RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 COL17A1Q9UMD9 1497 aaPredicted RBP10.09□□□□□ -0.79
ATXN3-249ENST00000564606 WDR7Q9Y4E6 1490 aa10.09□□□□□ -0.79
ATXN3-249ENST00000564606 TRPM1Q7Z4N2 1603 aa10.08□□□□□ -0.8
ATXN3-249ENST00000564606 CCDC184Q52MB2 194 aa10.08□□□□□ -0.8
ATXN3-249ENST00000564606 KLHL34Q8N239 644 aa10.08□□□□□ -0.8
ATXN3-249ENST00000564606 RCAN3Q9UKA8 241 aa10.08□□□□□ -0.8
ATXN3-249ENST00000564606 KNSTRNQ9Y448 316 aa10.08□□□□□ -0.8
ATXN3-249ENST00000564606 PRDM15P57071 1507 aaPredicted RBP10.07□□□□□ -0.8
ATXN3-249ENST00000564606 SYCP2Q9BX26 1530 aa10.07□□□□□ -0.8
ATXN3-249ENST00000564606 BCORL1Q5H9F3 1711 aa10.07□□□□□ -0.8
ATXN3-249ENST00000564606 CDC42BPBQ9Y5S2 1711 aa10.07□□□□□ -0.8
ATXN3-249ENST00000564606 NEURL4Q96JN8 1562 aa10.07□□□□□ -0.8
ATXN3-249ENST00000564606 RRP1P56182 461 aaKnown RBP10.07□□□□□ -0.8
ATXN3-249ENST00000564606 IRX6P78412 446 aaPredicted RBP10.07□□□□□ -0.8
ATXN3-249ENST00000564606 PLCD3Q8N3E9 789 aa10.07□□□□□ -0.8
ATXN3-249ENST00000564606 SPOCK2Q92563 424 aa10.07□□□□□ -0.8
ATXN3-249ENST00000564606 E9PCH4 1651 aa10.06□□□□□ -0.8
ATXN3-249ENST00000564606 NPC1L1Q9UHC9 1359 aa10.06□□□□□ -0.8
ATXN3-249ENST00000564606 WDR43Q15061 677 aaKnown RBP eCLIP10.06□□□□□ -0.8
ATXN3-249ENST00000564606 B4GALNT3Q6L9W6 998 aa10.06□□□□□ -0.8
ATXN3-249ENST00000564606 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.06□□□□□ -0.8
ATXN3-249ENST00000564606 SPAG9O60271 1321 aaKnown RBP10.06□□□□□ -0.8
ATXN3-249ENST00000564606 RTL5Q5HYW3 569 aaPredicted RBP10.05□□□□□ -0.8
ATXN3-249ENST00000564606 DDRGK1Q96HY6 314 aa10.05□□□□□ -0.8
ATXN3-249ENST00000564606 ZBTB47Q9UFB7 747 aaPredicted RBP10.05□□□□□ -0.8
ATXN3-249ENST00000564606 NOP58Q9Y2X3 529 aaKnown RBP10.05□□□□□ -0.8
ATXN3-249ENST00000564606 A2MP01023 1474 aa10.04□□□□□ -0.8
ATXN3-249ENST00000564606 AAMPQ13685 434 aa10.03□□□□□ -0.8
ATXN3-249ENST00000564606 RGL3Q3MIN7 710 aa10.03□□□□□ -0.8
ATXN3-249ENST00000564606 IPO9Q96P70 1041 aaKnown RBP10.03□□□□□ -0.8
ATXN3-249ENST00000564606 SCAF11Q99590 1463 aaKnown RBP10.03□□□□□ -0.8
ATXN3-249ENST00000564606 BLMP54132 1417 aaPredicted RBP10.02□□□□□ -0.81
ATXN3-249ENST00000564606 PER1O15534 1290 aaPredicted RBP10.01□□□□□ -0.81
ATXN3-249ENST00000564606 USP35Q9P2H5 1018 aa10.01□□□□□ -0.81
ATXN3-249ENST00000564606 TRPM2O94759 1503 aa10.01□□□□□ -0.81
ATXN3-249ENST00000564606 ABCC1P33527 1531 aa10.01□□□□□ -0.81
ATXN3-249ENST00000564606 AKT1S1Q96B36 256 aa10□□□□□ -0.81
ATXN3-249ENST00000564606 PANK3Q9H999 370 aa10□□□□□ -0.81
ATXN3-249ENST00000564606 DAXXQ9UER7 740 aaPredicted RBP10□□□□□ -0.81
ATXN3-249ENST00000564606 TTC37Q6PGP7 1564 aa10□□□□□ -0.81
ATXN3-249ENST00000564606 NINLQ9Y2I6 1382 aa10□□□□□ -0.81
ATXN3-249ENST00000564606 PTPRTO14522 1441 aa9.99□□□□□ -0.81
ATXN3-249ENST00000564606 PIK3C2GO75747 1445 aa9.99□□□□□ -0.81
ATXN3-249ENST00000564606 KIAA1210Q9ULL0 1709 aa9.99□□□□□ -0.81
ATXN3-249ENST00000564606 PPM1GO15355 546 aaPredicted RBP9.99□□□□□ -0.81
ATXN3-249ENST00000564606 REM2Q8IYK8 340 aaPredicted RBP9.99□□□□□ -0.81
ATXN3-249ENST00000564606 TESK2Q96S53 571 aa9.99□□□□□ -0.81
ATXN3-249ENST00000564606 SYNMO15061 1565 aa9.99□□□□□ -0.81
ATXN3-249ENST00000564606 RNF17Q9BXT8 1623 aaKnown RBP9.99□□□□□ -0.81
ATXN3-249ENST00000564606 CHD1O14646 1710 aa9.99□□□□□ -0.81
ATXN3-249ENST00000564606 PLA2R1Q13018 1463 aa9.98□□□□□ -0.81
ATXN3-249ENST00000564606 TET3O43151 1660 aa9.97□□□□□ -0.81
ATXN3-249ENST00000564606 GOLGA2Q08379 1002 aa9.97□□□□□ -0.81
ATXN3-249ENST00000564606 PUS7Q96PZ0 661 aaKnown RBP9.97□□□□□ -0.81
ATXN3-249ENST00000564606 NPM1P06748 294 aaKnown RBP eCLIP9.96□□□□□ -0.82
ATXN3-249ENST00000564606 CENPQQ7L2Z9 268 aaPredicted RBP9.96□□□□□ -0.82
ATXN3-249ENST00000564606 RPGRIP1LQ68CZ1 1315 aa9.96□□□□□ -0.82
ATXN3-249ENST00000564606 SBNO2Q9Y2G9 1366 aa9.96□□□□□ -0.82
ATXN3-249ENST00000564606 MYOM2P54296 1465 aa9.96□□□□□ -0.82
ATXN3-249ENST00000564606 CLASP1Q7Z460 1538 aa9.96□□□□□ -0.82
ATXN3-249ENST00000564606 ASXL1Q8IXJ9 1541 aa9.96□□□□□ -0.82
ATXN3-249ENST00000564606 ZCCHC11Q5TAX3 1644 aaKnown RBP9.96□□□□□ -0.82
ATXN3-249ENST00000564606 RGL2O15211 777 aa9.95□□□□□ -0.82
ATXN3-249ENST00000564606 CNGB1Q14028 1251 aaPredicted RBP9.95□□□□□ -0.82
ATXN3-249ENST00000564606 NBPF1Q3BBV0 1214 aa9.95□□□□□ -0.82
ATXN3-249ENST00000564606 RBM42Q9BTD8 480 aaKnown RBP9.95□□□□□ -0.82
ATXN3-249ENST00000564606 DEPDC5O75140 1603 aa9.94□□□□□ -0.82
ATXN3-249ENST00000564606 MNX1P50219 401 aaPredicted RBP9.94□□□□□ -0.82
ATXN3-249ENST00000564606 CC2D1BQ5T0F9 858 aaKnown RBP9.94□□□□□ -0.82
ATXN3-249ENST00000564606 CREBZFQ9NS37 354 aa9.94□□□□□ -0.82
ATXN3-249ENST00000564606 CEP152O94986 1710 aa9.93□□□□□ -0.82
ATXN3-249ENST00000564606 SPHKAPQ2M3C7 1700 aa9.93□□□□□ -0.82
ATXN3-249ENST00000564606 MADDQ8WXG6 1647 aa9.93□□□□□ -0.82
ATXN3-249ENST00000564606 CFAP74Q9C0B2 1584 aa9.93□□□□□ -0.82
ATXN3-249ENST00000564606 DISP3Q9P2K9 1392 aa9.93□□□□□ -0.82
ATXN3-249ENST00000564606 E9PSI1 815 aa9.93□□□□□ -0.82
ATXN3-249ENST00000564606 ECM2O94769 699 aaPredicted RBP9.93□□□□□ -0.82
ATXN3-249ENST00000564606 CLEC11AQ9Y240 323 aa9.93□□□□□ -0.82
ATXN3-249ENST00000564606 ATP7AQ04656 1500 aa9.92□□□□□ -0.82
ATXN3-249ENST00000564606 ZFYVE16Q7Z3T8 1539 aa9.92□□□□□ -0.82
ATXN3-249ENST00000564606 PPP2R1AP30153 589 aa9.92□□□□□ -0.82
ATXN3-249ENST00000564606 SPDYE1Q8NFV5 336 aaPredicted RBP9.92□□□□□ -0.82
ATXN3-249ENST00000564606 CFAP53Q96M91 514 aa9.92□□□□□ -0.82
ATXN3-249ENST00000564606 IQGAP1P46940 1657 aa9.92□□□□□ -0.82
ATXN3-249ENST00000564606 FANCAO15360 1455 aa9.91□□□□□ -0.82
ATXN3-249ENST00000564606 KDM5AP29375 1690 aaKnown RBP9.91□□□□□ -0.82
ATXN3-249ENST00000564606 NUBP1P53384 320 aa9.91□□□□□ -0.82
ATXN3-249ENST00000564606 VWDEQ8N2E2 1590 aa9.91□□□□□ -0.82
ATXN3-249ENST00000564606 LMTK2Q8IWU2 1503 aa9.91□□□□□ -0.82
ATXN3-249ENST00000564606 TRAPPC8Q9Y2L5 1435 aa9.9□□□□□ -0.82
ATXN3-249ENST00000564606 CGNL1Q0VF96 1302 aa9.9□□□□□ -0.82
ATXN3-249ENST00000564606 PITPNM1O00562 1244 aa9.9□□□□□ -0.82
ATXN3-249ENST00000564606 PDE4AP27815 886 aa9.9□□□□□ -0.82
ATXN3-249ENST00000564606 EXOC6Q8TAG9 804 aa9.9□□□□□ -0.82
ATXN3-249ENST00000564606 BACH2Q9BYV9 841 aa9.9□□□□□ -0.82
ATXN3-249ENST00000564606 PNNQ9H307 717 aaKnown RBP9.9□□□□□ -0.82
ATXN3-249ENST00000564606 ADGRL1O94910 1474 aa9.9□□□□□ -0.83
ATXN3-249ENST00000564606 ZNF518AQ6AHZ1 1483 aa9.9□□□□□ -0.83
ATXN3-249ENST00000564606 NSD2O96028 1365 aa9.89□□□□□ -0.83
ATXN3-249ENST00000564606 ABCA9Q8IUA7 1624 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms