RNA–Protein interactions for RNA: ENST00000579638.5

PPP4R1-214, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-214ENST00000579638 NLRP1Q9C000 1473 aa11.23□□□□□ -0.61
PPP4R1-214ENST00000579638 FAM135AQ9P2D6 1515 aa11.23□□□□□ -0.61
PPP4R1-214ENST00000579638 ZC3H13Q5T200 1668 aaKnown RBP11.23□□□□□ -0.61
PPP4R1-214ENST00000579638 LOC105371045A0A1W2PR82 267 aa11.22□□□□□ -0.61
PPP4R1-214ENST00000579638 CFDP1Q9UEE9 299 aaPredicted RBP11.22□□□□□ -0.61
PPP4R1-214ENST00000579638 CFAP65Q6ZU64 1925 aaKnown RBP11.21□□□□□ -0.61
PPP4R1-214ENST00000579638 DHX29Q7Z478 1369 aaKnown RBP11.21□□□□□ -0.61
PPP4R1-214ENST00000579638 KIF3BO15066 747 aa11.21□□□□□ -0.61
PPP4R1-214ENST00000579638 KDM5DQ9BY66 1539 aa11.2□□□□□ -0.62
PPP4R1-214ENST00000579638 FAM135BQ49AJ0 1406 aa11.2□□□□□ -0.62
PPP4R1-214ENST00000579638 CHADLQ6NUI6 762 aa11.2□□□□□ -0.62
PPP4R1-214ENST00000579638 PAXIP1Q6ZW49 1069 aaPredicted RBP11.2□□□□□ -0.62
PPP4R1-214ENST00000579638 RNF25Q96BH1 459 aaPredicted RBP11.2□□□□□ -0.62
PPP4R1-214ENST00000579638 ZNF644Q9H582 1327 aaPredicted RBP11.19□□□□□ -0.62
PPP4R1-214ENST00000579638 WASHC2CQ9Y4E1 1318 aa11.19□□□□□ -0.62
PPP4R1-214ENST00000579638 UPF1Q92900 1129 aaKnown RBP eCLIP11.18□□□□□ -0.62
PPP4R1-214ENST00000579638 CFAP44Q96MT7 982 aa11.18□□□□□ -0.62
PPP4R1-214ENST00000579638 TAOK2Q9UL54 1235 aa11.18□□□□□ -0.62
PPP4R1-214ENST00000579638 MBD5Q9P267 1494 aa11.18□□□□□ -0.62
PPP4R1-214ENST00000579638 RTEL1-TNFRSF6BF6WH68 1400 aa11.18□□□□□ -0.62
PPP4R1-214ENST00000579638 CCNB3Q8WWL7 1395 aa11.17□□□□□ -0.62
PPP4R1-214ENST00000579638 RIOK3O14730 519 aaKnown RBP11.17□□□□□ -0.62
PPP4R1-214ENST00000579638 ROBO1Q9Y6N7 1651 aa11.17□□□□□ -0.62
PPP4R1-214ENST00000579638 CHRM1P11229 460 aaPredicted RBP11.16□□□□□ -0.62
PPP4R1-214ENST00000579638 HS6ST3Q8IZP7 471 aa11.15□□□□□ -0.62
PPP4R1-214ENST00000579638 UBR1Q8IWV7 1749 aa11.15□□□□□ -0.63
PPP4R1-214ENST00000579638 FYCO1Q9BQS8 1478 aa11.14□□□□□ -0.63
PPP4R1-214ENST00000579638 LTKP29376 864 aa11.14□□□□□ -0.63
PPP4R1-214ENST00000579638 SPRYD3Q8NCJ5 442 aa11.14□□□□□ -0.63
PPP4R1-214ENST00000579638 FARP1Q9Y4F1 1045 aaPredicted RBP11.14□□□□□ -0.63
PPP4R1-214ENST00000579638 SCAF11Q99590 1463 aaKnown RBP11.13□□□□□ -0.63
PPP4R1-214ENST00000579638 SRCAPQ6ZRS2 3230 aa11.13□□□□□ -0.63
PPP4R1-214ENST00000579638 PRKAR2AP13861 404 aaKnown RBP11.12□□□□□ -0.63
PPP4R1-214ENST00000579638 NCOA2Q15596 1464 aa11.12□□□□□ -0.63
PPP4R1-214ENST00000579638 TIAM1Q13009 1591 aa11.11□□□□□ -0.63
PPP4R1-214ENST00000579638 PYGBP11216 843 aa11.11□□□□□ -0.63
PPP4R1-214ENST00000579638 TXNDC2Q86VQ3 553 aa11.11□□□□□ -0.63
PPP4R1-214ENST00000579638 VSIG10Q8N0Z9 540 aa11.11□□□□□ -0.63
PPP4R1-214ENST00000579638 PHLPP1O60346 1717 aa11.11□□□□□ -0.63
PPP4R1-214ENST00000579638 TMEM94Q12767 1356 aa11.11□□□□□ -0.63
PPP4R1-214ENST00000579638 VGFO15240 615 aaPredicted RBP11.1□□□□□ -0.63
PPP4R1-214ENST00000579638 FXR2P51116 673 aaKnown RBP eCLIP11.1□□□□□ -0.63
PPP4R1-214ENST00000579638 TRIM52Q96A61 297 aa11.1□□□□□ -0.63
PPP4R1-214ENST00000579638 ERVK-7P63135 1459 aa11.1□□□□□ -0.63
PPP4R1-214ENST00000579638 ARHGAP23Q9P227 1491 aa11.1□□□□□ -0.63
PPP4R1-214ENST00000579638 SLIT1O75093 1534 aa11.09□□□□□ -0.63
PPP4R1-214ENST00000579638 RBM33Q96EV2 1170 aaKnown RBP11.09□□□□□ -0.63
PPP4R1-214ENST00000579638 TSPYL2Q9H2G4 693 aaPredicted RBP11.09□□□□□ -0.63
PPP4R1-214ENST00000579638 ABCC3O15438 1527 aa11.09□□□□□ -0.63
PPP4R1-214ENST00000579638 MAP3K1Q13233 1512 aa11.09□□□□□ -0.63
PPP4R1-214ENST00000579638 MTUS2Q5JR59 1369 aa11.08□□□□□ -0.64
PPP4R1-214ENST00000579638 JCADQ9P266 1359 aa11.08□□□□□ -0.64
PPP4R1-214ENST00000579638 CCDC141Q6ZP82 1450 aa11.07□□□□□ -0.64
PPP4R1-214ENST00000579638 CEP152O94986 1710 aa11.07□□□□□ -0.64
PPP4R1-214ENST00000579638 LRP6O75581 1613 aa11.07□□□□□ -0.64
PPP4R1-214ENST00000579638 KCNA6P17658 529 aa11.06□□□□□ -0.64
PPP4R1-214ENST00000579638 PROSER2Q86WR7 435 aaPredicted RBP11.06□□□□□ -0.64
PPP4R1-214ENST00000579638 LRRC9Q6ZRR7 1453 aa11.06□□□□□ -0.64
PPP4R1-214ENST00000579638 COL16A1Q07092 1604 aaPredicted RBP11.06□□□□□ -0.64
PPP4R1-214ENST00000579638 STK25O00506 426 aa11.05□□□□□ -0.64
PPP4R1-214ENST00000579638 ZNF772Q68DY9 489 aaPredicted RBP11.05□□□□□ -0.64
PPP4R1-214ENST00000579638 CHRDL2Q6WN34 429 aa11.05□□□□□ -0.64
PPP4R1-214ENST00000579638 SLAIN2Q9P270 581 aa11.05□□□□□ -0.64
PPP4R1-214ENST00000579638 EID1Q9Y6B2 187 aa11.05□□□□□ -0.64
PPP4R1-214ENST00000579638 MROH1Q8NDA8 1641 aa11.04□□□□□ -0.64
PPP4R1-214ENST00000579638 RSPH4AQ5TD94 716 aa11.03□□□□□ -0.64
PPP4R1-214ENST00000579638 SGIP1Q9BQI5 828 aa11.03□□□□□ -0.64
PPP4R1-214ENST00000579638 CAMSAP2Q08AD1 1489 aa11.03□□□□□ -0.64
PPP4R1-214ENST00000579638 PRDM15P57071 1507 aaPredicted RBP11.03□□□□□ -0.64
PPP4R1-214ENST00000579638 PIK3C2BO00750 1634 aa11.02□□□□□ -0.64
PPP4R1-214ENST00000579638 TET3O43151 1660 aa11.02□□□□□ -0.64
PPP4R1-214ENST00000579638 RXRBP28702 533 aa11.02□□□□□ -0.65
PPP4R1-214ENST00000579638 MEX3CQ5U5Q3 659 aaKnown RBP11.02□□□□□ -0.65
PPP4R1-214ENST00000579638 PELP1Q8IZL8 1130 aaKnown RBP11.02□□□□□ -0.65
PPP4R1-214ENST00000579638 SLC26A8Q96RN1 970 aa11.02□□□□□ -0.65
PPP4R1-214ENST00000579638 SPATA31A6Q5VVP1 1343 aa11.02□□□□□ -0.65
PPP4R1-214ENST00000579638 TMEM2Q9UHN6 1383 aa11.02□□□□□ -0.65
PPP4R1-214ENST00000579638 CEP162Q5TB80 1403 aa11.01□□□□□ -0.65
PPP4R1-214ENST00000579638 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.01□□□□□ -0.65
PPP4R1-214ENST00000579638 ZFP91Q96JP5 570 aaPredicted RBP11.01□□□□□ -0.65
PPP4R1-214ENST00000579638 MSH6P52701 1360 aa11.01□□□□□ -0.65
PPP4R1-214ENST00000579638 CDK12Q9NYV4 1490 aaPredicted RBP11□□□□□ -0.65
PPP4R1-214ENST00000579638 EHBP1L1Q8N3D4 1523 aa11□□□□□ -0.65
PPP4R1-214ENST00000579638 ARHGEF5Q12774 1597 aa11□□□□□ -0.65
PPP4R1-214ENST00000579638 NWD1Q149M9 1564 aa11□□□□□ -0.65
PPP4R1-214ENST00000579638 EIF2AK4Q9P2K8 1649 aaKnown RBP11□□□□□ -0.65
PPP4R1-214ENST00000579638 TSPY4P0CV99 314 aa11□□□□□ -0.65
PPP4R1-214ENST00000579638 TSPY10P0CW01 314 aa11□□□□□ -0.65
PPP4R1-214ENST00000579638 PIP4P2Q8N4L2 257 aa11□□□□□ -0.65
PPP4R1-214ENST00000579638 FGD6Q6ZV73 1430 aa11□□□□□ -0.65
PPP4R1-214ENST00000579638 NKTRP30414 1462 aaKnown RBP11□□□□□ -0.65
PPP4R1-214ENST00000579638 SHPRHQ149N8 1683 aa10.99□□□□□ -0.65
PPP4R1-214ENST00000579638 MYT1Q01538 1121 aa10.99□□□□□ -0.65
PPP4R1-214ENST00000579638 TSHZ2Q9NRE2 1034 aa10.99□□□□□ -0.65
PPP4R1-214ENST00000579638 CHD2O14647 1828 aaKnown RBP10.98□□□□□ -0.65
PPP4R1-214ENST00000579638 NKX1-1Q15270 411 aaPredicted RBP10.98□□□□□ -0.65
PPP4R1-214ENST00000579638 BCL11BQ9C0K0 894 aaPredicted RBP10.98□□□□□ -0.65
PPP4R1-214ENST00000579638 STK24Q9Y6E0 443 aa10.98□□□□□ -0.65
PPP4R1-214ENST00000579638 ARHGAP31Q2M1Z3 1444 aa10.98□□□□□ -0.65
PPP4R1-214ENST00000579638 KDM5AP29375 1690 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms