RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 CFAP65Q6ZU64 1925 aaKnown RBP9.66□□□□□ -0.86
TCF4-228ENST00000565393 TMEM94Q12767 1356 aa9.66□□□□□ -0.86
TCF4-228ENST00000565393 UBR1Q8IWV7 1749 aa9.66□□□□□ -0.86
TCF4-228ENST00000565393 PIK3C2BO00750 1634 aa9.66□□□□□ -0.86
TCF4-228ENST00000565393 RIMS2Q9UQ26 1411 aa9.65□□□□□ -0.86
TCF4-228ENST00000565393 SLAIN2Q9P270 581 aa9.65□□□□□ -0.86
TCF4-228ENST00000565393 PLEKHG1Q9ULL1 1385 aa9.63□□□□□ -0.87
TCF4-228ENST00000565393 SYNMO15061 1565 aa9.63□□□□□ -0.87
TCF4-228ENST00000565393 AMOTL2Q9Y2J4 779 aa9.63□□□□□ -0.87
TCF4-228ENST00000565393 MSH6P52701 1360 aa9.63□□□□□ -0.87
TCF4-228ENST00000565393 SLC4A1APQ9BWU0 796 aaKnown RBP9.62□□□□□ -0.87
TCF4-228ENST00000565393 ATF3P18847 181 aa9.61□□□□□ -0.87
TCF4-228ENST00000565393 C19orf44Q9H6X5 657 aa9.61□□□□□ -0.87
TCF4-228ENST00000565393 ADGRB3O60242 1522 aa9.61□□□□□ -0.87
TCF4-228ENST00000565393 ZFYVE9O95405 1425 aa9.6□□□□□ -0.87
TCF4-228ENST00000565393 TET3O43151 1660 aa9.6□□□□□ -0.87
TCF4-228ENST00000565393 FAM135BQ49AJ0 1406 aa9.59□□□□□ -0.87
TCF4-228ENST00000565393 RRBP1Q9P2E9 1410 aaKnown RBP9.59□□□□□ -0.87
TCF4-228ENST00000565393 CADPS2Q86UW7 1296 aa9.59□□□□□ -0.87
TCF4-228ENST00000565393 VGFO15240 615 aaPredicted RBP9.58□□□□□ -0.88
TCF4-228ENST00000565393 FOXD1Q16676 465 aa9.58□□□□□ -0.88
TCF4-228ENST00000565393 UNC13BO14795 1591 aa9.58□□□□□ -0.88
TCF4-228ENST00000565393 STRCP1A6NGW2 1772 aa9.58□□□□□ -0.88
TCF4-228ENST00000565393 NAIPQ13075 1403 aa9.57□□□□□ -0.88
TCF4-228ENST00000565393 ALKQ9UM73 1620 aa9.56□□□□□ -0.88
TCF4-228ENST00000565393 KDM5AP29375 1690 aaKnown RBP9.56□□□□□ -0.88
TCF4-228ENST00000565393 RGL3Q3MIN7 710 aa9.56□□□□□ -0.88
TCF4-228ENST00000565393 TMEM131LA2VDJ0 1609 aa9.56□□□□□ -0.88
TCF4-228ENST00000565393 ADAMTS13Q76LX8 1427 aa9.56□□□□□ -0.88
TCF4-228ENST00000565393 PIK3R4Q99570 1358 aa9.55□□□□□ -0.88
TCF4-228ENST00000565393 IQGAP3Q86VI3 1631 aa9.55□□□□□ -0.88
TCF4-228ENST00000565393 E9PCH4 1651 aa9.55□□□□□ -0.88
TCF4-228ENST00000565393 NKTRP30414 1462 aaKnown RBP9.54□□□□□ -0.88
TCF4-228ENST00000565393 MPHOSPH9Q99550 1183 aa9.54□□□□□ -0.88
TCF4-228ENST00000565393 NCOA3Q9Y6Q9 1424 aa9.54□□□□□ -0.88
TCF4-228ENST00000565393 GCC2Q8IWJ2 1684 aa9.54□□□□□ -0.88
TCF4-228ENST00000565393 RPGRIP1LQ68CZ1 1315 aa9.54□□□□□ -0.88
TCF4-228ENST00000565393 METP08581 1390 aa9.53□□□□□ -0.88
TCF4-228ENST00000565393 MEX3CQ5U5Q3 659 aaKnown RBP9.53□□□□□ -0.88
TCF4-228ENST00000565393 RGS17Q9UGC6 210 aaPredicted RBP9.53□□□□□ -0.88
TCF4-228ENST00000565393 HFM1A2PYH4 1435 aa9.53□□□□□ -0.88
TCF4-228ENST00000565393 MED1Q15648 1581 aaPredicted RBP9.53□□□□□ -0.88
TCF4-228ENST00000565393 NUTM2BA6NNL0 878 aaPredicted RBP9.52□□□□□ -0.89
TCF4-228ENST00000565393 NUTM2EB1AL46 878 aaPredicted RBP9.52□□□□□ -0.89
TCF4-228ENST00000565393 NUTM2AQ8IVF1 878 aaPredicted RBP9.52□□□□□ -0.89
TCF4-228ENST00000565393 PTPRUQ92729 1446 aa9.52□□□□□ -0.89
TCF4-228ENST00000565393 BRINP3Q76B58 766 aa9.51□□□□□ -0.89
TCF4-228ENST00000565393 POTEAQ6S8J7 498 aa9.5□□□□□ -0.89
TCF4-228ENST00000565393 STK26Q9P289 416 aa9.5□□□□□ -0.89
TCF4-228ENST00000565393 JCADQ9P266 1359 aa9.5□□□□□ -0.89
TCF4-228ENST00000565393 LRRC59Q96AG4 307 aaKnown RBP9.49□□□□□ -0.89
TCF4-228ENST00000565393 TRPM2O94759 1503 aa9.49□□□□□ -0.89
TCF4-228ENST00000565393 ACIN1Q9UKV3 1341 aaKnown RBP9.49□□□□□ -0.89
TCF4-228ENST00000565393 DDX17Q92841 729 aaKnown RBP9.48□□□□□ -0.89
TCF4-228ENST00000565393 NWD1Q149M9 1564 aa9.48□□□□□ -0.89
TCF4-228ENST00000565393 TMEM132EQ6IEE7 984 aa9.47□□□□□ -0.89
TCF4-228ENST00000565393 ORAI2Q96SN7 254 aa9.47□□□□□ -0.89
TCF4-228ENST00000565393 SPATA31A6Q5VVP1 1343 aa9.47□□□□□ -0.89
TCF4-228ENST00000565393 ADGRF5Q8IZF2 1346 aa9.47□□□□□ -0.89
TCF4-228ENST00000565393 XIRP1Q702N8 1843 aaKnown RBP9.47□□□□□ -0.89
TCF4-228ENST00000565393 CCDC144AA2RUR9 1427 aa9.47□□□□□ -0.89
TCF4-228ENST00000565393 DIP2AQ14689 1571 aa9.46□□□□□ -0.89
TCF4-228ENST00000565393 ROBO1Q9Y6N7 1651 aa9.46□□□□□ -0.89
TCF4-228ENST00000565393 ZNF772Q68DY9 489 aaPredicted RBP9.46□□□□□ -0.9
TCF4-228ENST00000565393 CHD2O14647 1828 aaKnown RBP9.46□□□□□ -0.9
TCF4-228ENST00000565393 MYO5BQ9ULV0 1848 aa9.46□□□□□ -0.9
TCF4-228ENST00000565393 NUTM2FA1L443 756 aa9.45□□□□□ -0.9
TCF4-228ENST00000565393 ESCO1Q5FWF5 840 aa9.45□□□□□ -0.9
TCF4-228ENST00000565393 WAPLQ7Z5K2 1190 aa9.45□□□□□ -0.9
TCF4-228ENST00000565393 SETD5Q9C0A6 1442 aa9.45□□□□□ -0.9
TCF4-228ENST00000565393 CLTCL1P53675 1640 aa9.45□□□□□ -0.9
TCF4-228ENST00000565393 ROBO2Q9HCK4 1378 aa9.44□□□□□ -0.9
TCF4-228ENST00000565393 SETBP1Q9Y6X0 1596 aa9.44□□□□□ -0.9
TCF4-228ENST00000565393 SPHKAPQ2M3C7 1700 aa9.44□□□□□ -0.9
TCF4-228ENST00000565393 NEXMIFQ5QGS0 1516 aa9.43□□□□□ -0.9
TCF4-228ENST00000565393 ANKRD30BQ9BXX2 1392 aa9.43□□□□□ -0.9
TCF4-228ENST00000565393 RXRBP28702 533 aa9.43□□□□□ -0.9
TCF4-228ENST00000565393 KDM2AQ9Y2K7 1162 aa9.43□□□□□ -0.9
TCF4-228ENST00000565393 DCCP43146 1447 aa9.42□□□□□ -0.9
TCF4-228ENST00000565393 MST1RQ04912 1400 aa9.42□□□□□ -0.9
TCF4-228ENST00000565393 ADAMTS2O95450 1211 aa9.42□□□□□ -0.9
TCF4-228ENST00000565393 CFAP70Q5T0N1 1121 aa9.42□□□□□ -0.9
TCF4-228ENST00000565393 NGLY1Q96IV0 654 aa9.42□□□□□ -0.9
TCF4-228ENST00000565393 C8orf37Q96NL8 207 aa9.42□□□□□ -0.9
TCF4-228ENST00000565393 ADGRL3Q9HAR2 1447 aa9.41□□□□□ -0.9
TCF4-228ENST00000565393 FOXO3O43524 673 aa9.41□□□□□ -0.9
TCF4-228ENST00000565393 C14orf93Q9H972 538 aaKnown RBP9.41□□□□□ -0.9
TCF4-228ENST00000565393 QTRT2Q9H974 415 aaKnown RBP9.41□□□□□ -0.9
TCF4-228ENST00000565393 PHLPP1O60346 1717 aa9.41□□□□□ -0.9
TCF4-228ENST00000565393 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.41□□□□□ -0.9
TCF4-228ENST00000565393 RAB3GAP2Q9H2M9 1393 aa9.4□□□□□ -0.9
TCF4-228ENST00000565393 XPCQ01831 940 aaPredicted RBP9.4□□□□□ -0.9
TCF4-228ENST00000565393 SAFB2Q14151 953 aaKnown RBP eCLIP9.4□□□□□ -0.9
TCF4-228ENST00000565393 DCAF11Q8TEB1 546 aa9.4□□□□□ -0.9
TCF4-228ENST00000565393 POGKQ9P215 609 aa9.4□□□□□ -0.9
TCF4-228ENST00000565393 C1orf167Q5SNV9 1468 aa9.4□□□□□ -0.91
TCF4-228ENST00000565393 NRXN3Q9Y4C0 1643 aa9.39□□□□□ -0.91
TCF4-228ENST00000565393 AFF2P51816 1311 aa9.39□□□□□ -0.91
TCF4-228ENST00000565393 LRPPRCP42704 1394 aaKnown RBP9.38□□□□□ -0.91
TCF4-228ENST00000565393 DHX57Q6P158 1386 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms