RNA–Protein interactions for RNA: ENST00000583066.5

NDEL1-216, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5

Gene NDEL1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-216ENST00000583066 UBR1Q8IWV7 1749 aa10.07□□□□□ -0.8
NDEL1-216ENST00000583066 HNRNPMP52272 730 aaKnown RBP eCLIP10.07□□□□□ -0.8
NDEL1-216ENST00000583066 RBM33Q96EV2 1170 aaKnown RBP10.07□□□□□ -0.8
NDEL1-216ENST00000583066 CDK11AQ9UQ88 783 aaPredicted RBP10.07□□□□□ -0.8
NDEL1-216ENST00000583066 SHPRHQ149N8 1683 aa10.06□□□□□ -0.8
NDEL1-216ENST00000583066 LRRC9Q6ZRR7 1453 aa10.06□□□□□ -0.8
NDEL1-216ENST00000583066 SCAF11Q99590 1463 aaKnown RBP10.06□□□□□ -0.8
NDEL1-216ENST00000583066 MEX3CQ5U5Q3 659 aaKnown RBP10.06□□□□□ -0.8
NDEL1-216ENST00000583066 ZNF777Q9ULD5 760 aaPredicted RBP10.06□□□□□ -0.8
NDEL1-216ENST00000583066 CEP162Q5TB80 1403 aa10.05□□□□□ -0.8
NDEL1-216ENST00000583066 TIAM1Q13009 1591 aa10.05□□□□□ -0.8
NDEL1-216ENST00000583066 ZRANB1Q9UGI0 708 aa10.04□□□□□ -0.8
NDEL1-216ENST00000583066 LTKP29376 864 aa10.03□□□□□ -0.8
NDEL1-216ENST00000583066 LRP5O75197 1615 aa10.03□□□□□ -0.8
NDEL1-216ENST00000583066 NCOA2Q15596 1464 aa10.03□□□□□ -0.8
NDEL1-216ENST00000583066 FMN1Q68DA7 1419 aa10.02□□□□□ -0.81
NDEL1-216ENST00000583066 SPATA31A6Q5VVP1 1343 aa10.02□□□□□ -0.81
NDEL1-216ENST00000583066 GPATCH8Q9UKJ3 1502 aaKnown RBP10.02□□□□□ -0.81
NDEL1-216ENST00000583066 FGD6Q6ZV73 1430 aa10.01□□□□□ -0.81
NDEL1-216ENST00000583066 EP400Q96L91 3159 aa10.01□□□□□ -0.81
NDEL1-216ENST00000583066 MNX1P50219 401 aaPredicted RBP10.01□□□□□ -0.81
NDEL1-216ENST00000583066 MIER1Q8N108 512 aa10.01□□□□□ -0.81
NDEL1-216ENST00000583066 ARHGAP35Q9NRY4 1499 aa10.01□□□□□ -0.81
NDEL1-216ENST00000583066 ARHGAP23Q9P227 1491 aa10.01□□□□□ -0.81
NDEL1-216ENST00000583066 CFAP65Q6ZU64 1925 aaKnown RBP10.01□□□□□ -0.81
NDEL1-216ENST00000583066 AFF2P51816 1311 aa10.01□□□□□ -0.81
NDEL1-216ENST00000583066 NUTM2BA6NNL0 878 aaPredicted RBP10□□□□□ -0.81
NDEL1-216ENST00000583066 NUTM2EB1AL46 878 aaPredicted RBP10□□□□□ -0.81
NDEL1-216ENST00000583066 UBTFP17480 764 aaKnown RBP10□□□□□ -0.81
NDEL1-216ENST00000583066 VASPP50552 380 aaPredicted RBP10□□□□□ -0.81
NDEL1-216ENST00000583066 NUTM2DQ5VT03 806 aaPredicted RBP10□□□□□ -0.81
NDEL1-216ENST00000583066 NUTM2AQ8IVF1 878 aaPredicted RBP10□□□□□ -0.81
NDEL1-216ENST00000583066 SLIT1O75093 1534 aa10□□□□□ -0.81
NDEL1-216ENST00000583066 DIP2AQ14689 1571 aa10□□□□□ -0.81
NDEL1-216ENST00000583066 KIAA1107Q9UPP5 1409 aa9.99□□□□□ -0.81
NDEL1-216ENST00000583066 PRDM15P57071 1507 aaPredicted RBP9.99□□□□□ -0.81
NDEL1-216ENST00000583066 GABBR2O75899 941 aa9.99□□□□□ -0.81
NDEL1-216ENST00000583066 FARP1Q9Y4F1 1045 aaPredicted RBP9.99□□□□□ -0.81
NDEL1-216ENST00000583066 AHDC1Q5TGY3 1603 aaPredicted RBP9.99□□□□□ -0.81
NDEL1-216ENST00000583066 KDM5AP29375 1690 aaKnown RBP9.99□□□□□ -0.81
NDEL1-216ENST00000583066 ERVK-7P63135 1459 aa9.98□□□□□ -0.81
NDEL1-216ENST00000583066 NWD1Q149M9 1564 aa9.98□□□□□ -0.81
NDEL1-216ENST00000583066 KIF3BO15066 747 aa9.98□□□□□ -0.81
NDEL1-216ENST00000583066 SLAIN2Q9P270 581 aa9.98□□□□□ -0.81
NDEL1-216ENST00000583066 WASHC2CQ9Y4E1 1318 aa9.98□□□□□ -0.81
NDEL1-216ENST00000583066 DHX29Q7Z478 1369 aaKnown RBP9.98□□□□□ -0.81
NDEL1-216ENST00000583066 C19orf67A6NJJ6 358 aa9.97□□□□□ -0.81
NDEL1-216ENST00000583066 PLCD3Q8N3E9 789 aa9.97□□□□□ -0.81
NDEL1-216ENST00000583066 ATAD2Q6PL18 1390 aa9.97□□□□□ -0.81
NDEL1-216ENST00000583066 ABCC3O15438 1527 aa9.97□□□□□ -0.81
NDEL1-216ENST00000583066 TXNDC2Q86VQ3 553 aa9.96□□□□□ -0.82
NDEL1-216ENST00000583066 PROSER2Q86WR7 435 aaPredicted RBP9.96□□□□□ -0.82
NDEL1-216ENST00000583066 PLEKHH2Q8IVE3 1493 aa9.96□□□□□ -0.82
NDEL1-216ENST00000583066 MSH6P52701 1360 aa9.95□□□□□ -0.82
NDEL1-216ENST00000583066 NKTRP30414 1462 aaKnown RBP9.95□□□□□ -0.82
NDEL1-216ENST00000583066 MAST1Q9Y2H9 1570 aa9.95□□□□□ -0.82
NDEL1-216ENST00000583066 CEP152O94986 1710 aa9.95□□□□□ -0.82
NDEL1-216ENST00000583066 MBD5Q9P267 1494 aa9.94□□□□□ -0.82
NDEL1-216ENST00000583066 ZNF644Q9H582 1327 aaPredicted RBP9.94□□□□□ -0.82
NDEL1-216ENST00000583066 KCNA6P17658 529 aa9.94□□□□□ -0.82
NDEL1-216ENST00000583066 RBM6P78332 1123 aaKnown RBP9.94□□□□□ -0.82
NDEL1-216ENST00000583066 TET3O43151 1660 aa9.93□□□□□ -0.82
NDEL1-216ENST00000583066 PIK3C2BO00750 1634 aa9.93□□□□□ -0.82
NDEL1-216ENST00000583066 QTRT2Q9H974 415 aaKnown RBP9.93□□□□□ -0.82
NDEL1-216ENST00000583066 CCDC18Q5T9S5 1454 aa9.92□□□□□ -0.82
NDEL1-216ENST00000583066 PLEKHG5O94827 1062 aa9.92□□□□□ -0.82
NDEL1-216ENST00000583066 IFFO2Q5TF58 517 aa9.92□□□□□ -0.82
NDEL1-216ENST00000583066 SLC26A8Q96RN1 970 aa9.92□□□□□ -0.82
NDEL1-216ENST00000583066 RTEL1-TNFRSF6BF6WH68 1400 aa9.91□□□□□ -0.82
NDEL1-216ENST00000583066 C8orf37Q96NL8 207 aa9.91□□□□□ -0.82
NDEL1-216ENST00000583066 CFDP1Q9UEE9 299 aaPredicted RBP9.91□□□□□ -0.82
NDEL1-216ENST00000583066 MROH1Q8NDA8 1641 aa9.91□□□□□ -0.82
NDEL1-216ENST00000583066 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.9□□□□□ -0.82
NDEL1-216ENST00000583066 NHSL1Q5SYE7 1610 aa9.9□□□□□ -0.82
NDEL1-216ENST00000583066 IFNLR1Q8IU57 520 aaPredicted RBP9.9□□□□□ -0.82
NDEL1-216ENST00000583066 CAMSAP2Q08AD1 1489 aa9.9□□□□□ -0.83
NDEL1-216ENST00000583066 VPS8Q8N3P4 1428 aa9.9□□□□□ -0.83
NDEL1-216ENST00000583066 TMEM2Q9UHN6 1383 aa9.89□□□□□ -0.83
NDEL1-216ENST00000583066 CASKIN1Q8WXD9 1431 aa9.89□□□□□ -0.83
NDEL1-216ENST00000583066 CHD2O14647 1828 aaKnown RBP9.89□□□□□ -0.83
NDEL1-216ENST00000583066 PPARGC1BQ86YN6 1023 aaKnown RBP9.88□□□□□ -0.83
NDEL1-216ENST00000583066 EID1Q9Y6B2 187 aa9.87□□□□□ -0.83
NDEL1-216ENST00000583066 CCNB3Q8WWL7 1395 aa9.87□□□□□ -0.83
NDEL1-216ENST00000583066 ZBTB47Q9UFB7 747 aaPredicted RBP9.86□□□□□ -0.83
NDEL1-216ENST00000583066 YY1P25490 414 aa9.85□□□□□ -0.83
NDEL1-216ENST00000583066 CLCN6P51797 869 aa9.85□□□□□ -0.83
NDEL1-216ENST00000583066 DEFB132Q7Z7B7 95 aa9.85□□□□□ -0.83
NDEL1-216ENST00000583066 EFCAB6Q5THR3 1501 aa9.85□□□□□ -0.83
NDEL1-216ENST00000583066 BCL9LQ86UU0 1499 aa9.85□□□□□ -0.83
NDEL1-216ENST00000583066 SETD5Q9C0A6 1442 aa9.84□□□□□ -0.83
NDEL1-216ENST00000583066 ASXL1Q8IXJ9 1541 aa9.84□□□□□ -0.83
NDEL1-216ENST00000583066 PSDA5PKW4 1024 aaPredicted RBP9.84□□□□□ -0.83
NDEL1-216ENST00000583066 BRINP3Q76B58 766 aa9.84□□□□□ -0.83
NDEL1-216ENST00000583066 CCDC141Q6ZP82 1450 aa9.84□□□□□ -0.83
NDEL1-216ENST00000583066 CCER1Q8TC90 406 aaPredicted RBP9.83□□□□□ -0.84
NDEL1-216ENST00000583066 NGLY1Q96IV0 654 aa9.83□□□□□ -0.84
NDEL1-216ENST00000583066 PNPLA6Q8IY17 1366 aa9.83□□□□□ -0.84
NDEL1-216ENST00000583066 ADAMTS2O95450 1211 aa9.82□□□□□ -0.84
NDEL1-216ENST00000583066 NUBP1P53384 320 aa9.82□□□□□ -0.84
NDEL1-216ENST00000583066 EIF2AK4Q9P2K8 1649 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms