RNA–Protein interactions for RNA: ENST00000584010.5

DDX42-217, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 3,929 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-217ENST00000584010 NAIPQ13075 1403 aa9.27□□□□□ -0.92
DDX42-217ENST00000584010 EIF4G2P78344 907 aaKnown RBP eCLIP9.27□□□□□ -0.92
DDX42-217ENST00000584010 CDC42BPAQ5VT25 1732 aa9.27□□□□□ -0.93
DDX42-217ENST00000584010 EHBP1L1Q8N3D4 1523 aa9.27□□□□□ -0.93
DDX42-217ENST00000584010 TCOF1Q13428 1488 aaKnown RBP9.27□□□□□ -0.93
DDX42-217ENST00000584010 PTPN23Q9H3S7 1636 aa9.27□□□□□ -0.93
DDX42-217ENST00000584010 HSPA5P11021 654 aaKnown RBP9.26□□□□□ -0.93
DDX42-217ENST00000584010 ZNF326Q5BKZ1 582 aaKnown RBP9.26□□□□□ -0.93
DDX42-217ENST00000584010 IL27Q8NEV9 243 aa9.26□□□□□ -0.93
DDX42-217ENST00000584010 MEX3CQ5U5Q3 659 aaKnown RBP9.26□□□□□ -0.93
DDX42-217ENST00000584010 VIRMAQ69YN4 1812 aaKnown RBP9.25□□□□□ -0.93
DDX42-217ENST00000584010 IRX6P78412 446 aaPredicted RBP9.25□□□□□ -0.93
DDX42-217ENST00000584010 LTKP29376 864 aa9.25□□□□□ -0.93
DDX42-217ENST00000584010 CCDC141Q6ZP82 1450 aa9.25□□□□□ -0.93
DDX42-217ENST00000584010 UGGT1Q9NYU2 1555 aa9.25□□□□□ -0.93
DDX42-217ENST00000584010 RTEL1-TNFRSF6BF6WH68 1400 aa9.25□□□□□ -0.93
DDX42-217ENST00000584010 A0A0U1RQG5 324 aaPredicted RBP9.25□□□□□ -0.93
DDX42-217ENST00000584010 MPHOSPH9Q99550 1183 aa9.25□□□□□ -0.93
DDX42-217ENST00000584010 TAF7LQ5H9L4 462 aa9.24□□□□□ -0.93
DDX42-217ENST00000584010 SLC4A1APQ9BWU0 796 aaKnown RBP9.24□□□□□ -0.93
DDX42-217ENST00000584010 LRRIQ1Q96JM4 1722 aa9.24□□□□□ -0.93
DDX42-217ENST00000584010 FAM9BQ8IZU0 186 aa9.24□□□□□ -0.93
DDX42-217ENST00000584010 MYO3AQ8NEV4 1616 aa9.24□□□□□ -0.93
DDX42-217ENST00000584010 CPS1P31327 1500 aa9.23□□□□□ -0.93
DDX42-217ENST00000584010 MBD5Q9P267 1494 aa9.23□□□□□ -0.93
DDX42-217ENST00000584010 KANK1Q14678 1352 aa9.22□□□□□ -0.93
DDX42-217ENST00000584010 KLHL34Q8N239 644 aa9.22□□□□□ -0.93
DDX42-217ENST00000584010 L3MBTL2Q969R5 705 aa9.22□□□□□ -0.93
DDX42-217ENST00000584010 PZPP20742 1482 aa9.22□□□□□ -0.93
DDX42-217ENST00000584010 DNMT1P26358 1616 aaKnown RBP9.22□□□□□ -0.93
DDX42-217ENST00000584010 CFAP65Q6ZU64 1925 aaKnown RBP9.22□□□□□ -0.93
DDX42-217ENST00000584010 NLRP1Q9C000 1473 aa9.22□□□□□ -0.93
DDX42-217ENST00000584010 CAMSAP2Q08AD1 1489 aa9.21□□□□□ -0.93
DDX42-217ENST00000584010 NUTM2DQ5VT03 806 aaPredicted RBP9.21□□□□□ -0.93
DDX42-217ENST00000584010 MED1Q15648 1581 aaPredicted RBP9.21□□□□□ -0.93
DDX42-217ENST00000584010 MROH2AA6NES4 1674 aa9.21□□□□□ -0.93
DDX42-217ENST00000584010 NBR1Q14596 966 aa9.21□□□□□ -0.94
DDX42-217ENST00000584010 MRS2Q9HD23 443 aa9.21□□□□□ -0.94
DDX42-217ENST00000584010 AAMPQ13685 434 aa9.2□□□□□ -0.94
DDX42-217ENST00000584010 IDI1Q13907 227 aa9.2□□□□□ -0.94
DDX42-217ENST00000584010 KDM5DQ9BY66 1539 aa9.2□□□□□ -0.94
DDX42-217ENST00000584010 NUTM2BA6NNL0 878 aaPredicted RBP9.2□□□□□ -0.94
DDX42-217ENST00000584010 NUTM2EB1AL46 878 aaPredicted RBP9.2□□□□□ -0.94
DDX42-217ENST00000584010 POTEAQ6S8J7 498 aa9.2□□□□□ -0.94
DDX42-217ENST00000584010 NUTM2AQ8IVF1 878 aaPredicted RBP9.2□□□□□ -0.94
DDX42-217ENST00000584010 WASHC2AQ641Q2 1341 aa9.2□□□□□ -0.94
DDX42-217ENST00000584010 NOP58Q9Y2X3 529 aaKnown RBP9.2□□□□□ -0.94
DDX42-217ENST00000584010 INO80Q9ULG1 1556 aaPredicted RBP9.2□□□□□ -0.94
DDX42-217ENST00000584010 TMEM94Q12767 1356 aa9.19□□□□□ -0.94
DDX42-217ENST00000584010 HDGFP51858 240 aaKnown RBP9.19□□□□□ -0.94
DDX42-217ENST00000584010 RBM10P98175 930 aaKnown RBP9.19□□□□□ -0.94
DDX42-217ENST00000584010 KCNA6P17658 529 aa9.18□□□□□ -0.94
DDX42-217ENST00000584010 SLAIN2Q9P270 581 aa9.18□□□□□ -0.94
DDX42-217ENST00000584010 PLXNC1O60486 1568 aa9.18□□□□□ -0.94
DDX42-217ENST00000584010 KIF15Q9NS87 1388 aa9.18□□□□□ -0.94
DDX42-217ENST00000584010 RGS17Q9UGC6 210 aaPredicted RBP9.18□□□□□ -0.94
DDX42-217ENST00000584010 BCL11BQ9C0K0 894 aaPredicted RBP9.18□□□□□ -0.94
DDX42-217ENST00000584010 ADGBQ8N7X0 1667 aa9.18□□□□□ -0.94
DDX42-217ENST00000584010 ATF3P18847 181 aa9.17□□□□□ -0.94
DDX42-217ENST00000584010 SCAF11Q99590 1463 aaKnown RBP9.17□□□□□ -0.94
DDX42-217ENST00000584010 LRRC7Q96NW7 1537 aa9.17□□□□□ -0.94
DDX42-217ENST00000584010 MSH6P52701 1360 aa9.17□□□□□ -0.94
DDX42-217ENST00000584010 C11orf95C9JLR9 678 aaPredicted RBP9.16□□□□□ -0.94
DDX42-217ENST00000584010 TMEM2Q9UHN6 1383 aa9.14□□□□□ -0.95
DDX42-217ENST00000584010 ZNF142P52746 1687 aaPredicted RBP9.14□□□□□ -0.95
DDX42-217ENST00000584010 ERVK-7P63135 1459 aa9.14□□□□□ -0.95
DDX42-217ENST00000584010 DAPK1P53355 1430 aa9.14□□□□□ -0.95
DDX42-217ENST00000584010 NEURL4Q96JN8 1562 aa9.13□□□□□ -0.95
DDX42-217ENST00000584010 SLC52A1Q9NWF4 448 aa9.13□□□□□ -0.95
DDX42-217ENST00000584010 MED14O60244 1454 aa9.13□□□□□ -0.95
DDX42-217ENST00000584010 SENP3-EIF4A1A0A087X0R7 540 aa9.13□□□□□ -0.95
DDX42-217ENST00000584010 ANKRD30AQ9BXX3 1397 aa9.13□□□□□ -0.95
DDX42-217ENST00000584010 E9PCH4 1651 aa9.13□□□□□ -0.95
DDX42-217ENST00000584010 PRKRIP1Q9H875 184 aaPredicted RBP9.12□□□□□ -0.95
DDX42-217ENST00000584010 CCDC7Q96M83 1385 aa9.12□□□□□ -0.95
DDX42-217ENST00000584010 VWDEQ8N2E2 1590 aa9.12□□□□□ -0.95
DDX42-217ENST00000584010 NBPF8Q3BBV2 869 aa9.12□□□□□ -0.95
DDX42-217ENST00000584010 GCC2Q8IWJ2 1684 aa9.12□□□□□ -0.95
DDX42-217ENST00000584010 CCDC184Q52MB2 194 aa9.12□□□□□ -0.95
DDX42-217ENST00000584010 KDM2AQ9Y2K7 1162 aa9.12□□□□□ -0.95
DDX42-217ENST00000584010 ABCC3O15438 1527 aa9.12□□□□□ -0.95
DDX42-217ENST00000584010 ZNF772Q68DY9 489 aaPredicted RBP9.11□□□□□ -0.95
DDX42-217ENST00000584010 RXRBP28702 533 aa9.11□□□□□ -0.95
DDX42-217ENST00000584010 CADPS2Q86UW7 1296 aa9.11□□□□□ -0.95
DDX42-217ENST00000584010 FAM135BQ49AJ0 1406 aa9.11□□□□□ -0.95
DDX42-217ENST00000584010 IQGAP1P46940 1657 aa9.1□□□□□ -0.95
DDX42-217ENST00000584010 ABCC5O15440 1437 aa9.1□□□□□ -0.95
DDX42-217ENST00000584010 KIF7Q2M1P5 1343 aa9.1□□□□□ -0.95
DDX42-217ENST00000584010 USP35Q9P2H5 1018 aa9.1□□□□□ -0.95
DDX42-217ENST00000584010 JCADQ9P266 1359 aa9.09□□□□□ -0.95
DDX42-217ENST00000584010 RRP9O43818 475 aaKnown RBP9.09□□□□□ -0.95
DDX42-217ENST00000584010 HSP90AA2PQ14568 343 aaPredicted RBP9.09□□□□□ -0.95
DDX42-217ENST00000584010 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.09□□□□□ -0.95
DDX42-217ENST00000584010 ANKRD30BQ9BXX2 1392 aa9.09□□□□□ -0.95
DDX42-217ENST00000584010 C19orf44Q9H6X5 657 aa9.09□□□□□ -0.95
DDX42-217ENST00000584010 ROCK1Q13464 1354 aa9.09□□□□□ -0.95
DDX42-217ENST00000584010 C8orf37Q96NL8 207 aa9.09□□□□□ -0.95
DDX42-217ENST00000584010 ADAMTS2O95450 1211 aa9.08□□□□□ -0.96
DDX42-217ENST00000584010 RPRD2Q5VT52 1461 aaKnown RBP9.08□□□□□ -0.96
DDX42-217ENST00000584010 B4GALNT3Q6L9W6 998 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms