-208ENST00000589788 VGFO15240 615 aaPredicted RBP15.22■□□□□ 0.03
SDF2-208ENST00000589788 CLEC11AQ9Y240 323 aa15.22■□□□□ 0.03
SDF2-208ENST00000589788 NWD1Q149M9 1564 aa15.22■□□□□ 0.03
SDF2-208ENST00000589788 SETBP1Q9Y6X0 1596 aa15.22■□□□□ 0.03
SDF2-208ENST00000589788 CHD2O14647 1828 aaKnown RBP15.22■□□□□ 0.03
SDF2-208ENST00000589788 PPLO60437 1756 aa15.21■□□□□ 0.03
SDF2-208ENST00000589788 TOM1O60784 492 aa15.21■□□□□ 0.03
SDF2-208ENST00000589788 NKTRP30414 1462 aaKnown RBP15.21■□□□□ 0.03
SDF2-208ENST00000589788 RGL3Q3MIN7 710 aa15.21■□□□□ 0.03
SDF2-208ENST00000589788 PROSER2Q86WR7 435 aaPredicted RBP15.21■□□□□ 0.03
SDF2-208ENST00000589788 CREBZFQ9NS37 354 aa15.21■□□□□ 0.03
SDF2-208ENST00000589788 PIK3R4Q99570 1358 aa15.2■□□□□ 0.02
SDF2-208ENST00000589788 NRXN3Q9Y4C0 1643 aa15.2■□□□□ 0.02
SDF2-208ENST00000589788 CIZ1Q9ULV3 898 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms