RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 RICTORQ6R327 1708 aa9.14□□□□□ -0.95
CDH13-206ENST00000562601 SCAPERQ9BY12 1400 aa9.14□□□□□ -0.95
CDH13-206ENST00000562601 PREX2Q70Z35 1606 aa9.13□□□□□ -0.95
CDH13-206ENST00000562601 TIAM1Q13009 1591 aa9.13□□□□□ -0.95
CDH13-206ENST00000562601 KANK4Q5T7N3 995 aaPredicted RBP9.13□□□□□ -0.95
CDH13-206ENST00000562601 CDAN1Q8IWY9 1227 aa9.13□□□□□ -0.95
CDH13-206ENST00000562601 DENND4BO75064 1496 aaPredicted RBP9.13□□□□□ -0.95
CDH13-206ENST00000562601 FOXK1P85037 733 aa9.12□□□□□ -0.95
CDH13-206ENST00000562601 DOK7Q18PE1 504 aa9.12□□□□□ -0.95
CDH13-206ENST00000562601 CCNB3Q8WWL7 1395 aa9.12□□□□□ -0.95
CDH13-206ENST00000562601 EHBP1L1Q8N3D4 1523 aa9.11□□□□□ -0.95
CDH13-206ENST00000562601 GPATCH8Q9UKJ3 1502 aaKnown RBP9.11□□□□□ -0.95
CDH13-206ENST00000562601 NCKAP5LQ9HCH0 1330 aa9.11□□□□□ -0.95
CDH13-206ENST00000562601 KDM4FA0A1W2PPD8 638 aa9.11□□□□□ -0.95
CDH13-206ENST00000562601 RIMBP2O15034 1052 aa9.11□□□□□ -0.95
CDH13-206ENST00000562601 CADPS2Q86UW7 1296 aa9.11□□□□□ -0.95
CDH13-206ENST00000562601 HAP1P54257 671 aaPredicted RBP9.1□□□□□ -0.95
CDH13-206ENST00000562601 AFAP1Q8N556 730 aa9.1□□□□□ -0.95
CDH13-206ENST00000562601 DDX27Q96GQ7 796 aaKnown RBP9.1□□□□□ -0.95
CDH13-206ENST00000562601 LARP6Q9BRS8 491 aaKnown RBP9.1□□□□□ -0.95
CDH13-206ENST00000562601 CFDP1Q9UEE9 299 aaPredicted RBP9.1□□□□□ -0.95
CDH13-206ENST00000562601 MYT1LQ9UL68 1186 aa9.1□□□□□ -0.95
CDH13-206ENST00000562601 SUPT6HQ7KZ85 1726 aaKnown RBP9.1□□□□□ -0.95
CDH13-206ENST00000562601 ARHGEF12Q9NZN5 1544 aa9.1□□□□□ -0.95
CDH13-206ENST00000562601 LRRC9Q6ZRR7 1453 aa9.09□□□□□ -0.95
CDH13-206ENST00000562601 POGZQ7Z3K3 1410 aa9.09□□□□□ -0.95
CDH13-206ENST00000562601 HNRNPMP52272 730 aaKnown RBP eCLIP9.09□□□□□ -0.95
CDH13-206ENST00000562601 PPP1R15BQ5SWA1 713 aa9.09□□□□□ -0.95
CDH13-206ENST00000562601 TSHZ2Q9NRE2 1034 aa9.09□□□□□ -0.95
CDH13-206ENST00000562601 ITSN2Q9NZM3 1697 aa9.09□□□□□ -0.95
CDH13-206ENST00000562601 NCOA2Q15596 1464 aa9.08□□□□□ -0.96
CDH13-206ENST00000562601 ZNF644Q9H582 1327 aaPredicted RBP9.08□□□□□ -0.96
CDH13-206ENST00000562601 SAMD9LQ8IVG5 1584 aa9.08□□□□□ -0.96
CDH13-206ENST00000562601 DSG2Q14126 1118 aa9.08□□□□□ -0.96
CDH13-206ENST00000562601 MFSD10Q14728 455 aa9.08□□□□□ -0.96
CDH13-206ENST00000562601 ZNF710Q8N1W2 664 aa9.08□□□□□ -0.96
CDH13-206ENST00000562601 WDR70Q9NW82 654 aa9.08□□□□□ -0.96
CDH13-206ENST00000562601 ARID4BQ4LE39 1312 aaPredicted RBP9.07□□□□□ -0.96
CDH13-206ENST00000562601 YEATS2Q9ULM3 1422 aa9.07□□□□□ -0.96
CDH13-206ENST00000562601 TRAPPC8Q9Y2L5 1435 aa9.07□□□□□ -0.96
CDH13-206ENST00000562601 ABCC1P33527 1531 aa9.07□□□□□ -0.96
CDH13-206ENST00000562601 PLPP6Q8IY26 295 aa9.07□□□□□ -0.96
CDH13-206ENST00000562601 ZFYVE16Q7Z3T8 1539 aa9.06□□□□□ -0.96
CDH13-206ENST00000562601 SYCP2Q9BX26 1530 aa9.06□□□□□ -0.96
CDH13-206ENST00000562601 SIGLEC1Q9BZZ2 1709 aa9.06□□□□□ -0.96
CDH13-206ENST00000562601 PPARGC1BQ86YN6 1023 aaKnown RBP9.06□□□□□ -0.96
CDH13-206ENST00000562601 ZSWIM6Q9HCJ5 1215 aa9.06□□□□□ -0.96
CDH13-206ENST00000562601 MAP3K1Q13233 1512 aa9.05□□□□□ -0.96
CDH13-206ENST00000562601 ZMYM4Q5VZL5 1548 aa9.05□□□□□ -0.96
CDH13-206ENST00000562601 ARHGEF40Q8TER5 1519 aa9.05□□□□□ -0.96
CDH13-206ENST00000562601 ZNF518AQ6AHZ1 1483 aa9.05□□□□□ -0.96
CDH13-206ENST00000562601 SLC34A2O95436 690 aa9.05□□□□□ -0.96
CDH13-206ENST00000562601 HOXB3P14651 431 aaPredicted RBP9.04□□□□□ -0.96
CDH13-206ENST00000562601 MLECQ14165 292 aa9.04□□□□□ -0.96
CDH13-206ENST00000562601 KDM5CP41229 1560 aa9.03□□□□□ -0.96
CDH13-206ENST00000562601 HECW2Q9P2P5 1572 aa9.03□□□□□ -0.96
CDH13-206ENST00000562601 MAGI2Q86UL8 1455 aa9.02□□□□□ -0.96
CDH13-206ENST00000562601 ABCA6Q8N139 1617 aa9.02□□□□□ -0.96
CDH13-206ENST00000562601 KIDINS220Q9ULH0 1771 aa9.02□□□□□ -0.97
CDH13-206ENST00000562601 BCORL1Q5H9F3 1711 aa9.02□□□□□ -0.97
CDH13-206ENST00000562601 SPAG9O60271 1321 aaKnown RBP9.02□□□□□ -0.97
CDH13-206ENST00000562601 ATP10AO60312 1499 aa9.02□□□□□ -0.97
CDH13-206ENST00000562601 CAMSAP2Q08AD1 1489 aa9.02□□□□□ -0.97
CDH13-206ENST00000562601 TBC1D12O60347 775 aa9.01□□□□□ -0.97
CDH13-206ENST00000562601 DIP2CQ9Y2E4 1556 aa9.01□□□□□ -0.97
CDH13-206ENST00000562601 PLEKHH2Q8IVE3 1493 aa9.01□□□□□ -0.97
CDH13-206ENST00000562601 MYOM3Q5VTT5 1437 aa9□□□□□ -0.97
CDH13-206ENST00000562601 KIAA1107Q9UPP5 1409 aa9□□□□□ -0.97
CDH13-206ENST00000562601 MBD5Q9P267 1494 aa9□□□□□ -0.97
CDH13-206ENST00000562601 MLH3Q9UHC1 1453 aa9□□□□□ -0.97
CDH13-206ENST00000562601 ADAMTSL3P82987 1691 aa9□□□□□ -0.97
CDH13-206ENST00000562601 C9orf84Q5VXU9 1444 aa8.99□□□□□ -0.97
CDH13-206ENST00000562601 MADDQ8WXG6 1647 aa8.99□□□□□ -0.97
CDH13-206ENST00000562601 PTCD2Q8WV60 388 aaKnown RBP8.99□□□□□ -0.97
CDH13-206ENST00000562601 RIMS1Q86UR5 1692 aaKnown RBP8.99□□□□□ -0.97
CDH13-206ENST00000562601 VSIG10Q8N0Z9 540 aa8.98□□□□□ -0.97
CDH13-206ENST00000562601 ATP7AQ04656 1500 aa8.98□□□□□ -0.97
CDH13-206ENST00000562601 INO80Q9ULG1 1556 aaPredicted RBP8.98□□□□□ -0.97
CDH13-206ENST00000562601 FER1L4A9Z1Z3 1794 aa8.97□□□□□ -0.97
CDH13-206ENST00000562601 POTEB3A0JP26 581 aa8.97□□□□□ -0.97
CDH13-206ENST00000562601 HOXB1P14653 301 aaPredicted RBP8.97□□□□□ -0.97
CDH13-206ENST00000562601 CAMK2BQ13554 666 aa8.97□□□□□ -0.97
CDH13-206ENST00000562601 E2F4Q16254 413 aa8.97□□□□□ -0.97
CDH13-206ENST00000562601 POTEBQ6S5H4 581 aa8.97□□□□□ -0.97
CDH13-206ENST00000562601 MARVELD3Q96A59 401 aa8.97□□□□□ -0.97
CDH13-206ENST00000562601 PCDHGA4Q9Y5G9 962 aa8.97□□□□□ -0.97
CDH13-206ENST00000562601 PTPN23Q9H3S7 1636 aa8.97□□□□□ -0.97
CDH13-206ENST00000562601 CCDC141Q6ZP82 1450 aa8.96□□□□□ -0.97
CDH13-206ENST00000562601 ZNF316A6NFI3 1004 aaPredicted RBP8.96□□□□□ -0.98
CDH13-206ENST00000562601 MIA2Q96PC5 1412 aa8.96□□□□□ -0.98
CDH13-206ENST00000562601 PTPRMP28827 1452 aa8.96□□□□□ -0.98
CDH13-206ENST00000562601 ARHGEF5Q12774 1597 aa8.95□□□□□ -0.98
CDH13-206ENST00000562601 ADGBQ8N7X0 1667 aa8.95□□□□□ -0.98
CDH13-206ENST00000562601 TSPY4P0CV99 314 aa8.95□□□□□ -0.98
CDH13-206ENST00000562601 TSPY10P0CW01 314 aa8.95□□□□□ -0.98
CDH13-206ENST00000562601 FAM50AQ14320 339 aaKnown RBP8.95□□□□□ -0.98
CDH13-206ENST00000562601 GPR153Q6NV75 609 aa8.95□□□□□ -0.98
CDH13-206ENST00000562601 SPNS2Q8IVW8 549 aa8.95□□□□□ -0.98
CDH13-206ENST00000562601 OXER1Q8TDS5 423 aa8.95□□□□□ -0.98
CDH13-206ENST00000562601 FGD6Q6ZV73 1430 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms