RNA–Protein interactions for RNA: ENST00000589444.1

PTPN2-209, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

Gene PTPN2, Length 2,264 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-209ENST00000589444 FOSBP53539 338 aa7.4□□□□□ -1.22
PTPN2-209ENST00000589444 DPH6Q7L8W6 267 aa7.4□□□□□ -1.22
PTPN2-209ENST00000589444 RBM46Q8TBY0 533 aaKnown RBP7.4□□□□□ -1.22
PTPN2-209ENST00000589444 UNC13AQ9UPW8 1703 aa7.4□□□□□ -1.22
PTPN2-209ENST00000589444 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.4□□□□□ -1.23
PTPN2-209ENST00000589444 APBB1IPQ7Z5R6 666 aaPredicted RBP7.4□□□□□ -1.23
PTPN2-209ENST00000589444 GLMNQ92990 594 aa7.4□□□□□ -1.23
PTPN2-209ENST00000589444 CDCA7Q9BWT1 371 aaPredicted RBP7.4□□□□□ -1.23
PTPN2-209ENST00000589444 UBA5Q9GZZ9 404 aa7.4□□□□□ -1.23
PTPN2-209ENST00000589444 CREBZFQ9NS37 354 aa7.4□□□□□ -1.23
PTPN2-209ENST00000589444 GALR2O43603 387 aaPredicted RBP7.39□□□□□ -1.23
PTPN2-209ENST00000589444 MAGEC2Q9UBF1 373 aaPredicted RBP7.39□□□□□ -1.23
PTPN2-209ENST00000589444 IRF6O14896 467 aa7.39□□□□□ -1.23
PTPN2-209ENST00000589444 SRPK2P78362 688 aaKnown RBP7.39□□□□□ -1.23
PTPN2-209ENST00000589444 MAP2K5Q13163 448 aa7.39□□□□□ -1.23
PTPN2-209ENST00000589444 BCL2L13Q9BXK5 485 aa7.39□□□□□ -1.23
PTPN2-209ENST00000589444 NOP9Q86U38 636 aaKnown RBP7.38□□□□□ -1.23
PTPN2-209ENST00000589444 SMC5Q8IY18 1101 aa7.38□□□□□ -1.23
PTPN2-209ENST00000589444 OXER1Q8TDS5 423 aa7.38□□□□□ -1.23
PTPN2-209ENST00000589444 MS4A1P11836 297 aa7.37□□□□□ -1.23
PTPN2-209ENST00000589444 FOXD4L6Q3SYB3 417 aaPredicted RBP7.37□□□□□ -1.23
PTPN2-209ENST00000589444 FOXD4L3Q6VB84 417 aaPredicted RBP7.37□□□□□ -1.23
PTPN2-209ENST00000589444 NME8Q8N427 588 aa7.37□□□□□ -1.23
PTPN2-209ENST00000589444 SBNO2Q9Y2G9 1366 aa7.37□□□□□ -1.23
PTPN2-209ENST00000589444 MAP4K4O95819 1239 aaPredicted RBP7.36□□□□□ -1.23
PTPN2-209ENST00000589444 VAMP1P23763 118 aa7.36□□□□□ -1.23
PTPN2-209ENST00000589444 RFX1P22670 979 aa7.36□□□□□ -1.23
PTPN2-209ENST00000589444 TTLL12Q14166 644 aaPredicted RBP7.36□□□□□ -1.23
PTPN2-209ENST00000589444 WWC1Q8IX03 1113 aa7.36□□□□□ -1.23
PTPN2-209ENST00000589444 SLC39A7Q92504 469 aa7.36□□□□□ -1.23
PTPN2-209ENST00000589444 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.36□□□□□ -1.232e-6■■■□□ 16.9
PTPN2-209ENST00000589444 PEX14O75381 377 aa7.35□□□□□ -1.23
PTPN2-209ENST00000589444 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.35□□□□□ -1.23
PTPN2-209ENST00000589444 C7P10643 843 aa7.35□□□□□ -1.23
PTPN2-209ENST00000589444 GIPC2Q8TF65 315 aa7.35□□□□□ -1.23
PTPN2-209ENST00000589444 GPATCH3Q96I76 525 aa7.35□□□□□ -1.23
PTPN2-209ENST00000589444 KLHL42Q9P2K6 505 aa7.35□□□□□ -1.23
PTPN2-209ENST00000589444 TMA7Q9Y2S6 64 aaKnown RBP7.35□□□□□ -1.23
PTPN2-209ENST00000589444 POTEB2H3BUK9 544 aa7.34□□□□□ -1.23
PTPN2-209ENST00000589444 TBC1D2Q9BYX2 928 aa7.34□□□□□ -1.23
PTPN2-209ENST00000589444 SNRKQ9NRH2 765 aa7.34□□□□□ -1.23
PTPN2-209ENST00000589444 TMEM88BA6NKF7 163 aa7.34□□□□□ -1.24
PTPN2-209ENST00000589444 POM121CA8CG34 1229 aa7.34□□□□□ -1.24
PTPN2-209ENST00000589444 FAM43BQ6ZT52 329 aaPredicted RBP7.34□□□□□ -1.24
PTPN2-209ENST00000589444 LARGE2Q8N3Y3 721 aa7.34□□□□□ -1.24
PTPN2-209ENST00000589444 BANK1Q8NDB2 785 aa7.34□□□□□ -1.24
PTPN2-209ENST00000589444 IGBP1P78318 339 aa7.33□□□□□ -1.24
PTPN2-209ENST00000589444 RTL5Q5HYW3 569 aaPredicted RBP7.33□□□□□ -1.24
PTPN2-209ENST00000589444 GIGYF2Q6Y7W6 1299 aaKnown RBP7.33□□□□□ -1.24
PTPN2-209ENST00000589444 EIF3JO75822 258 aaKnown RBP7.32□□□□□ -1.24
PTPN2-209ENST00000589444 NEFMP07197 916 aa7.32□□□□□ -1.24
PTPN2-209ENST00000589444 MFSD10Q14728 455 aa7.32□□□□□ -1.24
PTPN2-209ENST00000589444 NOM1Q5C9Z4 860 aaKnown RBP7.32□□□□□ -1.24
PTPN2-209ENST00000589444 CFAP70Q5T0N1 1121 aa7.32□□□□□ -1.24
PTPN2-209ENST00000589444 FAM9BQ8IZU0 186 aa7.32□□□□□ -1.24
PTPN2-209ENST00000589444 LARP6Q9BRS8 491 aaKnown RBP7.32□□□□□ -1.24
PTPN2-209ENST00000589444 NCKAP5LQ9HCH0 1330 aa7.32□□□□□ -1.24
PTPN2-209ENST00000589444 CAMK2BQ13554 666 aa7.32□□□□□ -1.24
PTPN2-209ENST00000589444 EIF4G1Q04637 1599 aaKnown RBP7.32□□□□□ -1.24
PTPN2-209ENST00000589444 TLDC2A0PJX2 215 aa7.31□□□□□ -1.24
PTPN2-209ENST00000589444 PARNO95453 639 aaKnown RBP7.31□□□□□ -1.24
PTPN2-209ENST00000589444 LONRF3Q496Y0 759 aa7.31□□□□□ -1.24
PTPN2-209ENST00000589444 PROCA1Q8NCQ7 364 aaPredicted RBP7.31□□□□□ -1.24
PTPN2-209ENST00000589444 VTI1AQ96AJ9 217 aa7.31□□□□□ -1.24
PTPN2-209ENST00000589444 MFRPQ9BY79 579 aa7.31□□□□□ -1.24
PTPN2-209ENST00000589444 GDPD2Q9HCC8 539 aa7.31□□□□□ -1.24
PTPN2-209ENST00000589444 NACADO15069 1562 aa7.31□□□□□ -1.24
PTPN2-209ENST00000589444 CCDC194A0A1B0GVG4 234 aa7.31□□□□□ -1.24
PTPN2-209ENST00000589444 PPP1R37O75864 691 aa7.31□□□□□ -1.24
PTPN2-209ENST00000589444 OS9Q13438 667 aaPredicted RBP7.31□□□□□ -1.24
PTPN2-209ENST00000589444 FAM212AQ96EL1 285 aa7.31□□□□□ -1.24
PTPN2-209ENST00000589444 hCG_2014768A0A024R1R8 64 aa7.3□□□□□ -1.24
PTPN2-209ENST00000589444 CREB3O43889 395 aa7.3□□□□□ -1.24
PTPN2-209ENST00000589444 PPFIA4O75335 1185 aa7.3□□□□□ -1.24
PTPN2-209ENST00000589444 ASTLQ6HA08 431 aaPredicted RBP7.3□□□□□ -1.24
PTPN2-209ENST00000589444 EVI5LQ96CN4 794 aa7.3□□□□□ -1.24
PTPN2-209ENST00000589444 PHF12Q96QT6 1004 aa7.3□□□□□ -1.24
PTPN2-209ENST00000589444 ERCC6Q03468 1493 aa7.3□□□□□ -1.24
PTPN2-209ENST00000589444 PTPROQ16827 1216 aa7.3□□□□□ -1.24
PTPN2-209ENST00000589444 EGFLAMQ63HQ2 1017 aa7.3□□□□□ -1.24
PTPN2-209ENST00000589444 B4GALNT3Q6L9W6 998 aa7.3□□□□□ -1.24
PTPN2-209ENST00000589444 CCER1Q8TC90 406 aaPredicted RBP7.3□□□□□ -1.24
PTPN2-209ENST00000589444 METRNQ9UJH8 293 aa7.3□□□□□ -1.24
PTPN2-209ENST00000589444 PTMAP06454 111 aaKnown RBP7.29□□□□□ -1.24
PTPN2-209ENST00000589444 CLSPNQ9HAW4 1339 aa7.29□□□□□ -1.24
PTPN2-209ENST00000589444 PDE4AP27815 886 aa7.29□□□□□ -1.24
PTPN2-209ENST00000589444 PSME1Q06323 249 aa7.29□□□□□ -1.24
PTPN2-209ENST00000589444 NPAS4Q8IUM7 802 aa7.29□□□□□ -1.24
PTPN2-209ENST00000589444 KCNB2Q92953 911 aa7.29□□□□□ -1.24
PTPN2-209ENST00000589444 LNPKQ9C0E8 428 aa7.29□□□□□ -1.24
PTPN2-209ENST00000589444 SCUBE2Q9NQ36 999 aa7.29□□□□□ -1.24
PTPN2-209ENST00000589444 ATP1B4Q9UN42 357 aaPredicted RBP7.29□□□□□ -1.24
PTPN2-209ENST00000589444 CUEDC1Q9NWM3 386 aaPredicted RBP7.28□□□□□ -1.24
PTPN2-209ENST00000589444 ARID4AP29374 1257 aaPredicted RBP7.27□□□□□ -1.24
PTPN2-209ENST00000589444 HSP90AB2PQ58FF8 381 aa7.27□□□□□ -1.24
PTPN2-209ENST00000589444 ZNF467Q7Z7K2 595 aaPredicted RBP7.27□□□□□ -1.24
PTPN2-209ENST00000589444 PMM1Q92871 262 aa7.27□□□□□ -1.24
PTPN2-209ENST00000589444 FAN1Q9Y2M0 1017 aa7.27□□□□□ -1.24
PTPN2-209ENST00000589444 SPACA7Q96KW9 195 aa7.27□□□□□ -1.25
PTPN2-209ENST00000589444 ATMINO43313 823 aaPredicted RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms