RNA–Protein interactions for RNA: ENST00000564534.1

LINC01858-201, Transcript of long intergenic non-protein coding RNA 1858, humanhuman

TSL 1 (best) BASIC

Gene LINC01858, Length 1,838 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01858-201ENST00000564534 PLEKHG5O94827 1062 aa13.22□□□□□ -0.29
LINC01858-201ENST00000564534 ARHGAP31Q2M1Z3 1444 aa13.21□□□□□ -0.29
LINC01858-201ENST00000564534 PKD2Q13563 968 aa13.21□□□□□ -0.29
LINC01858-201ENST00000564534 RPRD2Q5VT52 1461 aaKnown RBP13.21□□□□□ -0.3
LINC01858-201ENST00000564534 RIMS1Q86UR5 1692 aaKnown RBP13.2□□□□□ -0.3
LINC01858-201ENST00000564534 ZMYM3Q14202 1370 aa13.2□□□□□ -0.3
LINC01858-201ENST00000564534 DHX57Q6P158 1386 aaKnown RBP13.2□□□□□ -0.3
LINC01858-201ENST00000564534 NPATQ14207 1427 aa13.19□□□□□ -0.3
LINC01858-201ENST00000564534 E9PCH4 1651 aa13.19□□□□□ -0.3
LINC01858-201ENST00000564534 CD44P16070 742 aaKnown RBP13.18□□□□□ -0.3
LINC01858-201ENST00000564534 EVX2Q03828 476 aa13.18□□□□□ -0.3
LINC01858-201ENST00000564534 C3P01024 1663 aa13.17□□□□□ -0.3
LINC01858-201ENST00000564534 KDM4FA0A1W2PPD8 638 aa13.16□□□□□ -0.3
LINC01858-201ENST00000564534 PTPRMP28827 1452 aa13.15□□□□□ -0.3
LINC01858-201ENST00000564534 CCER1Q8TC90 406 aaPredicted RBP13.15□□□□□ -0.3
LINC01858-201ENST00000564534 PREX1Q8TCU6 1659 aa13.15□□□□□ -0.3
LINC01858-201ENST00000564534 SPHKAPQ2M3C7 1700 aa13.14□□□□□ -0.31
LINC01858-201ENST00000564534 CEBPAP49715 358 aaPredicted RBP13.14□□□□□ -0.31
LINC01858-201ENST00000564534 MIER1Q8N108 512 aa13.14□□□□□ -0.31
LINC01858-201ENST00000564534 ERVK-7P63135 1459 aa13.14□□□□□ -0.31
LINC01858-201ENST00000564534 PTPRTO14522 1441 aa13.13□□□□□ -0.31
LINC01858-201ENST00000564534 SPATA31D1Q6ZQQ2 1576 aa13.13□□□□□ -0.31
LINC01858-201ENST00000564534 CFAP65Q6ZU64 1925 aaKnown RBP13.13□□□□□ -0.31
LINC01858-201ENST00000564534 FBXO31Q5XUX0 539 aaPredicted RBP13.13□□□□□ -0.31
LINC01858-201ENST00000564534 FBXO3Q9UK99 471 aa13.13□□□□□ -0.31
LINC01858-201ENST00000564534 NOS1P29475 1434 aa13.13□□□□□ -0.31
LINC01858-201ENST00000564534 TRPM2O94759 1503 aa13.12□□□□□ -0.31
LINC01858-201ENST00000564534 ANKRD30BQ9BXX2 1392 aa13.12□□□□□ -0.31
LINC01858-201ENST00000564534 TNRQ92752 1358 aa13.11□□□□□ -0.31
LINC01858-201ENST00000564534 CLSPNQ9HAW4 1339 aa13.11□□□□□ -0.31
LINC01858-201ENST00000564534 CCDC144AA2RUR9 1427 aa13.11□□□□□ -0.31
LINC01858-201ENST00000564534 PAK3O75914 559 aaPredicted RBP13.11□□□□□ -0.31
LINC01858-201ENST00000564534 PLCD3Q8N3E9 789 aa13.11□□□□□ -0.31
LINC01858-201ENST00000564534 SLC52A1Q9NWF4 448 aa13.1□□□□□ -0.31
LINC01858-201ENST00000564534 PLA2R1Q13018 1463 aa13.1□□□□□ -0.31
LINC01858-201ENST00000564534 SYNMO15061 1565 aa13.09□□□□□ -0.31
LINC01858-201ENST00000564534 NLRP1Q9C000 1473 aa13.07□□□□□ -0.32
LINC01858-201ENST00000564534 SETD1BQ9UPS6 1966 aaKnown RBP13.07□□□□□ -0.32
LINC01858-201ENST00000564534 PIK3C2BO00750 1634 aa13.06□□□□□ -0.32
LINC01858-201ENST00000564534 CLTCL1P53675 1640 aa13.06□□□□□ -0.32
LINC01858-201ENST00000564534 UGGT1Q9NYU2 1555 aa13.06□□□□□ -0.32
LINC01858-201ENST00000564534 MNX1P50219 401 aaPredicted RBP13.06□□□□□ -0.32
LINC01858-201ENST00000564534 MYO3AQ8NEV4 1616 aa13.05□□□□□ -0.32
LINC01858-201ENST00000564534 IDI1Q13907 227 aa13.05□□□□□ -0.32
LINC01858-201ENST00000564534 ZRANB1Q9UGI0 708 aa13.05□□□□□ -0.32
LINC01858-201ENST00000564534 KIF1BO60333 1816 aa13.04□□□□□ -0.32
LINC01858-201ENST00000564534 UHRF1BP1Q6BDS2 1440 aa13.03□□□□□ -0.32
LINC01858-201ENST00000564534 CHGAP10645 457 aaKnown RBP13.03□□□□□ -0.32
LINC01858-201ENST00000564534 NEUROD1Q13562 356 aa13.03□□□□□ -0.32
LINC01858-201ENST00000564534 SIN3AQ96ST3 1273 aa13.03□□□□□ -0.32
LINC01858-201ENST00000564534 ZBTB47Q9UFB7 747 aaPredicted RBP13.03□□□□□ -0.32
LINC01858-201ENST00000564534 A2ML1A8K2U0 1454 aa13.02□□□□□ -0.33
LINC01858-201ENST00000564534 ADGRB3O60242 1522 aa13.02□□□□□ -0.33
LINC01858-201ENST00000564534 CEP170BQ9Y4F5 1589 aaPredicted RBP13.01□□□□□ -0.33
LINC01858-201ENST00000564534 KDM5AP29375 1690 aaKnown RBP13.01□□□□□ -0.33
LINC01858-201ENST00000564534 NEURL4Q96JN8 1562 aa13.01□□□□□ -0.33
LINC01858-201ENST00000564534 ZNF142P52746 1687 aaPredicted RBP13□□□□□ -0.33
LINC01858-201ENST00000564534 CLCN6P51797 869 aa13□□□□□ -0.33
LINC01858-201ENST00000564534 TMEM131LA2VDJ0 1609 aa13□□□□□ -0.33
LINC01858-201ENST00000564534 SPATA31E1Q6ZUB1 1445 aa13□□□□□ -0.33
LINC01858-201ENST00000564534 TONSLQ96HA7 1378 aa12.99□□□□□ -0.33
LINC01858-201ENST00000564534 GABBR2O75899 941 aa12.99□□□□□ -0.33
LINC01858-201ENST00000564534 ZNF326Q5BKZ1 582 aaKnown RBP12.99□□□□□ -0.33
LINC01858-201ENST00000564534 UBR1Q8IWV7 1749 aa12.99□□□□□ -0.33
LINC01858-201ENST00000564534 RGL3Q3MIN7 710 aa12.98□□□□□ -0.33
LINC01858-201ENST00000564534 THEMISQ8N1K5 641 aaPredicted RBP12.98□□□□□ -0.33
LINC01858-201ENST00000564534 ZNF579Q8NAF0 562 aaKnown RBP12.97□□□□□ -0.33
LINC01858-201ENST00000564534 MYO5BQ9ULV0 1848 aa12.96□□□□□ -0.33
LINC01858-201ENST00000564534 RPGRIP1LQ68CZ1 1315 aa12.96□□□□□ -0.33
LINC01858-201ENST00000564534 TIMELESSQ9UNS1 1208 aa12.96□□□□□ -0.33
LINC01858-201ENST00000564534 HDGFP51858 240 aaKnown RBP12.95□□□□□ -0.34
LINC01858-201ENST00000564534 TMEM2Q9UHN6 1383 aa12.94□□□□□ -0.34
LINC01858-201ENST00000564534 LMTK3Q96Q04 1460 aa12.94□□□□□ -0.34
LINC01858-201ENST00000564534 SLIT1O75093 1534 aa12.93□□□□□ -0.34
LINC01858-201ENST00000564534 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.93□□□□□ -0.34
LINC01858-201ENST00000564534 STAC3Q96MF2 364 aa12.93□□□□□ -0.34
LINC01858-201ENST00000564534 RIMS2Q9UQ26 1411 aa12.93□□□□□ -0.34
LINC01858-201ENST00000564534 DCAF11Q8TEB1 546 aa12.92□□□□□ -0.34
LINC01858-201ENST00000564534 L3MBTL2Q969R5 705 aa12.92□□□□□ -0.34
LINC01858-201ENST00000564534 EID1Q9Y6B2 187 aa12.92□□□□□ -0.34
LINC01858-201ENST00000564534 NEXMIFQ5QGS0 1516 aa12.92□□□□□ -0.34
LINC01858-201ENST00000564534 PPP1R15AO75807 674 aaPredicted RBP12.92□□□□□ -0.34
LINC01858-201ENST00000564534 ARHGAP23Q9P227 1491 aa12.92□□□□□ -0.34
LINC01858-201ENST00000564534 PPLO60437 1756 aa12.92□□□□□ -0.34
LINC01858-201ENST00000564534 ZFYVE9O95405 1425 aa12.91□□□□□ -0.34
LINC01858-201ENST00000564534 VGFO15240 615 aaPredicted RBP12.91□□□□□ -0.34
LINC01858-201ENST00000564534 IFT172Q9UG01 1749 aa12.91□□□□□ -0.34
LINC01858-201ENST00000564534 MYOM2P54296 1465 aa12.9□□□□□ -0.34
LINC01858-201ENST00000564534 TXNDC2Q86VQ3 553 aa12.9□□□□□ -0.34
LINC01858-201ENST00000564534 ANKLE2Q86XL3 938 aa12.9□□□□□ -0.34
LINC01858-201ENST00000564534 TSPYL2Q9H2G4 693 aaPredicted RBP12.9□□□□□ -0.34
LINC01858-201ENST00000564534 KDM2AQ9Y2K7 1162 aa12.9□□□□□ -0.34
LINC01858-201ENST00000564534 SCAF11Q99590 1463 aaKnown RBP12.89□□□□□ -0.35
LINC01858-201ENST00000564534 ZEB1P37275 1124 aaPredicted RBP12.89□□□□□ -0.35
LINC01858-201ENST00000564534 NUTM2DQ5VT03 806 aaPredicted RBP12.89□□□□□ -0.35
LINC01858-201ENST00000564534 VASPP50552 380 aaPredicted RBP12.88□□□□□ -0.35
LINC01858-201ENST00000564534 HSPA2P54652 639 aa12.88□□□□□ -0.35
LINC01858-201ENST00000564534 POLR1AO95602 1720 aaPredicted RBP12.86□□□□□ -0.35
LINC01858-201ENST00000564534 LTKP29376 864 aa12.86□□□□□ -0.35
LINC01858-201ENST00000564534 ADGRF5Q8IZF2 1346 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms