RNA–Protein interactions for RNA: ENST00000578078.1

KRT39-203, Transcript of keratin 39, humanhuman

TSL 1 (best)

Gene KRT39, Length 1,689 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-203ENST00000578078 IGSF3O75054 1194 aa9.39□□□□□ -0.91
KRT39-203ENST00000578078 FAM117AQ9C073 453 aa9.39□□□□□ -0.91
KRT39-203ENST00000578078 TTC37Q6PGP7 1564 aa9.38□□□□□ -0.91
KRT39-203ENST00000578078 SAMD9LQ8IVG5 1584 aa9.38□□□□□ -0.91
KRT39-203ENST00000578078 NCOA1Q15788 1441 aa9.38□□□□□ -0.91
KRT39-203ENST00000578078 GPIHBP1Q8IV16 184 aa9.38□□□□□ -0.91
KRT39-203ENST00000578078 ARIH1Q9Y4X5 557 aaPredicted RBP9.36□□□□□ -0.91
KRT39-203ENST00000578078 ARHGAP5Q13017 1502 aa9.36□□□□□ -0.91
KRT39-203ENST00000578078 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.36□□□□□ -0.91
KRT39-203ENST00000578078 WASHC2AQ641Q2 1341 aa9.36□□□□□ -0.91
KRT39-203ENST00000578078 C9orf84Q5VXU9 1444 aa9.36□□□□□ -0.91
KRT39-203ENST00000578078 DENND4BO75064 1496 aaPredicted RBP9.36□□□□□ -0.91
KRT39-203ENST00000578078 PPP1R15AO75807 674 aaPredicted RBP9.36□□□□□ -0.91
KRT39-203ENST00000578078 MPHOSPH9Q99550 1183 aa9.36□□□□□ -0.91
KRT39-203ENST00000578078 CCDC141Q6ZP82 1450 aa9.35□□□□□ -0.91
KRT39-203ENST00000578078 KDM5BQ9UGL1 1544 aa9.35□□□□□ -0.91
KRT39-203ENST00000578078 PYGBP11216 843 aa9.35□□□□□ -0.91
KRT39-203ENST00000578078 WASHC2CQ9Y4E1 1318 aa9.35□□□□□ -0.91
KRT39-203ENST00000578078 PLEKHH2Q8IVE3 1493 aa9.34□□□□□ -0.91
KRT39-203ENST00000578078 PLEKHG3A1L390 1219 aa9.34□□□□□ -0.91
KRT39-203ENST00000578078 RBM26Q5T8P6 1007 aaKnown RBP9.34□□□□□ -0.91
KRT39-203ENST00000578078 MFRPQ9BY79 579 aa9.34□□□□□ -0.91
KRT39-203ENST00000578078 MAST1Q9Y2H9 1570 aa9.34□□□□□ -0.91
KRT39-203ENST00000578078 TSPY4P0CV99 314 aa9.33□□□□□ -0.92
KRT39-203ENST00000578078 TSPY10P0CW01 314 aa9.33□□□□□ -0.92
KRT39-203ENST00000578078 CLUAP1Q96AJ1 413 aa9.33□□□□□ -0.92
KRT39-203ENST00000578078 DDRGK1Q96HY6 314 aa9.33□□□□□ -0.92
KRT39-203ENST00000578078 MTMR7Q9Y216 660 aa9.33□□□□□ -0.92
KRT39-203ENST00000578078 ANKRD50Q9ULJ7 1429 aa9.33□□□□□ -0.92
KRT39-203ENST00000578078 RSPH4AQ5TD94 716 aa9.32□□□□□ -0.92
KRT39-203ENST00000578078 AEBP1Q8IUX7 1158 aa9.32□□□□□ -0.92
KRT39-203ENST00000578078 RASEFQ8IZ41 740 aa9.32□□□□□ -0.92
KRT39-203ENST00000578078 CCDC136Q96JN2 1154 aa9.32□□□□□ -0.92
KRT39-203ENST00000578078 MBD5Q9P267 1494 aa9.32□□□□□ -0.92
KRT39-203ENST00000578078 SYCP2Q9BX26 1530 aa9.32□□□□□ -0.92
KRT39-203ENST00000578078 PZPP20742 1482 aa9.32□□□□□ -0.92
KRT39-203ENST00000578078 TMCO4Q5TGY1 634 aa9.32□□□□□ -0.92
KRT39-203ENST00000578078 PLXNC1O60486 1568 aa9.31□□□□□ -0.92
KRT39-203ENST00000578078 KDM5DQ9BY66 1539 aa9.31□□□□□ -0.92
KRT39-203ENST00000578078 RPRD2Q5VT52 1461 aaKnown RBP9.31□□□□□ -0.92
KRT39-203ENST00000578078 PPP4R2Q9NY27 417 aa9.31□□□□□ -0.92
KRT39-203ENST00000578078 ANKRD30BQ9BXX2 1392 aa9.3□□□□□ -0.92
KRT39-203ENST00000578078 KIF15Q9NS87 1388 aa9.3□□□□□ -0.92
KRT39-203ENST00000578078 ARAP3Q8WWN8 1544 aa9.3□□□□□ -0.92
KRT39-203ENST00000578078 KIAA1107Q9UPP5 1409 aa9.3□□□□□ -0.92
KRT39-203ENST00000578078 HNRNPMP52272 730 aaKnown RBP eCLIP9.29□□□□□ -0.92
KRT39-203ENST00000578078 MNX1P50219 401 aaPredicted RBP9.29□□□□□ -0.92
KRT39-203ENST00000578078 PLCH2O75038 1416 aa9.28□□□□□ -0.92
KRT39-203ENST00000578078 PPP1R37O75864 691 aa9.28□□□□□ -0.92
KRT39-203ENST00000578078 KCNH8Q96L42 1107 aa9.28□□□□□ -0.92
KRT39-203ENST00000578078 ABCC1P33527 1531 aa9.28□□□□□ -0.92
KRT39-203ENST00000578078 UNC13BO14795 1591 aa9.27□□□□□ -0.92
KRT39-203ENST00000578078 MFAP1P55081 439 aaKnown RBP9.27□□□□□ -0.93
KRT39-203ENST00000578078 IPO9Q96P70 1041 aaKnown RBP9.27□□□□□ -0.93
KRT39-203ENST00000578078 GOPCQ9HD26 462 aa9.27□□□□□ -0.93
KRT39-203ENST00000578078 WDR7Q9Y4E6 1490 aa9.27□□□□□ -0.93
KRT39-203ENST00000578078 TEX14Q8IWB6 1497 aa9.26□□□□□ -0.93
KRT39-203ENST00000578078 ANP32AP39687 249 aaKnown RBP9.26□□□□□ -0.93
KRT39-203ENST00000578078 ABCA9Q8IUA7 1624 aa9.26□□□□□ -0.93
KRT39-203ENST00000578078 NCKAP5LQ9HCH0 1330 aa9.26□□□□□ -0.93
KRT39-203ENST00000578078 EFCAB2Q5VUJ9 269 aa9.26□□□□□ -0.93
KRT39-203ENST00000578078 SERPINA10Q9UK55 444 aa9.26□□□□□ -0.93
KRT39-203ENST00000578078 NUP155O75694 1391 aa9.25□□□□□ -0.93
KRT39-203ENST00000578078 DUOX2Q9NRD8 1548 aa9.25□□□□□ -0.93
KRT39-203ENST00000578078 MLLT3P42568 568 aaPredicted RBP9.25□□□□□ -0.93
KRT39-203ENST00000578078 RBM25P49756 843 aaKnown RBP9.24□□□□□ -0.93
KRT39-203ENST00000578078 MFSD10Q14728 455 aa9.24□□□□□ -0.93
KRT39-203ENST00000578078 L3MBTL2Q969R5 705 aa9.24□□□□□ -0.93
KRT39-203ENST00000578078 FAM135AQ9P2D6 1515 aa9.23□□□□□ -0.93
KRT39-203ENST00000578078 IQGAP3Q86VI3 1631 aa9.23□□□□□ -0.93
KRT39-203ENST00000578078 PPM1GO15355 546 aaPredicted RBP9.23□□□□□ -0.93
KRT39-203ENST00000578078 HMGB1P09429 215 aaKnown RBP9.23□□□□□ -0.93
KRT39-203ENST00000578078 PDAP1Q13442 181 aaKnown RBP9.23□□□□□ -0.93
KRT39-203ENST00000578078 FOXD4L5Q5VV16 416 aaPredicted RBP9.23□□□□□ -0.93
KRT39-203ENST00000578078 ZNF467Q7Z7K2 595 aaPredicted RBP9.23□□□□□ -0.93
KRT39-203ENST00000578078 FOXD4L4Q8WXT5 416 aaPredicted RBP9.23□□□□□ -0.93
KRT39-203ENST00000578078 GZF1Q9H116 711 aaPredicted RBP9.23□□□□□ -0.93
KRT39-203ENST00000578078 POLR1AO95602 1720 aaPredicted RBP9.23□□□□□ -0.93
KRT39-203ENST00000578078 ARHGEF12Q9NZN5 1544 aa9.23□□□□□ -0.93
KRT39-203ENST00000578078 ZNF428Q96B54 188 aa9.23□□□□□ -0.93
KRT39-203ENST00000578078 CCDC97Q96F63 343 aaPredicted RBP9.23□□□□□ -0.93
KRT39-203ENST00000578078 LARP6Q9BRS8 491 aaKnown RBP9.23□□□□□ -0.93
KRT39-203ENST00000578078 ERBINQ96RT1 1412 aa9.22□□□□□ -0.93
KRT39-203ENST00000578078 CFAP74Q9C0B2 1584 aa9.22□□□□□ -0.93
KRT39-203ENST00000578078 FAM43AQ8N2R8 423 aa9.22□□□□□ -0.93
KRT39-203ENST00000578078 RNF39Q9H2S5 420 aa9.22□□□□□ -0.93
KRT39-203ENST00000578078 DDX10Q13206 875 aaKnown RBP9.21□□□□□ -0.93
KRT39-203ENST00000578078 CAMK2BQ13554 666 aa9.21□□□□□ -0.93
KRT39-203ENST00000578078 MCM6Q14566 821 aa9.21□□□□□ -0.93
KRT39-203ENST00000578078 PROSER2Q86WR7 435 aaPredicted RBP9.21□□□□□ -0.93
KRT39-203ENST00000578078 CREBZFQ9NS37 354 aa9.21□□□□□ -0.93
KRT39-203ENST00000578078 FANCAO15360 1455 aa9.21□□□□□ -0.94
KRT39-203ENST00000578078 ANP32CO43423 234 aa9.2□□□□□ -0.94
KRT39-203ENST00000578078 EIF4G2P78344 907 aaKnown RBP eCLIP9.2□□□□□ -0.94
KRT39-203ENST00000578078 RETREG2Q8NC44 543 aa9.2□□□□□ -0.94
KRT39-203ENST00000578078 HIRIP3Q9BW71 556 aaPredicted RBP9.2□□□□□ -0.94
KRT39-203ENST00000578078 ZFYVE16Q7Z3T8 1539 aa9.2□□□□□ -0.94
KRT39-203ENST00000578078 RTEL1-TNFRSF6BF6WH68 1400 aa9.2□□□□□ -0.94
KRT39-203ENST00000578078 ASXL2Q76L83 1435 aa9.2□□□□□ -0.94
KRT39-203ENST00000578078 MAGI2Q86UL8 1455 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms