RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 KIAA1107Q9UPP5 1409 aa8.4□□□□□ -1.06
SDF2-206ENST00000587788 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.4□□□□□ -1.06
SDF2-206ENST00000587788 ZNF316A6NFI3 1004 aaPredicted RBP8.4□□□□□ -1.06
SDF2-206ENST00000587788 SOX12O15370 315 aa8.4□□□□□ -1.06
SDF2-206ENST00000587788 CABP2Q9NPB3 220 aa8.4□□□□□ -1.06
SDF2-206ENST00000587788 CADPS2Q86UW7 1296 aa8.39□□□□□ -1.07
SDF2-206ENST00000587788 MS4A3Q96HJ5 214 aa8.39□□□□□ -1.07
SDF2-206ENST00000587788 NLRP6P59044 892 aa8.38□□□□□ -1.07
SDF2-206ENST00000587788 CCDC141Q6ZP82 1450 aa8.38□□□□□ -1.07
SDF2-206ENST00000587788 C3P01024 1663 aa8.37□□□□□ -1.07
SDF2-206ENST00000587788 DNMT1P26358 1616 aaKnown RBP8.37□□□□□ -1.07
SDF2-206ENST00000587788 ARID4BQ4LE39 1312 aaPredicted RBP8.37□□□□□ -1.07
SDF2-206ENST00000587788 MAST1Q9Y2H9 1570 aa8.37□□□□□ -1.07
SDF2-206ENST00000587788 DIEXFQ68CQ4 756 aaKnown RBP8.37□□□□□ -1.07
SDF2-206ENST00000587788 PHF8Q9UPP1 1060 aa8.37□□□□□ -1.07
SDF2-206ENST00000587788 TRPC6Q9Y210 931 aa8.37□□□□□ -1.07
SDF2-206ENST00000587788 PTPRMP28827 1452 aa8.37□□□□□ -1.07
SDF2-206ENST00000587788 ACIN1Q9UKV3 1341 aaKnown RBP8.36□□□□□ -1.07
SDF2-206ENST00000587788 AGLP35573 1532 aa8.36□□□□□ -1.07
SDF2-206ENST00000587788 PPP1R37O75864 691 aa8.36□□□□□ -1.07
SDF2-206ENST00000587788 RSPH4AQ5TD94 716 aa8.36□□□□□ -1.07
SDF2-206ENST00000587788 CLTCQ00610 1675 aaKnown RBP8.36□□□□□ -1.07
SDF2-206ENST00000587788 FGD6Q6ZV73 1430 aa8.36□□□□□ -1.07
SDF2-206ENST00000587788 MIA2Q96PC5 1412 aa8.36□□□□□ -1.07
SDF2-206ENST00000587788 DHX57Q6P158 1386 aaKnown RBP8.35□□□□□ -1.07
SDF2-206ENST00000587788 SPAG9O60271 1321 aaKnown RBP8.35□□□□□ -1.07
SDF2-206ENST00000587788 TCOF1Q13428 1488 aaKnown RBP8.35□□□□□ -1.07
SDF2-206ENST00000587788 MLECQ14165 292 aa8.35□□□□□ -1.07
SDF2-206ENST00000587788 FAM50AQ14320 339 aaKnown RBP8.35□□□□□ -1.07
SDF2-206ENST00000587788 MYT1LQ9UL68 1186 aa8.35□□□□□ -1.07
SDF2-206ENST00000587788 MROH2AA6NES4 1674 aa8.34□□□□□ -1.07
SDF2-206ENST00000587788 A2MP01023 1474 aa8.34□□□□□ -1.07
SDF2-206ENST00000587788 MS4A4AQ96JQ5 239 aa8.34□□□□□ -1.07
SDF2-206ENST00000587788 TMEM106CQ9BVX2 250 aa8.34□□□□□ -1.07
SDF2-206ENST00000587788 RTEL1-TNFRSF6BF6WH68 1400 aa8.33□□□□□ -1.08
SDF2-206ENST00000587788 TIE1P35590 1138 aa8.33□□□□□ -1.08
SDF2-206ENST00000587788 SETD5Q9C0A6 1442 aa8.33□□□□□ -1.08
SDF2-206ENST00000587788 CEP152O94986 1710 aa8.32□□□□□ -1.08
SDF2-206ENST00000587788 NBR1Q14596 966 aa8.32□□□□□ -1.08
SDF2-206ENST00000587788 ILDR1Q86SU0 546 aaPredicted RBP8.32□□□□□ -1.08
SDF2-206ENST00000587788 PREX1Q8TCU6 1659 aa8.32□□□□□ -1.08
SDF2-206ENST00000587788 MROH1Q8NDA8 1641 aa8.32□□□□□ -1.08
SDF2-206ENST00000587788 RNF17Q9BXT8 1623 aaKnown RBP8.32□□□□□ -1.08
SDF2-206ENST00000587788 EIF2AK4Q9P2K8 1649 aaKnown RBP8.32□□□□□ -1.08
SDF2-206ENST00000587788 ABCC5O15440 1437 aa8.31□□□□□ -1.08
SDF2-206ENST00000587788 DAPK1P53355 1430 aa8.31□□□□□ -1.08
SDF2-206ENST00000587788 TIMELESSQ9UNS1 1208 aa8.31□□□□□ -1.08
SDF2-206ENST00000587788 SHANK2Q9UPX8 1470 aa8.31□□□□□ -1.08
SDF2-206ENST00000587788 PRKCSHP14314 528 aaPredicted RBP8.3□□□□□ -1.08
SDF2-206ENST00000587788 CFAP65Q6ZU64 1925 aaKnown RBP8.29□□□□□ -1.08
SDF2-206ENST00000587788 TTLL13PA6NNM8 815 aa8.29□□□□□ -1.08
SDF2-206ENST00000587788 ITGAEP38570 1179 aa8.29□□□□□ -1.08
SDF2-206ENST00000587788 BMP2KQ9NSY1 1161 aaPredicted RBP8.29□□□□□ -1.08
SDF2-206ENST00000587788 RAB3GAP2Q9H2M9 1393 aa8.29□□□□□ -1.08
SDF2-206ENST00000587788 DEPDC5O75140 1603 aa8.29□□□□□ -1.08
SDF2-206ENST00000587788 ZC3H13Q5T200 1668 aaKnown RBP8.28□□□□□ -1.08
SDF2-206ENST00000587788 LMTK3Q96Q04 1460 aa8.28□□□□□ -1.08
SDF2-206ENST00000587788 DHX29Q7Z478 1369 aaKnown RBP8.28□□□□□ -1.08
SDF2-206ENST00000587788 CENPBP07199 599 aaPredicted RBP8.28□□□□□ -1.08
SDF2-206ENST00000587788 TSPY4P0CV99 314 aa8.28□□□□□ -1.08
SDF2-206ENST00000587788 TSPY10P0CW01 314 aa8.28□□□□□ -1.08
SDF2-206ENST00000587788 CLCN6P51797 869 aa8.28□□□□□ -1.08
SDF2-206ENST00000587788 GALR2O43603 387 aaPredicted RBP8.27□□□□□ -1.09
SDF2-206ENST00000587788 CEBPAP49715 358 aaPredicted RBP8.27□□□□□ -1.09
SDF2-206ENST00000587788 KCNV2Q8TDN2 545 aa8.27□□□□□ -1.09
SDF2-206ENST00000587788 CAMSAP1Q5T5Y3 1602 aa8.27□□□□□ -1.09
SDF2-206ENST00000587788 DUOX2Q9NRD8 1548 aa8.27□□□□□ -1.09
SDF2-206ENST00000587788 PTPRKQ15262 1439 aa8.27□□□□□ -1.09
SDF2-206ENST00000587788 SETD1BQ9UPS6 1966 aaKnown RBP8.26□□□□□ -1.09
SDF2-206ENST00000587788 MYO3AQ8NEV4 1616 aa8.26□□□□□ -1.09
SDF2-206ENST00000587788 KDM5DQ9BY66 1539 aa8.26□□□□□ -1.09
SDF2-206ENST00000587788 EVX2Q03828 476 aa8.26□□□□□ -1.09
SDF2-206ENST00000587788 TPRNQ4KMQ1 711 aa8.26□□□□□ -1.09
SDF2-206ENST00000587788 ADGRL2O95490 1459 aa8.26□□□□□ -1.09
SDF2-206ENST00000587788 PRDM15P57071 1507 aaPredicted RBP8.25□□□□□ -1.09
SDF2-206ENST00000587788 ZNF142P52746 1687 aaPredicted RBP8.25□□□□□ -1.09
SDF2-206ENST00000587788 GOLGA2Q08379 1002 aa8.25□□□□□ -1.09
SDF2-206ENST00000587788 STRCQ7RTU9 1775 aa8.25□□□□□ -1.09
SDF2-206ENST00000587788 KIF15Q9NS87 1388 aa8.24□□□□□ -1.09
SDF2-206ENST00000587788 CNTLNQ9NXG0 1405 aa8.24□□□□□ -1.09
SDF2-206ENST00000587788 KIF3BO15066 747 aa8.24□□□□□ -1.09
SDF2-206ENST00000587788 MKRN3Q13064 507 aaKnown RBP8.24□□□□□ -1.09
SDF2-206ENST00000587788 GGT6Q6P531 493 aa8.24□□□□□ -1.09
SDF2-206ENST00000587788 CHIC2Q9UKJ5 165 aa8.24□□□□□ -1.09
SDF2-206ENST00000587788 NCKAP5LQ9HCH0 1330 aa8.24□□□□□ -1.09
SDF2-206ENST00000587788 ABCC3O15438 1527 aa8.24□□□□□ -1.09
SDF2-206ENST00000587788 FAM135AQ9P2D6 1515 aa8.24□□□□□ -1.09
SDF2-206ENST00000587788 HFM1A2PYH4 1435 aa8.23□□□□□ -1.09
SDF2-206ENST00000587788 NCOA1Q15788 1441 aa8.23□□□□□ -1.09
SDF2-206ENST00000587788 ERBINQ96RT1 1412 aa8.23□□□□□ -1.09
SDF2-206ENST00000587788 HAX1O00165 279 aa8.23□□□□□ -1.09
SDF2-206ENST00000587788 MFSD10Q14728 455 aa8.23□□□□□ -1.09
SDF2-206ENST00000587788 CRISPLD2Q9H0B8 497 aa8.23□□□□□ -1.09
SDF2-206ENST00000587788 WDR70Q9NW82 654 aa8.23□□□□□ -1.09
SDF2-206ENST00000587788 GCC2Q8IWJ2 1684 aa8.23□□□□□ -1.09
SDF2-206ENST00000587788 UNC13BO14795 1591 aa8.22□□□□□ -1.09
SDF2-206ENST00000587788 RRP7BPQ9NSQ0 103 aa8.22□□□□□ -1.09
SDF2-206ENST00000587788 TRIM35Q9UPQ4 493 aa8.22□□□□□ -1.09
SDF2-206ENST00000587788 VWDEQ8N2E2 1590 aa8.22□□□□□ -1.09
SDF2-206ENST00000587788 ZMYM3Q14202 1370 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms