RNA–Protein interactions for RNA: ENST00000589104.5

KDM4B-208, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,470 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-208ENST00000589104 ARID3CA6NKF2 412 aa18.15■□□□□ 0.5
KDM4B-208ENST00000589104 RRP1P56182 461 aaKnown RBP18.14■□□□□ 0.49
KDM4B-208ENST00000589104 CARD11Q9BXL7 1154 aa18.14■□□□□ 0.49
KDM4B-208ENST00000589104 IQSEC2Q5JU85 1478 aa18.14■□□□□ 0.49
KDM4B-208ENST00000589104 HNRNPMP52272 730 aaKnown RBP eCLIP18.14■□□□□ 0.493e-7■■■■□ 23.3
KDM4B-208ENST00000589104 NLRP13Q86W25 1043 aa18.14■□□□□ 0.49
KDM4B-208ENST00000589104 TRMT2AQ8IZ69 625 aaKnown RBP18.13■□□□□ 0.49
KDM4B-208ENST00000589104 MYT1LQ9UL68 1186 aa18.13■□□□□ 0.49
KDM4B-208ENST00000589104 SIGLEC1Q9BZZ2 1709 aa18.13■□□□□ 0.49
KDM4B-208ENST00000589104 ERVK-7P63135 1459 aa18.13■□□□□ 0.49
KDM4B-208ENST00000589104 HECW2Q9P2P5 1572 aa18.13■□□□□ 0.49
KDM4B-208ENST00000589104 FANCAO15360 1455 aa18.13■□□□□ 0.49
KDM4B-208ENST00000589104 KDM2BQ8NHM5 1336 aa18.12■□□□□ 0.49
KDM4B-208ENST00000589104 ANKRD26Q9UPS8 1709 aa18.12■□□□□ 0.49
KDM4B-208ENST00000589104 SBNO2Q9Y2G9 1366 aa18.12■□□□□ 0.49
KDM4B-208ENST00000589104 ADGRB2O60241 1585 aa18.11■□□□□ 0.49
KDM4B-208ENST00000589104 QRICH2Q9H0J4 1663 aa18.11■□□□□ 0.49
KDM4B-208ENST00000589104 ARHGEF28Q8N1W1 1705 aaKnown RBP18.1■□□□□ 0.49
KDM4B-208ENST00000589104 CLTCQ00610 1675 aaKnown RBP18.1■□□□□ 0.49
KDM4B-208ENST00000589104 NBPF1Q3BBV0 1214 aa18.08■□□□□ 0.49
KDM4B-208ENST00000589104 STAC3Q96MF2 364 aa18.08■□□□□ 0.49
KDM4B-208ENST00000589104 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.08■□□□□ 0.49
KDM4B-208ENST00000589104 RTN4Q9NQC3 1192 aaKnown RBP18.07■□□□□ 0.48
KDM4B-208ENST00000589104 CFAP74Q9C0B2 1584 aa18.07■□□□□ 0.48
KDM4B-208ENST00000589104 MS4A1P11836 297 aa18.05■□□□□ 0.48
KDM4B-208ENST00000589104 TSPY4P0CV99 314 aa18.05■□□□□ 0.48
KDM4B-208ENST00000589104 TSPY10P0CW01 314 aa18.05■□□□□ 0.48
KDM4B-208ENST00000589104 AMER1Q5JTC6 1135 aaPredicted RBP18.05■□□□□ 0.48
KDM4B-208ENST00000589104 DCAF11Q8TEB1 546 aa18.05■□□□□ 0.48
KDM4B-208ENST00000589104 CAMSAP1Q5T5Y3 1602 aa18.04■□□□□ 0.48
KDM4B-208ENST00000589104 PLEKHH1Q9ULM0 1364 aa18.04■□□□□ 0.48
KDM4B-208ENST00000589104 PAK3O75914 559 aaPredicted RBP18.04■□□□□ 0.48
KDM4B-208ENST00000589104 NBR1Q14596 966 aa18.03■□□□□ 0.48
KDM4B-208ENST00000589104 IPO9Q96P70 1041 aaKnown RBP18.02■□□□□ 0.47
KDM4B-208ENST00000589104 NOP58Q9Y2X3 529 aaKnown RBP18■□□□□ 0.47
KDM4B-208ENST00000589104 UGGT1Q9NYU2 1555 aa18■□□□□ 0.47
KDM4B-208ENST00000589104 NLRP1Q9C000 1473 aa18■□□□□ 0.47
KDM4B-208ENST00000589104 BACH2Q9BYV9 841 aa17.98■□□□□ 0.47
KDM4B-208ENST00000589104 ZNF777Q9ULD5 760 aaPredicted RBP17.98■□□□□ 0.47
KDM4B-208ENST00000589104 TCERG1O14776 1098 aaKnown RBP17.97■□□□□ 0.47
KDM4B-208ENST00000589104 RCAN3Q9UKA8 241 aa17.97■□□□□ 0.47
KDM4B-208ENST00000589104 SETD1AO15047 1707 aaKnown RBP17.96■□□□□ 0.47
KDM4B-208ENST00000589104 TMC1Q8TDI8 760 aa17.96■□□□□ 0.47
KDM4B-208ENST00000589104 ABCC3O15438 1527 aa17.95■□□□□ 0.46
KDM4B-208ENST00000589104 NEXMIFQ5QGS0 1516 aa17.95■□□□□ 0.46
KDM4B-208ENST00000589104 EXOC6Q8TAG9 804 aa17.94■□□□□ 0.46
KDM4B-208ENST00000589104 RICTORQ6R327 1708 aa17.94■□□□□ 0.46
KDM4B-208ENST00000589104 DUSP27Q5VZP5 1158 aa17.94■□□□□ 0.46
KDM4B-208ENST00000589104 CDC42BPGQ6DT37 1551 aa17.93■□□□□ 0.46
KDM4B-208ENST00000589104 GLI2P10070 1586 aa17.93■□□□□ 0.46
KDM4B-208ENST00000589104 EIF3AQ14152 1382 aaKnown RBP17.93■□□□□ 0.46
KDM4B-208ENST00000589104 ZMYM3Q14202 1370 aa17.93■□□□□ 0.46
KDM4B-208ENST00000589104 PHF23Q9BUL5 403 aaPredicted RBP17.92■□□□□ 0.46
KDM4B-208ENST00000589104 ADGRL1O94910 1474 aa17.92■□□□□ 0.46
KDM4B-208ENST00000589104 MLH3Q9UHC1 1453 aa17.92■□□□□ 0.46
KDM4B-208ENST00000589104 KANK1Q14678 1352 aa17.91■□□□□ 0.46
KDM4B-208ENST00000589104 NCBP3Q53F19 620 aaKnown RBP17.9■□□□□ 0.46
KDM4B-208ENST00000589104 CDCA7LQ96GN5 454 aa17.9■□□□□ 0.46
KDM4B-208ENST00000589104 PANK3Q9H999 370 aa17.9■□□□□ 0.46
KDM4B-208ENST00000589104 TULP4Q9NRJ4 1543 aa17.89■□□□□ 0.45
KDM4B-208ENST00000589104 PPP2R1AP30153 589 aa17.89■□□□□ 0.45
KDM4B-208ENST00000589104 POLR3AO14802 1390 aaPredicted RBP17.89■□□□□ 0.45
KDM4B-208ENST00000589104 COL3A1P02461 1466 aaPredicted RBP17.89■□□□□ 0.45
KDM4B-208ENST00000589104 NKTRP30414 1462 aaKnown RBP17.87■□□□□ 0.45
KDM4B-208ENST00000589104 NOS1P29475 1434 aa17.87■□□□□ 0.45
KDM4B-208ENST00000589104 TMF1P82094 1093 aa17.86■□□□□ 0.45
KDM4B-208ENST00000589104 IL27Q8NEV9 243 aa17.85■□□□□ 0.45
KDM4B-208ENST00000589104 EIF5BO60841 1220 aaKnown RBP17.84■□□□□ 0.45
KDM4B-208ENST00000589104 DIP2CQ9Y2E4 1556 aa17.84■□□□□ 0.45
KDM4B-208ENST00000589104 MYO5BQ9ULV0 1848 aa17.84■□□□□ 0.45
KDM4B-208ENST00000589104 PDE4AP27815 886 aa17.84■□□□□ 0.45
KDM4B-208ENST00000589104 TMEM131LA2VDJ0 1609 aa17.83■□□□□ 0.44
KDM4B-208ENST00000589104 SLFN5Q08AF3 891 aa17.83■□□□□ 0.44
KDM4B-208ENST00000589104 MED14O60244 1454 aa17.83■□□□□ 0.44
KDM4B-208ENST00000589104 KIF20BQ96Q89 1820 aa17.82■□□□□ 0.44
KDM4B-208ENST00000589104 NINLQ9Y2I6 1382 aa17.82■□□□□ 0.44
KDM4B-208ENST00000589104 ZFYVE9O95405 1425 aa17.82■□□□□ 0.44
KDM4B-208ENST00000589104 POGZQ7Z3K3 1410 aa17.82■□□□□ 0.44
KDM4B-208ENST00000589104 ADAMTS8Q9UP79 889 aa17.81■□□□□ 0.44
KDM4B-208ENST00000589104 KDM2AQ9Y2K7 1162 aa17.81■□□□□ 0.44
KDM4B-208ENST00000589104 ARHGAP31Q2M1Z3 1444 aa17.81■□□□□ 0.44
KDM4B-208ENST00000589104 PREX1Q8TCU6 1659 aa17.8■□□□□ 0.44
KDM4B-208ENST00000589104 ZNF326Q5BKZ1 582 aaKnown RBP17.8■□□□□ 0.44
KDM4B-208ENST00000589104 C8orf34Q49A92 452 aa17.8■□□□□ 0.44
KDM4B-208ENST00000589104 REREQ9P2R6 1566 aa17.79■□□□□ 0.44
KDM4B-208ENST00000589104 EFCAB2Q5VUJ9 269 aa17.79■□□□□ 0.44
KDM4B-208ENST00000589104 NPATQ14207 1427 aa17.79■□□□□ 0.44
KDM4B-208ENST00000589104 RIMBP3CA6NJZ7 1639 aa17.79■□□□□ 0.44
KDM4B-208ENST00000589104 RIMBP3BA6NNM3 1639 aa17.79■□□□□ 0.44
KDM4B-208ENST00000589104 RIMBP3Q9UFD9 1639 aa17.79■□□□□ 0.44
KDM4B-208ENST00000589104 NGEFQ8N5V2 710 aa17.78■□□□□ 0.44
KDM4B-208ENST00000589104 USP35Q9P2H5 1018 aa17.78■□□□□ 0.44
KDM4B-208ENST00000589104 C20orf194Q5TEA3 1177 aa17.78■□□□□ 0.44
KDM4B-208ENST00000589104 UBE2Q2Q8WVN8 375 aa17.77■□□□□ 0.44
KDM4B-208ENST00000589104 PUS7Q96PZ0 661 aaKnown RBP17.77■□□□□ 0.44
KDM4B-208ENST00000589104 USP19O94966 1318 aa17.76■□□□□ 0.43
KDM4B-208ENST00000589104 CRBNQ96SW2 442 aa17.76■□□□□ 0.43
KDM4B-208ENST00000589104 CARD14Q9BXL6 1004 aa17.76■□□□□ 0.43
KDM4B-208ENST00000589104 CD163L1Q9NR16 1453 aa17.76■□□□□ 0.43
KDM4B-208ENST00000589104 SPINK5Q9NQ38 1064 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms