RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 CLSPNQ9HAW4 1339 aa16.39■□□□□ 0.21
TRAPPC8-204ENST00000578252 TRPM2O94759 1503 aa16.39■□□□□ 0.21
TRAPPC8-204ENST00000578252 PTPRTO14522 1441 aa16.38■□□□□ 0.21
TRAPPC8-204ENST00000578252 ERVK-7P63135 1459 aa16.38■□□□□ 0.21
TRAPPC8-204ENST00000578252 SPDYE4A6NLX3 237 aa16.38■□□□□ 0.21
TRAPPC8-204ENST00000578252 NOS1P29475 1434 aa16.37■□□□□ 0.21
TRAPPC8-204ENST00000578252 CFAP65Q6ZU64 1925 aaKnown RBP16.37■□□□□ 0.21
TRAPPC8-204ENST00000578252 PTPRMP28827 1452 aa16.36■□□□□ 0.21
TRAPPC8-204ENST00000578252 CCER1Q8TC90 406 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC8-204ENST00000578252 ANKRD30BQ9BXX2 1392 aa16.35■□□□□ 0.21
TRAPPC8-204ENST00000578252 SYNMO15061 1565 aa16.34■□□□□ 0.21
TRAPPC8-204ENST00000578252 PIK3C2BO00750 1634 aa16.34■□□□□ 0.21
TRAPPC8-204ENST00000578252 CCDC144AA2RUR9 1427 aa16.33■□□□□ 0.2
TRAPPC8-204ENST00000578252 PLA2R1Q13018 1463 aa16.33■□□□□ 0.2
TRAPPC8-204ENST00000578252 TNRQ92752 1358 aa16.32■□□□□ 0.2
TRAPPC8-204ENST00000578252 CLTCL1P53675 1640 aa16.31■□□□□ 0.2
TRAPPC8-204ENST00000578252 KDM4FA0A1W2PPD8 638 aa16.31■□□□□ 0.2
TRAPPC8-204ENST00000578252 SLC52A1Q9NWF4 448 aa16.31■□□□□ 0.2
TRAPPC8-204ENST00000578252 SETD1BQ9UPS6 1966 aaKnown RBP16.31■□□□□ 0.2
TRAPPC8-204ENST00000578252 NLRP1Q9C000 1473 aa16.3■□□□□ 0.2
TRAPPC8-204ENST00000578252 FBXO31Q5XUX0 539 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC8-204ENST00000578252 KIF1BO60333 1816 aa16.3■□□□□ 0.2
TRAPPC8-204ENST00000578252 CEBPAP49715 358 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC8-204ENST00000578252 KDM5AP29375 1690 aaKnown RBP16.29■□□□□ 0.2
TRAPPC8-204ENST00000578252 MYO3AQ8NEV4 1616 aa16.29■□□□□ 0.2
TRAPPC8-204ENST00000578252 NEURL4Q96JN8 1562 aa16.28■□□□□ 0.2
TRAPPC8-204ENST00000578252 ZNF142P52746 1687 aaPredicted RBP16.27■□□□□ 0.19
TRAPPC8-204ENST00000578252 UGGT1Q9NYU2 1555 aa16.26■□□□□ 0.19
TRAPPC8-204ENST00000578252 ADGRB3O60242 1522 aa16.25■□□□□ 0.19
TRAPPC8-204ENST00000578252 A2ML1A8K2U0 1454 aa16.23■□□□□ 0.19
TRAPPC8-204ENST00000578252 CEP170BQ9Y4F5 1589 aaPredicted RBP16.23■□□□□ 0.19
TRAPPC8-204ENST00000578252 TMEM131LA2VDJ0 1609 aa16.23■□□□□ 0.19
TRAPPC8-204ENST00000578252 UBR1Q8IWV7 1749 aa16.22■□□□□ 0.19
TRAPPC8-204ENST00000578252 UHRF1BP1Q6BDS2 1440 aa16.22■□□□□ 0.19
TRAPPC8-204ENST00000578252 IDI1Q13907 227 aa16.22■□□□□ 0.19
TRAPPC8-204ENST00000578252 PRR29P0C7W0 189 aa16.21■□□□□ 0.19
TRAPPC8-204ENST00000578252 SPATA31E1Q6ZUB1 1445 aa16.2■□□□□ 0.18
TRAPPC8-204ENST00000578252 PRKAR2AP13861 404 aaKnown RBP16.2■□□□□ 0.18
TRAPPC8-204ENST00000578252 MYO5BQ9ULV0 1848 aa16.19■□□□□ 0.18
TRAPPC8-204ENST00000578252 SIN3AQ96ST3 1273 aa16.19■□□□□ 0.18
TRAPPC8-204ENST00000578252 STAG3Q9UJ98 1225 aa16.19■□□□□ 0.18
TRAPPC8-204ENST00000578252 TIMELESSQ9UNS1 1208 aa16.19■□□□□ 0.18
TRAPPC8-204ENST00000578252 NEUROD1Q13562 356 aa16.18■□□□□ 0.18
TRAPPC8-204ENST00000578252 TONSLQ96HA7 1378 aa16.17■□□□□ 0.18
TRAPPC8-204ENST00000578252 CHGAP10645 457 aaKnown RBP16.17■□□□□ 0.18
TRAPPC8-204ENST00000578252 IFT172Q9UG01 1749 aa16.16■□□□□ 0.18
TRAPPC8-204ENST00000578252 RPGRIP1LQ68CZ1 1315 aa16.16■□□□□ 0.18
TRAPPC8-204ENST00000578252 THEMISQ8N1K5 641 aaPredicted RBP16.15■□□□□ 0.18
TRAPPC8-204ENST00000578252 PPLO60437 1756 aa16.15■□□□□ 0.18
TRAPPC8-204ENST00000578252 STAC3Q96MF2 364 aa16.14■□□□□ 0.17
TRAPPC8-204ENST00000578252 SLIT1O75093 1534 aa16.14■□□□□ 0.17
TRAPPC8-204ENST00000578252 ZNF326Q5BKZ1 582 aaKnown RBP16.13■□□□□ 0.17
TRAPPC8-204ENST00000578252 NEXMIFQ5QGS0 1516 aa16.13■□□□□ 0.17
TRAPPC8-204ENST00000578252 ARHGAP23Q9P227 1491 aa16.12■□□□□ 0.17
TRAPPC8-204ENST00000578252 TMEM2Q9UHN6 1383 aa16.12■□□□□ 0.17
TRAPPC8-204ENST00000578252 MYOM2P54296 1465 aa16.11■□□□□ 0.17
TRAPPC8-204ENST00000578252 HDGFP51858 240 aaKnown RBP16.11■□□□□ 0.17
TRAPPC8-204ENST00000578252 RGL3Q3MIN7 710 aa16.11■□□□□ 0.17
TRAPPC8-204ENST00000578252 RIMS2Q9UQ26 1411 aa16.11■□□□□ 0.17
TRAPPC8-204ENST00000578252 LMTK3Q96Q04 1460 aa16.1■□□□□ 0.17
TRAPPC8-204ENST00000578252 ZEB1P37275 1124 aaPredicted RBP16.1■□□□□ 0.17
TRAPPC8-204ENST00000578252 CHADLQ6NUI6 762 aa16.1■□□□□ 0.17
TRAPPC8-204ENST00000578252 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.1■□□□□ 0.17
TRAPPC8-204ENST00000578252 ZFYVE9O95405 1425 aa16.1■□□□□ 0.17
TRAPPC8-204ENST00000578252 L3MBTL2Q969R5 705 aa16.09■□□□□ 0.17
TRAPPC8-204ENST00000578252 POLR1AO95602 1720 aaPredicted RBP16.08■□□□□ 0.17
TRAPPC8-204ENST00000578252 VGFO15240 615 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC8-204ENST00000578252 DCAF11Q8TEB1 546 aa16.07■□□□□ 0.16
TRAPPC8-204ENST00000578252 EID1Q9Y6B2 187 aa16.07■□□□□ 0.16
TRAPPC8-204ENST00000578252 HAX1O00165 279 aa16.06■□□□□ 0.16
TRAPPC8-204ENST00000578252 SCAF11Q99590 1463 aaKnown RBP16.05■□□□□ 0.16
TRAPPC8-204ENST00000578252 NRXN1Q9ULB1 1477 aa16.05■□□□□ 0.16
TRAPPC8-204ENST00000578252 PPP1R15AO75807 674 aaPredicted RBP16.04■□□□□ 0.16
TRAPPC8-204ENST00000578252 LAMC1P11047 1609 aa16.04■□□□□ 0.16
TRAPPC8-204ENST00000578252 ANKLE2Q86XL3 938 aa16.03■□□□□ 0.16
TRAPPC8-204ENST00000578252 PRAG1Q86YV5 1406 aa16.02■□□□□ 0.16
TRAPPC8-204ENST00000578252 KIAA1210Q9ULL0 1709 aa16.02■□□□□ 0.16
TRAPPC8-204ENST00000578252 SETBP1Q9Y6X0 1596 aa16.02■□□□□ 0.16
TRAPPC8-204ENST00000578252 TXNDC2Q86VQ3 553 aa16.02■□□□□ 0.16
TRAPPC8-204ENST00000578252 KDM2AQ9Y2K7 1162 aa16.02■□□□□ 0.16
TRAPPC8-204ENST00000578252 PLEKHG1Q9ULL1 1385 aa16.01■□□□□ 0.15
TRAPPC8-204ENST00000578252 MED14O60244 1454 aa16.01■□□□□ 0.15
TRAPPC8-204ENST00000578252 PIK3C2GO75747 1445 aa16.01■□□□□ 0.15
TRAPPC8-204ENST00000578252 PROM2Q8N271 834 aa16■□□□□ 0.15
TRAPPC8-204ENST00000578252 DIP2AQ14689 1571 aa16■□□□□ 0.15
TRAPPC8-204ENST00000578252 ADGRF5Q8IZF2 1346 aa15.99■□□□□ 0.15
TRAPPC8-204ENST00000578252 IQGAP1P46940 1657 aa15.99■□□□□ 0.15
TRAPPC8-204ENST00000578252 TRPM1Q7Z4N2 1603 aa15.99■□□□□ 0.15
TRAPPC8-204ENST00000578252 LTKP29376 864 aa15.99■□□□□ 0.15
TRAPPC8-204ENST00000578252 NRXN3Q9Y4C0 1643 aa15.98■□□□□ 0.15
TRAPPC8-204ENST00000578252 NUTM2DQ5VT03 806 aaPredicted RBP15.97■□□□□ 0.15
TRAPPC8-204ENST00000578252 STRCQ7RTU9 1775 aa15.97■□□□□ 0.15
TRAPPC8-204ENST00000578252 RALGAPBQ86X10 1494 aa15.97■□□□□ 0.15
TRAPPC8-204ENST00000578252 NPHP4O75161 1426 aaPredicted RBP15.96■□□□□ 0.15
TRAPPC8-204ENST00000578252 HSPA2P54652 639 aa15.96■□□□□ 0.15
TRAPPC8-204ENST00000578252 ALKQ9UM73 1620 aa15.96■□□□□ 0.15
TRAPPC8-204ENST00000578252 SETD1AO15047 1707 aaKnown RBP15.95■□□□□ 0.14
TRAPPC8-204ENST00000578252 BCANQ96GW7 911 aa15.94■□□□□ 0.14
TRAPPC8-204ENST00000578252 NCKAP5LQ9HCH0 1330 aa15.94■□□□□ 0.14
TRAPPC8-204ENST00000578252 FKBP8Q14318 412 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 881.4 ms