RNA–Protein interactions for RNA: ENST00000578217.1

SLC46A1-201, Transcript of solute carrier family 46 member 1, humanhuman

TSL 4

Gene SLC46A1, Length 596 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-201ENST00000578217 SLC26A8Q96RN1 970 aa13.14□□□□□ -0.31
SLC46A1-201ENST00000578217 KCNA6P17658 529 aa13.13□□□□□ -0.31
SLC46A1-201ENST00000578217 RBM42Q9BTD8 480 aaKnown RBP13.13□□□□□ -0.31
SLC46A1-201ENST00000578217 SLAIN2Q9P270 581 aa13.13□□□□□ -0.31
SLC46A1-201ENST00000578217 PIK3C2BO00750 1634 aa13.13□□□□□ -0.31
SLC46A1-201ENST00000578217 TET3O43151 1660 aa13.12□□□□□ -0.31
SLC46A1-201ENST00000578217 TMEM2Q9UHN6 1383 aa13.12□□□□□ -0.31
SLC46A1-201ENST00000578217 PRDM15P57071 1507 aaPredicted RBP13.12□□□□□ -0.31
SLC46A1-201ENST00000578217 CEP162Q5TB80 1403 aa13.12□□□□□ -0.31
SLC46A1-201ENST00000578217 LRRC9Q6ZRR7 1453 aa13.1□□□□□ -0.31
SLC46A1-201ENST00000578217 EHBP1L1Q8N3D4 1523 aa13.09□□□□□ -0.31
SLC46A1-201ENST00000578217 NWD1Q149M9 1564 aa13.09□□□□□ -0.31
SLC46A1-201ENST00000578217 EID1Q9Y6B2 187 aa13.09□□□□□ -0.31
SLC46A1-201ENST00000578217 ARHGEF5Q12774 1597 aa13.08□□□□□ -0.32
SLC46A1-201ENST00000578217 RXRBP28702 533 aa13.08□□□□□ -0.32
SLC46A1-201ENST00000578217 ZNF772Q68DY9 489 aaPredicted RBP13.08□□□□□ -0.32
SLC46A1-201ENST00000578217 CHRDL2Q6WN34 429 aa13.08□□□□□ -0.32
SLC46A1-201ENST00000578217 MEX3CQ5U5Q3 659 aaKnown RBP13.07□□□□□ -0.32
SLC46A1-201ENST00000578217 MSH6P52701 1360 aa13.07□□□□□ -0.32
SLC46A1-201ENST00000578217 NKTRP30414 1462 aaKnown RBP13.06□□□□□ -0.32
SLC46A1-201ENST00000578217 SPATA31A6Q5VVP1 1343 aa13.06□□□□□ -0.32
SLC46A1-201ENST00000578217 EIF2AK4Q9P2K8 1649 aaKnown RBP13.06□□□□□ -0.32
SLC46A1-201ENST00000578217 RGS12O14924 1447 aa13.05□□□□□ -0.32
SLC46A1-201ENST00000578217 CDK12Q9NYV4 1490 aaPredicted RBP13.05□□□□□ -0.32
SLC46A1-201ENST00000578217 IDI1Q13907 227 aa13.05□□□□□ -0.32
SLC46A1-201ENST00000578217 KDM5AP29375 1690 aaKnown RBP13.05□□□□□ -0.32
SLC46A1-201ENST00000578217 ARHGAP31Q2M1Z3 1444 aa13.05□□□□□ -0.32
SLC46A1-201ENST00000578217 FGD6Q6ZV73 1430 aa13.05□□□□□ -0.32
SLC46A1-201ENST00000578217 SHPRHQ149N8 1683 aa13.04□□□□□ -0.32
SLC46A1-201ENST00000578217 EFCAB6Q5THR3 1501 aa13.03□□□□□ -0.32
SLC46A1-201ENST00000578217 DIP2AQ14689 1571 aa13.03□□□□□ -0.32
SLC46A1-201ENST00000578217 MAST1Q9Y2H9 1570 aa13.03□□□□□ -0.32
SLC46A1-201ENST00000578217 SETBP1Q9Y6X0 1596 aa13.03□□□□□ -0.32
SLC46A1-201ENST00000578217 NUTM2BA6NNL0 878 aaPredicted RBP13.03□□□□□ -0.32
SLC46A1-201ENST00000578217 NUTM2EB1AL46 878 aaPredicted RBP13.03□□□□□ -0.32
SLC46A1-201ENST00000578217 TSPY4P0CV99 314 aa13.03□□□□□ -0.32
SLC46A1-201ENST00000578217 TSPY10P0CW01 314 aa13.03□□□□□ -0.32
SLC46A1-201ENST00000578217 RSPH4AQ5TD94 716 aa13.03□□□□□ -0.32
SLC46A1-201ENST00000578217 NUTM2AQ8IVF1 878 aaPredicted RBP13.03□□□□□ -0.32
SLC46A1-201ENST00000578217 AFF2P51816 1311 aa13.03□□□□□ -0.32
SLC46A1-201ENST00000578217 AHDC1Q5TGY3 1603 aaPredicted RBP13.02□□□□□ -0.32
SLC46A1-201ENST00000578217 EP400Q96L91 3159 aa13.02□□□□□ -0.32
SLC46A1-201ENST00000578217 CHD2O14647 1828 aaKnown RBP13.01□□□□□ -0.33
SLC46A1-201ENST00000578217 STAG3Q9UJ98 1225 aa12.99□□□□□ -0.33
SLC46A1-201ENST00000578217 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.99□□□□□ -0.33
SLC46A1-201ENST00000578217 DUOX2Q9NRD8 1548 aa12.97□□□□□ -0.33
SLC46A1-201ENST00000578217 NUTM2DQ5VT03 806 aaPredicted RBP12.96□□□□□ -0.33
SLC46A1-201ENST00000578217 BRINP3Q76B58 766 aa12.96□□□□□ -0.33
SLC46A1-201ENST00000578217 QTRT2Q9H974 415 aaKnown RBP12.96□□□□□ -0.33
SLC46A1-201ENST00000578217 MYO5BQ9ULV0 1848 aa12.96□□□□□ -0.33
SLC46A1-201ENST00000578217 ADGRB3O60242 1522 aa12.96□□□□□ -0.33
SLC46A1-201ENST00000578217 ZFYVE9O95405 1425 aa12.96□□□□□ -0.34
SLC46A1-201ENST00000578217 BCANQ96GW7 911 aa12.95□□□□□ -0.34
SLC46A1-201ENST00000578217 DDX17Q92841 729 aaKnown RBP12.94□□□□□ -0.34
SLC46A1-201ENST00000578217 NOS1P29475 1434 aa12.94□□□□□ -0.34
SLC46A1-201ENST00000578217 KIF15Q9NS87 1388 aa12.94□□□□□ -0.34
SLC46A1-201ENST00000578217 RBM6P78332 1123 aaKnown RBP12.93□□□□□ -0.34
SLC46A1-201ENST00000578217 C8orf37Q96NL8 207 aa12.93□□□□□ -0.34
SLC46A1-201ENST00000578217 RRP7BPQ9NSQ0 103 aa12.93□□□□□ -0.34
SLC46A1-201ENST00000578217 C14orf37Q86TY3 774 aa12.92□□□□□ -0.34
SLC46A1-201ENST00000578217 PLEKHG1Q9ULL1 1385 aa12.92□□□□□ -0.34
SLC46A1-201ENST00000578217 ADAMTS13Q76LX8 1427 aa12.91□□□□□ -0.34
SLC46A1-201ENST00000578217 SETD5Q9C0A6 1442 aa12.9□□□□□ -0.34
SLC46A1-201ENST00000578217 RIMS2Q9UQ26 1411 aa12.9□□□□□ -0.34
SLC46A1-201ENST00000578217 NCOA3Q9Y6Q9 1424 aa12.9□□□□□ -0.34
SLC46A1-201ENST00000578217 LMTK2Q8IWU2 1503 aa12.9□□□□□ -0.34
SLC46A1-201ENST00000578217 ASXL1Q8IXJ9 1541 aa12.9□□□□□ -0.34
SLC46A1-201ENST00000578217 CADPS2Q86UW7 1296 aa12.9□□□□□ -0.34
SLC46A1-201ENST00000578217 C19orf44Q9H6X5 657 aa12.9□□□□□ -0.34
SLC46A1-201ENST00000578217 ZRANB1Q9UGI0 708 aa12.9□□□□□ -0.34
SLC46A1-201ENST00000578217 PTPRUQ92729 1446 aa12.89□□□□□ -0.35
SLC46A1-201ENST00000578217 ERBINQ96RT1 1412 aa12.89□□□□□ -0.35
SLC46A1-201ENST00000578217 ATF3P18847 181 aa12.89□□□□□ -0.35
SLC46A1-201ENST00000578217 PNPLA6Q8IY17 1366 aa12.89□□□□□ -0.35
SLC46A1-201ENST00000578217 ABCC5O15440 1437 aa12.88□□□□□ -0.35
SLC46A1-201ENST00000578217 TBX22Q9Y458 520 aa12.88□□□□□ -0.35
SLC46A1-201ENST00000578217 ATAD2Q6PL18 1390 aa12.88□□□□□ -0.35
SLC46A1-201ENST00000578217 NHSL1Q5SYE7 1610 aa12.88□□□□□ -0.35
SLC46A1-201ENST00000578217 ADAMTS2O95450 1211 aa12.87□□□□□ -0.35
SLC46A1-201ENST00000578217 KANK4Q5T7N3 995 aaPredicted RBP12.87□□□□□ -0.35
SLC46A1-201ENST00000578217 MST1RQ04912 1400 aa12.87□□□□□ -0.35
SLC46A1-201ENST00000578217 CROCC2H7BZ55 1655 aa12.86□□□□□ -0.35
SLC46A1-201ENST00000578217 GCC2Q8IWJ2 1684 aa12.86□□□□□ -0.35
SLC46A1-201ENST00000578217 TMEM131LA2VDJ0 1609 aa12.86□□□□□ -0.35
SLC46A1-201ENST00000578217 PPP1R15AO75807 674 aaPredicted RBP12.85□□□□□ -0.35
SLC46A1-201ENST00000578217 MYOM3Q5VTT5 1437 aa12.85□□□□□ -0.35
SLC46A1-201ENST00000578217 KANK1Q14678 1352 aa12.84□□□□□ -0.35
SLC46A1-201ENST00000578217 SPDYE2BA6NHP3 402 aa12.84□□□□□ -0.35
SLC46A1-201ENST00000578217 SPDYE6P0CI01 402 aa12.84□□□□□ -0.35
SLC46A1-201ENST00000578217 SPDYE2Q495Y8 402 aa12.84□□□□□ -0.35
SLC46A1-201ENST00000578217 NGLY1Q96IV0 654 aa12.84□□□□□ -0.35
SLC46A1-201ENST00000578217 SP7Q8TDD2 431 aaPredicted RBP12.83□□□□□ -0.36
SLC46A1-201ENST00000578217 SLC52A1Q9NWF4 448 aa12.83□□□□□ -0.36
SLC46A1-201ENST00000578217 AMOTL2Q9Y2J4 779 aa12.83□□□□□ -0.36
SLC46A1-201ENST00000578217 LRRC59Q96AG4 307 aaKnown RBP12.82□□□□□ -0.36
SLC46A1-201ENST00000578217 ATRNO75882 1429 aa12.81□□□□□ -0.36
SLC46A1-201ENST00000578217 CHIC2Q9UKJ5 165 aa12.81□□□□□ -0.36
SLC46A1-201ENST00000578217 TRPM2O94759 1503 aa12.8□□□□□ -0.36
SLC46A1-201ENST00000578217 USP21Q9UK80 565 aa12.8□□□□□ -0.36
SLC46A1-201ENST00000578217 DCCP43146 1447 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms