RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 NEO1Q92859 1461 aa8.8□□□□□ -1
CHD9-217ENST00000565832 C11orf95C9JLR9 678 aaPredicted RBP8.8□□□□□ -1
CHD9-217ENST00000565832 BCANQ96GW7 911 aa8.8□□□□□ -1
CHD9-217ENST00000565832 IQGAP3Q86VI3 1631 aa8.8□□□□□ -1
CHD9-217ENST00000565832 YEATS2Q9ULM3 1422 aa8.8□□□□□ -1
CHD9-217ENST00000565832 A2MP01023 1474 aa8.79□□□□□ -1
CHD9-217ENST00000565832 MAGI2Q86UL8 1455 aa8.79□□□□□ -1
CHD9-217ENST00000565832 CCDC144AA2RUR9 1427 aa8.79□□□□□ -1
CHD9-217ENST00000565832 GLI2P10070 1586 aa8.79□□□□□ -1
CHD9-217ENST00000565832 KDM5CP41229 1560 aa8.79□□□□□ -1
CHD9-217ENST00000565832 MLH3Q9UHC1 1453 aa8.79□□□□□ -1
CHD9-217ENST00000565832 COL17A1Q9UMD9 1497 aaPredicted RBP8.78□□□□□ -1
CHD9-217ENST00000565832 EIF4G2P78344 907 aaKnown RBP eCLIP8.78□□□□□ -1
CHD9-217ENST00000565832 FRMPD1Q5SYB0 1578 aa8.77□□□□□ -1
CHD9-217ENST00000565832 CFAP74Q9C0B2 1584 aa8.77□□□□□ -1
CHD9-217ENST00000565832 E9PCH4 1651 aa8.77□□□□□ -1.01
CHD9-217ENST00000565832 PPRC1Q5VV67 1664 aaKnown RBP8.77□□□□□ -1.01
CHD9-217ENST00000565832 ABCA6Q8N139 1617 aa8.77□□□□□ -1.01
CHD9-217ENST00000565832 WASHC2CQ9Y4E1 1318 aa8.77□□□□□ -1.01
CHD9-217ENST00000565832 RICTORQ6R327 1708 aa8.77□□□□□ -1.01
CHD9-217ENST00000565832 HECW2Q9P2P5 1572 aa8.76□□□□□ -1.01
CHD9-217ENST00000565832 KIF13AQ9H1H9 1805 aa8.76□□□□□ -1.01
CHD9-217ENST00000565832 NKX1-1Q15270 411 aaPredicted RBP8.76□□□□□ -1.01
CHD9-217ENST00000565832 NBPF1Q3BBV0 1214 aa8.76□□□□□ -1.01
CHD9-217ENST00000565832 KANK1Q14678 1352 aa8.76□□□□□ -1.01
CHD9-217ENST00000565832 MROH1Q8NDA8 1641 aa8.76□□□□□ -1.01
CHD9-217ENST00000565832 CHRM1P11229 460 aaPredicted RBP8.76□□□□□ -1.01
CHD9-217ENST00000565832 YTHDC1Q96MU7 727 aaKnown RBP8.76□□□□□ -1.01
CHD9-217ENST00000565832 DNAJC5Q9H3Z4 198 aa8.76□□□□□ -1.01
CHD9-217ENST00000565832 TAOK2Q9UL54 1235 aa8.76□□□□□ -1.01
CHD9-217ENST00000565832 DEPDC5O75140 1603 aa8.76□□□□□ -1.01
CHD9-217ENST00000565832 WASHC2AQ641Q2 1341 aa8.75□□□□□ -1.01
CHD9-217ENST00000565832 PYGBP11216 843 aa8.75□□□□□ -1.01
CHD9-217ENST00000565832 CHADLQ6NUI6 762 aa8.75□□□□□ -1.01
CHD9-217ENST00000565832 STK25O00506 426 aa8.75□□□□□ -1.01
CHD9-217ENST00000565832 ATP10AO60312 1499 aa8.75□□□□□ -1.01
CHD9-217ENST00000565832 UGGT1Q9NYU2 1555 aa8.74□□□□□ -1.01
CHD9-217ENST00000565832 VGFO15240 615 aaPredicted RBP8.74□□□□□ -1.01
CHD9-217ENST00000565832 MLECQ14165 292 aa8.74□□□□□ -1.01
CHD9-217ENST00000565832 CARD11Q9BXL7 1154 aa8.74□□□□□ -1.01
CHD9-217ENST00000565832 VWDEQ8N2E2 1590 aa8.74□□□□□ -1.01
CHD9-217ENST00000565832 DIP2CQ9Y2E4 1556 aa8.73□□□□□ -1.01
CHD9-217ENST00000565832 CEP152O94986 1710 aa8.73□□□□□ -1.01
CHD9-217ENST00000565832 PRDM15P57071 1507 aaPredicted RBP8.72□□□□□ -1.01
CHD9-217ENST00000565832 PTPRTO14522 1441 aa8.72□□□□□ -1.01
CHD9-217ENST00000565832 SPATA31E1Q6ZUB1 1445 aa8.72□□□□□ -1.01
CHD9-217ENST00000565832 EIF2AK4Q9P2K8 1649 aaKnown RBP8.72□□□□□ -1.01
CHD9-217ENST00000565832 ST20-MTHFSA0A0A6YYL1 179 aa8.72□□□□□ -1.01
CHD9-217ENST00000565832 POLR3GLQ9BT43 218 aa8.72□□□□□ -1.01
CHD9-217ENST00000565832 TET3O43151 1660 aa8.71□□□□□ -1.01
CHD9-217ENST00000565832 UHRF1BP1Q6BDS2 1440 aa8.71□□□□□ -1.01
CHD9-217ENST00000565832 FBXO31Q5XUX0 539 aaPredicted RBP8.71□□□□□ -1.01
CHD9-217ENST00000565832 USP47Q96K76 1375 aa8.71□□□□□ -1.02
CHD9-217ENST00000565832 CLTCL1P53675 1640 aa8.71□□□□□ -1.02
CHD9-217ENST00000565832 NPATQ14207 1427 aa8.71□□□□□ -1.02
CHD9-217ENST00000565832 NUTM2DQ5VT03 806 aaPredicted RBP8.71□□□□□ -1.02
CHD9-217ENST00000565832 SPHKAPQ2M3C7 1700 aa8.7□□□□□ -1.02
CHD9-217ENST00000565832 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.7□□□□□ -1.02
CHD9-217ENST00000565832 ZFP91Q96JP5 570 aaPredicted RBP8.7□□□□□ -1.02
CHD9-217ENST00000565832 ROCK2O75116 1388 aaKnown RBP8.7□□□□□ -1.02
CHD9-217ENST00000565832 PRAG1Q86YV5 1406 aa8.7□□□□□ -1.02
CHD9-217ENST00000565832 GTPBP6O43824 516 aaPredicted RBP8.69□□□□□ -1.02
CHD9-217ENST00000565832 CNGB1Q14028 1251 aaPredicted RBP8.69□□□□□ -1.02
CHD9-217ENST00000565832 RNF17Q9BXT8 1623 aaKnown RBP8.69□□□□□ -1.02
CHD9-217ENST00000565832 KIF7Q2M1P5 1343 aa8.69□□□□□ -1.02
CHD9-217ENST00000565832 TRPM2O94759 1503 aa8.69□□□□□ -1.02
CHD9-217ENST00000565832 EFCAB6Q5THR3 1501 aa8.69□□□□□ -1.02
CHD9-217ENST00000565832 BCL11BQ9C0K0 894 aaPredicted RBP8.69□□□□□ -1.02
CHD9-217ENST00000565832 SIGLEC1Q9BZZ2 1709 aa8.69□□□□□ -1.02
CHD9-217ENST00000565832 TSPYL2Q9H2G4 693 aaPredicted RBP8.68□□□□□ -1.02
CHD9-217ENST00000565832 FARP1Q9Y4F1 1045 aaPredicted RBP8.68□□□□□ -1.02
CHD9-217ENST00000565832 ADGRF5Q8IZF2 1346 aa8.68□□□□□ -1.02
CHD9-217ENST00000565832 ABCC3O15438 1527 aa8.68□□□□□ -1.02
CHD9-217ENST00000565832 IDI1Q13907 227 aa8.68□□□□□ -1.02
CHD9-217ENST00000565832 STK24Q9Y6E0 443 aa8.68□□□□□ -1.02
CHD9-217ENST00000565832 CCDC7Q96M83 1385 aa8.68□□□□□ -1.02
CHD9-217ENST00000565832 BCORL1Q5H9F3 1711 aa8.67□□□□□ -1.02
CHD9-217ENST00000565832 RALGAPBQ86X10 1494 aa8.67□□□□□ -1.02
CHD9-217ENST00000565832 SGIP1Q9BQI5 828 aa8.67□□□□□ -1.02
CHD9-217ENST00000565832 LMTK2Q8IWU2 1503 aa8.67□□□□□ -1.02
CHD9-217ENST00000565832 PRKCSHP14314 528 aaPredicted RBP8.66□□□□□ -1.02
CHD9-217ENST00000565832 CFAP70Q5T0N1 1121 aa8.66□□□□□ -1.02
CHD9-217ENST00000565832 ZMYM4Q5VZL5 1548 aa8.66□□□□□ -1.02
CHD9-217ENST00000565832 ARID4BQ4LE39 1312 aaPredicted RBP8.66□□□□□ -1.02
CHD9-217ENST00000565832 TRPM1Q7Z4N2 1603 aa8.65□□□□□ -1.03
CHD9-217ENST00000565832 ANP32CO43423 234 aa8.65□□□□□ -1.03
CHD9-217ENST00000565832 PRKAR2AP13861 404 aaKnown RBP8.64□□□□□ -1.03
CHD9-217ENST00000565832 CAMSAP1Q5T5Y3 1602 aa8.64□□□□□ -1.03
CHD9-217ENST00000565832 KIF1BO60333 1816 aa8.63□□□□□ -1.03
CHD9-217ENST00000565832 MROH2AA6NES4 1674 aa8.63□□□□□ -1.03
CHD9-217ENST00000565832 TMEM132EQ6IEE7 984 aa8.63□□□□□ -1.03
CHD9-217ENST00000565832 TESK2Q96S53 571 aa8.63□□□□□ -1.03
CHD9-217ENST00000565832 NOS1P29475 1434 aa8.62□□□□□ -1.03
CHD9-217ENST00000565832 SYNMO15061 1565 aa8.62□□□□□ -1.03
CHD9-217ENST00000565832 CCDC184Q52MB2 194 aa8.62□□□□□ -1.03
CHD9-217ENST00000565832 CNTLNQ9NXG0 1405 aa8.61□□□□□ -1.03
CHD9-217ENST00000565832 CEBPAP49715 358 aaPredicted RBP8.61□□□□□ -1.03
CHD9-217ENST00000565832 GPRASP1Q5JY77 1395 aa8.61□□□□□ -1.03
CHD9-217ENST00000565832 MADDQ8WXG6 1647 aa8.61□□□□□ -1.03
CHD9-217ENST00000565832 ARHGAP31Q2M1Z3 1444 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms