RNA–Protein interactions for RNA: ENST00000588164.2

LAMA3-209, Transcript of laminin subunit alpha 3, humanhuman

TSL 5

Gene LAMA3, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-209ENST00000588164 CCNB3Q8WWL7 1395 aa11.09□□□□□ -0.63
LAMA3-209ENST00000588164 CFAP65Q6ZU64 1925 aaKnown RBP11.08□□□□□ -0.64
LAMA3-209ENST00000588164 ATXN8OSP0DMR3 200 aa11.08□□□□□ -0.64
LAMA3-209ENST00000588164 CCDC141Q6ZP82 1450 aa11.07□□□□□ -0.64
LAMA3-209ENST00000588164 MSH6P52701 1360 aa11.07□□□□□ -0.64
LAMA3-209ENST00000588164 CEP152O94986 1710 aa11.06□□□□□ -0.64
LAMA3-209ENST00000588164 TET3O43151 1660 aa11.06□□□□□ -0.64
LAMA3-209ENST00000588164 KCNA6P17658 529 aa11.06□□□□□ -0.64
LAMA3-209ENST00000588164 MEX3CQ5U5Q3 659 aaKnown RBP11.06□□□□□ -0.64
LAMA3-209ENST00000588164 LTKP29376 864 aa11.05□□□□□ -0.64
LAMA3-209ENST00000588164 TXNDC2Q86VQ3 553 aa11.05□□□□□ -0.64
LAMA3-209ENST00000588164 EID1Q9Y6B2 187 aa11.05□□□□□ -0.64
LAMA3-209ENST00000588164 MROH1Q8NDA8 1641 aa11.05□□□□□ -0.64
LAMA3-209ENST00000588164 RGS12O14924 1447 aa11.04□□□□□ -0.64
LAMA3-209ENST00000588164 ERICH6Q7L0X2 663 aa11.04□□□□□ -0.64
LAMA3-209ENST00000588164 SLAIN2Q9P270 581 aa11.04□□□□□ -0.64
LAMA3-209ENST00000588164 PIK3C2BO00750 1634 aa11.04□□□□□ -0.64
LAMA3-209ENST00000588164 EP400Q96L91 3159 aa11.04□□□□□ -0.64
LAMA3-209ENST00000588164 DIP2AQ14689 1571 aa11.03□□□□□ -0.64
LAMA3-209ENST00000588164 LRP5O75197 1615 aa11.03□□□□□ -0.64
LAMA3-209ENST00000588164 CHD2O14647 1828 aaKnown RBP11.03□□□□□ -0.64
LAMA3-209ENST00000588164 UBTFP17480 764 aaKnown RBP11.03□□□□□ -0.64
LAMA3-209ENST00000588164 ARHGEF5Q12774 1597 aa11.03□□□□□ -0.64
LAMA3-209ENST00000588164 SETBP1Q9Y6X0 1596 aa11.03□□□□□ -0.64
LAMA3-209ENST00000588164 TMEM2Q9UHN6 1383 aa11.03□□□□□ -0.64
LAMA3-209ENST00000588164 RSPH4AQ5TD94 716 aa11.02□□□□□ -0.65
LAMA3-209ENST00000588164 ZRANB1Q9UGI0 708 aa11.02□□□□□ -0.65
LAMA3-209ENST00000588164 ARHGAP31Q2M1Z3 1444 aa11.01□□□□□ -0.65
LAMA3-209ENST00000588164 NCOA3Q9Y6Q9 1424 aa11.01□□□□□ -0.65
LAMA3-209ENST00000588164 PROSER2Q86WR7 435 aaPredicted RBP11.01□□□□□ -0.65
LAMA3-209ENST00000588164 HOMEZQ8IX15 550 aa11.01□□□□□ -0.65
LAMA3-209ENST00000588164 ATAD2Q6PL18 1390 aa11.01□□□□□ -0.65
LAMA3-209ENST00000588164 EFCAB6Q5THR3 1501 aa11□□□□□ -0.65
LAMA3-209ENST00000588164 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11□□□□□ -0.65
LAMA3-209ENST00000588164 EHBP1L1Q8N3D4 1523 aa10.99□□□□□ -0.65
LAMA3-209ENST00000588164 MAST1Q9Y2H9 1570 aa10.99□□□□□ -0.65
LAMA3-209ENST00000588164 ZNF644Q9H582 1327 aaPredicted RBP10.99□□□□□ -0.65
LAMA3-209ENST00000588164 RBM6P78332 1123 aaKnown RBP10.98□□□□□ -0.65
LAMA3-209ENST00000588164 GTF3C3Q9Y5Q9 886 aa10.98□□□□□ -0.65
LAMA3-209ENST00000588164 MTUS2Q5JR59 1369 aa10.98□□□□□ -0.65
LAMA3-209ENST00000588164 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.98□□□□□ -0.65
LAMA3-209ENST00000588164 AFF2P51816 1311 aa10.97□□□□□ -0.65
LAMA3-209ENST00000588164 CEP162Q5TB80 1403 aa10.97□□□□□ -0.65
LAMA3-209ENST00000588164 NHSL1Q5SYE7 1610 aa10.96□□□□□ -0.65
LAMA3-209ENST00000588164 KDM2AQ9Y2K7 1162 aa10.96□□□□□ -0.65
LAMA3-209ENST00000588164 SETD5Q9C0A6 1442 aa10.94□□□□□ -0.66
LAMA3-209ENST00000588164 CCDC125Q86Z20 511 aa10.94□□□□□ -0.66
LAMA3-209ENST00000588164 NGLY1Q96IV0 654 aa10.94□□□□□ -0.66
LAMA3-209ENST00000588164 ADGRB3O60242 1522 aa10.94□□□□□ -0.66
LAMA3-209ENST00000588164 NUTM2BA6NNL0 878 aaPredicted RBP10.93□□□□□ -0.66
LAMA3-209ENST00000588164 NUTM2EB1AL46 878 aaPredicted RBP10.93□□□□□ -0.66
LAMA3-209ENST00000588164 NUTM2DQ5VT03 806 aaPredicted RBP10.93□□□□□ -0.66
LAMA3-209ENST00000588164 NUTM2AQ8IVF1 878 aaPredicted RBP10.93□□□□□ -0.66
LAMA3-209ENST00000588164 RBM33Q96EV2 1170 aaKnown RBP10.93□□□□□ -0.66
LAMA3-209ENST00000588164 SLC4A2P04920 1241 aa10.92□□□□□ -0.66
LAMA3-209ENST00000588164 CADPS2Q86UW7 1296 aa10.92□□□□□ -0.66
LAMA3-209ENST00000588164 SLC26A8Q96RN1 970 aa10.92□□□□□ -0.66
LAMA3-209ENST00000588164 DUOX2Q9NRD8 1548 aa10.91□□□□□ -0.66
LAMA3-209ENST00000588164 TSPY4P0CV99 314 aa10.91□□□□□ -0.66
LAMA3-209ENST00000588164 TSPY10P0CW01 314 aa10.91□□□□□ -0.66
LAMA3-209ENST00000588164 QTRT2Q9H974 415 aaKnown RBP10.91□□□□□ -0.66
LAMA3-209ENST00000588164 U3KPZ7 1027 aaPredicted RBP10.91□□□□□ -0.66
LAMA3-209ENST00000588164 DCCP43146 1447 aa10.91□□□□□ -0.66
LAMA3-209ENST00000588164 ASXL1Q8IXJ9 1541 aa10.9□□□□□ -0.66
LAMA3-209ENST00000588164 STAG3Q9UJ98 1225 aa10.89□□□□□ -0.67
LAMA3-209ENST00000588164 PLEKHG1Q9ULL1 1385 aa10.89□□□□□ -0.67
LAMA3-209ENST00000588164 MYO5BQ9ULV0 1848 aa10.88□□□□□ -0.67
LAMA3-209ENST00000588164 C19orf44Q9H6X5 657 aa10.88□□□□□ -0.67
LAMA3-209ENST00000588164 LMTK2Q8IWU2 1503 aa10.88□□□□□ -0.67
LAMA3-209ENST00000588164 ATF3P18847 181 aa10.87□□□□□ -0.67
LAMA3-209ENST00000588164 BRINP3Q76B58 766 aa10.87□□□□□ -0.67
LAMA3-209ENST00000588164 C8orf37Q96NL8 207 aa10.87□□□□□ -0.67
LAMA3-209ENST00000588164 LAMC1P11047 1609 aa10.87□□□□□ -0.67
LAMA3-209ENST00000588164 SPHKAPQ2M3C7 1700 aa10.87□□□□□ -0.67
LAMA3-209ENST00000588164 ZFYVE9O95405 1425 aa10.86□□□□□ -0.67
LAMA3-209ENST00000588164 ERBINQ96RT1 1412 aa10.86□□□□□ -0.67
LAMA3-209ENST00000588164 PIK3R4Q99570 1358 aa10.86□□□□□ -0.67
LAMA3-209ENST00000588164 IDI1Q13907 227 aa10.85□□□□□ -0.67
LAMA3-209ENST00000588164 LRRC59Q96AG4 307 aaKnown RBP10.85□□□□□ -0.67
LAMA3-209ENST00000588164 PNPLA6Q8IY17 1366 aa10.85□□□□□ -0.67
LAMA3-209ENST00000588164 NOS1P29475 1434 aa10.84□□□□□ -0.67
LAMA3-209ENST00000588164 TRPC5Q9UL62 973 aaPredicted RBP10.84□□□□□ -0.67
LAMA3-209ENST00000588164 UNC13BO14795 1591 aa10.84□□□□□ -0.67
LAMA3-209ENST00000588164 GCC2Q8IWJ2 1684 aa10.84□□□□□ -0.67
LAMA3-209ENST00000588164 MARF1Q9Y4F3 1742 aaKnown RBP10.84□□□□□ -0.67
LAMA3-209ENST00000588164 ATRNO75882 1429 aa10.84□□□□□ -0.67
LAMA3-209ENST00000588164 BLMP54132 1417 aaPredicted RBP10.84□□□□□ -0.67
LAMA3-209ENST00000588164 CROCC2H7BZ55 1655 aa10.83□□□□□ -0.68
LAMA3-209ENST00000588164 C14orf37Q86TY3 774 aa10.83□□□□□ -0.68
LAMA3-209ENST00000588164 TBX22Q9Y458 520 aa10.83□□□□□ -0.68
LAMA3-209ENST00000588164 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.83□□□□□ -0.68
LAMA3-209ENST00000588164 COL22A1Q8NFW1 1626 aaPredicted RBP10.83□□□□□ -0.68
LAMA3-209ENST00000588164 PTCH1Q13635 1447 aa10.83□□□□□ -0.68
LAMA3-209ENST00000588164 MST1RQ04912 1400 aa10.82□□□□□ -0.68
LAMA3-209ENST00000588164 TMEM131LA2VDJ0 1609 aa10.81□□□□□ -0.68
LAMA3-209ENST00000588164 TRPM2O94759 1503 aa10.81□□□□□ -0.68
LAMA3-209ENST00000588164 MYCNP04198 464 aaPredicted RBP10.81□□□□□ -0.68
LAMA3-209ENST00000588164 SLC52A1Q9NWF4 448 aa10.81□□□□□ -0.68
LAMA3-209ENST00000588164 XRN1Q8IZH2 1706 aaKnown RBP10.81□□□□□ -0.68
LAMA3-209ENST00000588164 RPRD2Q5VT52 1461 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms