RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 KIF14Q15058 1648 aa14.06□□□□□ -0.16
PCDHGA4-201ENST00000571252 TPRNQ4KMQ1 711 aa14.06□□□□□ -0.16
PCDHGA4-201ENST00000571252 BCL2L13Q9BXK5 485 aa14.06□□□□□ -0.16
PCDHGA4-201ENST00000571252 KIF3BO15066 747 aa14.06□□□□□ -0.16
PCDHGA4-201ENST00000571252 ARHGAP5Q13017 1502 aa14.06□□□□□ -0.16
PCDHGA4-201ENST00000571252 NFKBIBQ15653 356 aa14.05□□□□□ -0.16
PCDHGA4-201ENST00000571252 GGT6Q6P531 493 aa14.05□□□□□ -0.16
PCDHGA4-201ENST00000571252 SPAG9O60271 1321 aaKnown RBP14.05□□□□□ -0.16
PCDHGA4-201ENST00000571252 KDM5BQ9UGL1 1544 aa14.05□□□□□ -0.16
PCDHGA4-201ENST00000571252 CEP170Q5SW79 1584 aa14.04□□□□□ -0.16
PCDHGA4-201ENST00000571252 STK26Q9P289 416 aa14.04□□□□□ -0.16
PCDHGA4-201ENST00000571252 HDGFP51858 240 aaKnown RBP14.03□□□□□ -0.16
PCDHGA4-201ENST00000571252 AFAP1Q8N556 730 aa14.03□□□□□ -0.16
PCDHGA4-201ENST00000571252 BACH2Q9BYV9 841 aa14.03□□□□□ -0.16
PCDHGA4-201ENST00000571252 ADAMTS8Q9UP79 889 aa14.03□□□□□ -0.16
PCDHGA4-201ENST00000571252 MSNP26038 577 aaKnown RBP14.02□□□□□ -0.16
PCDHGA4-201ENST00000571252 MLECQ14165 292 aa14.02□□□□□ -0.17
PCDHGA4-201ENST00000571252 ITSN2Q9NZM3 1697 aa14.02□□□□□ -0.17
PCDHGA4-201ENST00000571252 NUP160Q12769 1436 aa14□□□□□ -0.17
PCDHGA4-201ENST00000571252 CCDC141Q6ZP82 1450 aa14□□□□□ -0.17
PCDHGA4-201ENST00000571252 TRAK1Q9UPV9 953 aa14□□□□□ -0.17
PCDHGA4-201ENST00000571252 PLCB2Q00722 1185 aa14□□□□□ -0.17
PCDHGA4-201ENST00000571252 SPATA31E1Q6ZUB1 1445 aa14□□□□□ -0.17
PCDHGA4-201ENST00000571252 APBB1O00213 710 aa13.99□□□□□ -0.17
PCDHGA4-201ENST00000571252 CFAP44Q96MT7 982 aa13.99□□□□□ -0.17
PCDHGA4-201ENST00000571252 NGEFQ8N5V2 710 aa13.98□□□□□ -0.17
PCDHGA4-201ENST00000571252 PTMSP20962 102 aa13.98□□□□□ -0.17
PCDHGA4-201ENST00000571252 HDGFL2Q7Z4V5 671 aaPredicted RBP13.98□□□□□ -0.17
PCDHGA4-201ENST00000571252 IL27Q8NEV9 243 aa13.97□□□□□ -0.17
PCDHGA4-201ENST00000571252 DHX29Q7Z478 1369 aaKnown RBP13.97□□□□□ -0.17
PCDHGA4-201ENST00000571252 ZKSCAN2Q63HK3 967 aa13.96□□□□□ -0.17
PCDHGA4-201ENST00000571252 RSPH6AQ9H0K4 717 aa13.96□□□□□ -0.17
PCDHGA4-201ENST00000571252 FOXD4L1Q9NU39 408 aa13.96□□□□□ -0.17
PCDHGA4-201ENST00000571252 ADGRL2O95490 1459 aa13.96□□□□□ -0.18
PCDHGA4-201ENST00000571252 WASHC2CQ9Y4E1 1318 aa13.95□□□□□ -0.18
PCDHGA4-201ENST00000571252 CALD1Q05682 793 aaKnown RBP13.95□□□□□ -0.18
PCDHGA4-201ENST00000571252 PLEKHH2Q8IVE3 1493 aa13.94□□□□□ -0.18
PCDHGA4-201ENST00000571252 PANK1Q8TE04 598 aa13.94□□□□□ -0.18
PCDHGA4-201ENST00000571252 BRPF3Q9ULD4 1205 aa13.93□□□□□ -0.18
PCDHGA4-201ENST00000571252 DDX11L8A8MPP1 907 aa13.93□□□□□ -0.18
PCDHGA4-201ENST00000571252 RALGAPBQ86X10 1494 aa13.93□□□□□ -0.18
PCDHGA4-201ENST00000571252 FRAT2O75474 233 aaPredicted RBP13.92□□□□□ -0.18
PCDHGA4-201ENST00000571252 MCCP23508 829 aa13.92□□□□□ -0.18
PCDHGA4-201ENST00000571252 PPP2R1AP30153 589 aa13.92□□□□□ -0.18
PCDHGA4-201ENST00000571252 TERF2IPQ9NYB0 399 aa13.92□□□□□ -0.18
PCDHGA4-201ENST00000571252 NUTM2DQ5VT03 806 aaPredicted RBP13.92□□□□□ -0.18
PCDHGA4-201ENST00000571252 SOX12O15370 315 aa13.91□□□□□ -0.18
PCDHGA4-201ENST00000571252 SYCP2Q9BX26 1530 aa13.91□□□□□ -0.18
PCDHGA4-201ENST00000571252 ABCC10Q5T3U5 1492 aa13.9□□□□□ -0.18
PCDHGA4-201ENST00000571252 CHMP5Q9NZZ3 219 aa13.9□□□□□ -0.18
PCDHGA4-201ENST00000571252 CYB5RLQ6IPT4 315 aa13.9□□□□□ -0.19
PCDHGA4-201ENST00000571252 DZIP1LQ8IYY4 767 aaKnown RBP13.9□□□□□ -0.19
PCDHGA4-201ENST00000571252 FAM135AQ9P2D6 1515 aa13.89□□□□□ -0.19
PCDHGA4-201ENST00000571252 SHANK2Q9UPX8 1470 aa13.89□□□□□ -0.19
PCDHGA4-201ENST00000571252 RUNDC1Q96C34 613 aa13.89□□□□□ -0.19
PCDHGA4-201ENST00000571252 OS9Q13438 667 aaPredicted RBP13.88□□□□□ -0.19
PCDHGA4-201ENST00000571252 ANKRD45Q5TZF3 282 aa13.88□□□□□ -0.19
PCDHGA4-201ENST00000571252 ADGBQ8N7X0 1667 aa13.88□□□□□ -0.19
PCDHGA4-201ENST00000571252 KCNJ4P48050 445 aa13.88□□□□□ -0.19
PCDHGA4-201ENST00000571252 DISP3Q9P2K9 1392 aa13.88□□□□□ -0.19
PCDHGA4-201ENST00000571252 ELL2O00472 640 aaPredicted RBP13.87□□□□□ -0.19
PCDHGA4-201ENST00000571252 ANO8Q9HCE9 1232 aaPredicted RBP13.87□□□□□ -0.19
PCDHGA4-201ENST00000571252 DDX19BQ9UMR2 479 aa13.87□□□□□ -0.19
PCDHGA4-201ENST00000571252 ERBINQ96RT1 1412 aa13.87□□□□□ -0.19
PCDHGA4-201ENST00000571252 STAC3Q96MF2 364 aa13.87□□□□□ -0.19
PCDHGA4-201ENST00000571252 BCAR3O75815 825 aa13.87□□□□□ -0.19
PCDHGA4-201ENST00000571252 ABCA8O94911 1581 aa13.86□□□□□ -0.19
PCDHGA4-201ENST00000571252 UHRF1BP1Q6BDS2 1440 aa13.86□□□□□ -0.19
PCDHGA4-201ENST00000571252 CFAP70Q5T0N1 1121 aa13.86□□□□□ -0.19
PCDHGA4-201ENST00000571252 DDX49Q9Y6V7 483 aaKnown RBP13.86□□□□□ -0.19
PCDHGA4-201ENST00000571252 PRAG1Q86YV5 1406 aa13.86□□□□□ -0.19
PCDHGA4-201ENST00000571252 MBD5Q9P267 1494 aa13.86□□□□□ -0.19
PCDHGA4-201ENST00000571252 RTF1Q92541 710 aaKnown RBP13.86□□□□□ -0.19
PCDHGA4-201ENST00000571252 SKAP1Q86WV1 359 aa13.85□□□□□ -0.19
PCDHGA4-201ENST00000571252 C22orf23Q9BZE7 217 aa13.85□□□□□ -0.19
PCDHGA4-201ENST00000571252 ZRSR1Q15695 479 aaKnown RBP13.85□□□□□ -0.19
PCDHGA4-201ENST00000571252 NPHP1O15259 732 aa13.85□□□□□ -0.19
PCDHGA4-201ENST00000571252 AAMPQ13685 434 aa13.85□□□□□ -0.19
PCDHGA4-201ENST00000571252 PDE3AQ14432 1141 aa13.85□□□□□ -0.19
PCDHGA4-201ENST00000571252 HSP90AA2PQ14568 343 aaPredicted RBP13.84□□□□□ -0.19
PCDHGA4-201ENST00000571252 GOLGA6L4A6NEF3 574 aa13.84□□□□□ -0.19
PCDHGA4-201ENST00000571252 SKOR2Q2VWA4 1001 aaPredicted RBP13.84□□□□□ -0.19
PCDHGA4-201ENST00000571252 TCP11L2Q8N4U5 519 aa13.84□□□□□ -0.19
PCDHGA4-201ENST00000571252 EVC2Q86UK5 1308 aa13.84□□□□□ -0.19
PCDHGA4-201ENST00000571252 ARHGEF12Q9NZN5 1544 aa13.83□□□□□ -0.19
PCDHGA4-201ENST00000571252 SCAPERQ9BY12 1400 aa13.83□□□□□ -0.2
PCDHGA4-201ENST00000571252 TESK2Q96S53 571 aa13.83□□□□□ -0.2
PCDHGA4-201ENST00000571252 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.83□□□□□ -0.2
PCDHGA4-201ENST00000571252 ST18O60284 1047 aa13.82□□□□□ -0.2
PCDHGA4-201ENST00000571252 CHAF1AQ13111 956 aaPredicted RBP13.82□□□□□ -0.2
PCDHGA4-201ENST00000571252 LNPKQ9C0E8 428 aa13.82□□□□□ -0.2
PCDHGA4-201ENST00000571252 HMMRO75330 724 aa13.82□□□□□ -0.2
PCDHGA4-201ENST00000571252 KIAA2012Q0VF49 1180 aa13.82□□□□□ -0.2
PCDHGA4-201ENST00000571252 CDC42BPAQ5VT25 1732 aa13.82□□□□□ -0.2
PCDHGA4-201ENST00000571252 SYAP1Q96A49 352 aaPredicted RBP13.82□□□□□ -0.2
PCDHGA4-201ENST00000571252 FGD1P98174 961 aa13.81□□□□□ -0.2
PCDHGA4-201ENST00000571252 LMOD3Q0VAK6 560 aa13.81□□□□□ -0.2
PCDHGA4-201ENST00000571252 C20orf194Q5TEA3 1177 aa13.81□□□□□ -0.2
PCDHGA4-201ENST00000571252 ARID3AQ99856 593 aa13.81□□□□□ -0.2
PCDHGA4-201ENST00000571252 PDZRN3Q9UPQ7 1066 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms