RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 CENPQQ7L2Z9 268 aaPredicted RBP11.62□□□□□ -0.55
HDGFL3-206ENST00000568294 FAM161AQ3B820 660 aa11.61□□□□□ -0.55
HDGFL3-206ENST00000568294 IGHDP01880 384 aa11.61□□□□□ -0.55
HDGFL3-206ENST00000568294 KCNA4P22459 653 aa11.61□□□□□ -0.55
HDGFL3-206ENST00000568294 COL17A1Q9UMD9 1497 aaPredicted RBP11.6□□□□□ -0.55
HDGFL3-206ENST00000568294 MORC1Q86VD1 984 aa11.6□□□□□ -0.55
HDGFL3-206ENST00000568294 CDC42BPAQ5VT25 1732 aa11.6□□□□□ -0.55
HDGFL3-206ENST00000568294 ARHGEF12Q9NZN5 1544 aa11.6□□□□□ -0.55
HDGFL3-206ENST00000568294 SLC12A5Q9H2X9 1139 aa11.6□□□□□ -0.55
HDGFL3-206ENST00000568294 MAGI2Q86UL8 1455 aa11.6□□□□□ -0.55
HDGFL3-206ENST00000568294 KDM5DQ9BY66 1539 aa11.59□□□□□ -0.55
HDGFL3-206ENST00000568294 STK26Q9P289 416 aa11.59□□□□□ -0.55
HDGFL3-206ENST00000568294 RSPH4AQ5TD94 716 aa11.59□□□□□ -0.55
HDGFL3-206ENST00000568294 ADGRF5Q8IZF2 1346 aa11.59□□□□□ -0.55
HDGFL3-206ENST00000568294 SLFN5Q08AF3 891 aa11.59□□□□□ -0.55
HDGFL3-206ENST00000568294 U2SURPO15042 1029 aaKnown RBP11.58□□□□□ -0.56
HDGFL3-206ENST00000568294 SEC24BO95487 1268 aa11.58□□□□□ -0.56
HDGFL3-206ENST00000568294 C8orf34Q49A92 452 aa11.58□□□□□ -0.56
HDGFL3-206ENST00000568294 CDCA8Q53HL2 280 aa11.58□□□□□ -0.56
HDGFL3-206ENST00000568294 SAMD9LQ8IVG5 1584 aa11.58□□□□□ -0.56
HDGFL3-206ENST00000568294 CENPJQ9HC77 1338 aaPredicted RBP11.58□□□□□ -0.56
HDGFL3-206ENST00000568294 NUP160Q12769 1436 aa11.57□□□□□ -0.56
HDGFL3-206ENST00000568294 TRAPPC8Q9Y2L5 1435 aa11.57□□□□□ -0.56
HDGFL3-206ENST00000568294 GSE1Q14687 1217 aa11.57□□□□□ -0.56
HDGFL3-206ENST00000568294 CARD14Q9BXL6 1004 aa11.57□□□□□ -0.56
HDGFL3-206ENST00000568294 POLR1AO95602 1720 aaPredicted RBP11.56□□□□□ -0.56
HDGFL3-206ENST00000568294 U2AF1L5P0DN76 240 aaPredicted RBP11.56□□□□□ -0.56
HDGFL3-206ENST00000568294 U2AF1Q01081 240 aaKnown RBP eCLIP11.56□□□□□ -0.56
HDGFL3-206ENST00000568294 SHANK2Q9UPX8 1470 aa11.56□□□□□ -0.56
HDGFL3-206ENST00000568294 CROCC2H7BZ55 1655 aa11.56□□□□□ -0.56
HDGFL3-206ENST00000568294 GZF1Q9H116 711 aaPredicted RBP11.56□□□□□ -0.56
HDGFL3-206ENST00000568294 ABCA8O94911 1581 aa11.55□□□□□ -0.56
HDGFL3-206ENST00000568294 KDM2BQ8NHM5 1336 aa11.55□□□□□ -0.56
HDGFL3-206ENST00000568294 BLMP54132 1417 aaPredicted RBP11.54□□□□□ -0.56
HDGFL3-206ENST00000568294 TSR2Q969E8 191 aaKnown RBP11.54□□□□□ -0.56
HDGFL3-206ENST00000568294 E9PSI1 815 aa11.53□□□□□ -0.56
HDGFL3-206ENST00000568294 NCBP3Q53F19 620 aaKnown RBP11.53□□□□□ -0.56
HDGFL3-206ENST00000568294 TCP11L2Q8N4U5 519 aa11.53□□□□□ -0.56
HDGFL3-206ENST00000568294 TTC37Q6PGP7 1564 aa11.53□□□□□ -0.56
HDGFL3-206ENST00000568294 SCAPERQ9BY12 1400 aa11.53□□□□□ -0.56
HDGFL3-206ENST00000568294 MTHFSP49914 203 aa11.53□□□□□ -0.56
HDGFL3-206ENST00000568294 WASHC2CQ9Y4E1 1318 aa11.52□□□□□ -0.56
HDGFL3-206ENST00000568294 FTSJ3Q8IY81 847 aaKnown RBP11.52□□□□□ -0.56
HDGFL3-206ENST00000568294 ERCC6L2Q5T890 1561 aa11.52□□□□□ -0.57
HDGFL3-206ENST00000568294 RLBP1P12271 317 aa11.52□□□□□ -0.57
HDGFL3-206ENST00000568294 WWC1Q8IX03 1113 aa11.52□□□□□ -0.57
HDGFL3-206ENST00000568294 CABP2Q9NPB3 220 aa11.51□□□□□ -0.57
HDGFL3-206ENST00000568294 GPRASP1Q5JY77 1395 aa11.51□□□□□ -0.57
HDGFL3-206ENST00000568294 MFAP1P55081 439 aaKnown RBP11.51□□□□□ -0.57
HDGFL3-206ENST00000568294 TRPM1Q7Z4N2 1603 aa11.51□□□□□ -0.57
HDGFL3-206ENST00000568294 POGKQ9P215 609 aa11.51□□□□□ -0.57
HDGFL3-206ENST00000568294 ZMYM4Q5VZL5 1548 aa11.5□□□□□ -0.57
HDGFL3-206ENST00000568294 WDR7Q9Y4E6 1490 aa11.5□□□□□ -0.57
HDGFL3-206ENST00000568294 UGGT1Q9NYU2 1555 aa11.5□□□□□ -0.57
HDGFL3-206ENST00000568294 FBLN1P23142 703 aa11.5□□□□□ -0.57
HDGFL3-206ENST00000568294 GGNBP2Q9H3C7 697 aa11.5□□□□□ -0.57
HDGFL3-206ENST00000568294 KANK1Q14678 1352 aa11.49□□□□□ -0.57
HDGFL3-206ENST00000568294 SRPK2P78362 688 aaKnown RBP11.49□□□□□ -0.57
HDGFL3-206ENST00000568294 USP35Q9P2H5 1018 aa11.49□□□□□ -0.57
HDGFL3-206ENST00000568294 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.49□□□□□ -0.57
HDGFL3-206ENST00000568294 ADCY10Q96PN6 1610 aa11.49□□□□□ -0.57
HDGFL3-206ENST00000568294 ITPRIPQ8IWB1 547 aa11.49□□□□□ -0.57
HDGFL3-206ENST00000568294 FOXD4L1Q9NU39 408 aa11.49□□□□□ -0.57
HDGFL3-206ENST00000568294 PCDHB15Q9Y5E8 787 aa11.49□□□□□ -0.57
HDGFL3-206ENST00000568294 EIF3AQ14152 1382 aaKnown RBP11.49□□□□□ -0.57
HDGFL3-206ENST00000568294 UPF2Q9HAU5 1272 aaKnown RBP11.48□□□□□ -0.57
HDGFL3-206ENST00000568294 NSD3Q9BZ95 1437 aa11.48□□□□□ -0.57
HDGFL3-206ENST00000568294 ELL2O00472 640 aaPredicted RBP11.48□□□□□ -0.57
HDGFL3-206ENST00000568294 PDZRN3Q9UPQ7 1066 aa11.48□□□□□ -0.57
HDGFL3-206ENST00000568294 SMC4Q9NTJ3 1288 aa11.47□□□□□ -0.57
HDGFL3-206ENST00000568294 ZNF521Q96K83 1311 aa11.47□□□□□ -0.57
HDGFL3-206ENST00000568294 CDC42BPBQ9Y5S2 1711 aa11.47□□□□□ -0.57
HDGFL3-206ENST00000568294 NKTRP30414 1462 aaKnown RBP11.47□□□□□ -0.57
HDGFL3-206ENST00000568294 SCAF11Q99590 1463 aaKnown RBP11.47□□□□□ -0.57
HDGFL3-206ENST00000568294 PRDM15P57071 1507 aaPredicted RBP11.47□□□□□ -0.57
HDGFL3-206ENST00000568294 CFAP53Q96M91 514 aa11.46□□□□□ -0.58
HDGFL3-206ENST00000568294 MINK1Q8N4C8 1332 aaPredicted RBP11.45□□□□□ -0.58
HDGFL3-206ENST00000568294 RARSP54136 660 aaKnown RBP11.45□□□□□ -0.58
HDGFL3-206ENST00000568294 ASXL1Q8IXJ9 1541 aa11.45□□□□□ -0.58
HDGFL3-206ENST00000568294 CGNL1Q0VF96 1302 aa11.45□□□□□ -0.58
HDGFL3-206ENST00000568294 BECN1Q14457 450 aa11.45□□□□□ -0.58
HDGFL3-206ENST00000568294 E9PCH4 1651 aa11.45□□□□□ -0.58
HDGFL3-206ENST00000568294 ARHGEF5Q12774 1597 aa11.44□□□□□ -0.58
HDGFL3-206ENST00000568294 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.44□□□□□ -0.58
HDGFL3-206ENST00000568294 RUNDC1Q96C34 613 aa11.44□□□□□ -0.58
HDGFL3-206ENST00000568294 EXOSC9Q06265 439 aaKnown RBP11.43□□□□□ -0.58
HDGFL3-206ENST00000568294 C1orf115Q9H7X2 142 aa11.43□□□□□ -0.58
HDGFL3-206ENST00000568294 NOS1P29475 1434 aa11.43□□□□□ -0.58
HDGFL3-206ENST00000568294 DUOX2Q9NRD8 1548 aa11.42□□□□□ -0.58
HDGFL3-206ENST00000568294 PREX2Q70Z35 1606 aa11.42□□□□□ -0.58
HDGFL3-206ENST00000568294 MAPK8IP3Q9UPT6 1336 aa11.42□□□□□ -0.58
HDGFL3-206ENST00000568294 THUMPD2Q9BTF0 503 aaKnown RBP11.42□□□□□ -0.58
HDGFL3-206ENST00000568294 ATP10AO60312 1499 aa11.42□□□□□ -0.58
HDGFL3-206ENST00000568294 PLCH2O75038 1416 aa11.41□□□□□ -0.58
HDGFL3-206ENST00000568294 MAST1Q9Y2H9 1570 aa11.41□□□□□ -0.58
HDGFL3-206ENST00000568294 APBB1O00213 710 aa11.41□□□□□ -0.58
HDGFL3-206ENST00000568294 SOX12O15370 315 aa11.41□□□□□ -0.58
HDGFL3-206ENST00000568294 LNPKQ9C0E8 428 aa11.41□□□□□ -0.58
HDGFL3-206ENST00000568294 RAPGEF3O95398 923 aa11.41□□□□□ -0.58
HDGFL3-206ENST00000568294 STAG3Q9UJ98 1225 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms