RNA–Protein interactions for RNA: ENST00000560731.5

MARK3-222, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-222	ENST00000560731	CCDC18	Q5T9S5	1454 aa		11.7	□□□□□ -0.54
MARK3-222	ENST00000560731	ANKRD13D	Q6ZTN6	518 aa		11.7	□□□□□ -0.54
MARK3-222	ENST00000560731	PTPRG	P23470	1445 aa		11.69	□□□□□ -0.54
MARK3-222	ENST00000560731	ARHGAP33	O14559	1287 aa		11.69	□□□□□ -0.54
MARK3-222	ENST00000560731	EPRS	P07814	1512 aa	Known RBP	11.69	□□□□□ -0.54
MARK3-222	ENST00000560731	HECW1	Q76N89	1606 aa		11.68	□□□□□ -0.54
MARK3-222	ENST00000560731	RRBP1	Q9P2E9	1410 aa	Known RBP	11.68	□□□□□ -0.54
MARK3-222	ENST00000560731	MAP3K9	P80192	1104 aa		11.67	□□□□□ -0.54
MARK3-222	ENST00000560731	E2F4	Q16254	413 aa		11.67	□□□□□ -0.54
MARK3-222	ENST00000560731	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.67	□□□□□ -0.54
MARK3-222	ENST00000560731	MYT1L	Q9UL68	1186 aa		11.67	□□□□□ -0.54
MARK3-222	ENST00000560731	NUP153	P49790	1475 aa	Known RBP	11.67	□□□□□ -0.54
MARK3-222	ENST00000560731	MTUS2	Q5JR59	1369 aa		11.67	□□□□□ -0.54
MARK3-222	ENST00000560731	LRRIQ1	Q96JM4	1722 aa		11.66	□□□□□ -0.54
MARK3-222	ENST00000560731	PLB1	Q6P1J6	1458 aa		11.66	□□□□□ -0.54
MARK3-222	ENST00000560731	POTEE	Q6S8J3	1075 aa		11.66	□□□□□ -0.54
MARK3-222	ENST00000560731	RAPGEF6	Q8TEU7	1601 aa		11.66	□□□□□ -0.54
MARK3-222	ENST00000560731	KCNH8	Q96L42	1107 aa		11.65	□□□□□ -0.54
MARK3-222	ENST00000560731	AXIN2	Q9Y2T1	843 aa		11.65	□□□□□ -0.54
MARK3-222	ENST00000560731	ABCA8	O94911	1581 aa		11.65	□□□□□ -0.54
MARK3-222	ENST00000560731	PHLDB1	Q86UU1	1377 aa		11.65	□□□□□ -0.55
MARK3-222	ENST00000560731	EVI5	O60447	810 aa		11.64	□□□□□ -0.55
MARK3-222	ENST00000560731	ARHGEF1	Q92888	912 aa	Known RBP	11.64	□□□□□ -0.55
MARK3-222	ENST00000560731	CDK11A	Q9UQ88	783 aa	Predicted RBP	11.64	□□□□□ -0.55
MARK3-222	ENST00000560731	CCNB3	Q8WWL7	1395 aa		11.64	□□□□□ -0.55
MARK3-222	ENST00000560731	RNF166	Q96A37	237 aa	Predicted RBP	11.63	□□□□□ -0.55
MARK3-222	ENST00000560731	CDK13	Q14004	1512 aa	Known RBP	11.62	□□□□□ -0.55
MARK3-222	ENST00000560731	MAGI3	Q5TCQ9	1506 aa		11.62	□□□□□ -0.55
MARK3-222	ENST00000560731	CAMK2B	Q13554	666 aa		11.62	□□□□□ -0.55
MARK3-222	ENST00000560731	EMILIN3	Q9NT22	766 aa		11.62	□□□□□ -0.55
MARK3-222	ENST00000560731	ERCC6L2	Q5T890	1561 aa		11.62	□□□□□ -0.55
MARK3-222	ENST00000560731	UACA	Q9BZF9	1416 aa		11.61	□□□□□ -0.55
MARK3-222	ENST00000560731	ARHGEF11	O15085	1522 aa		11.61	□□□□□ -0.55
MARK3-222	ENST00000560731	EHBP1L1	Q8N3D4	1523 aa		11.61	□□□□□ -0.55
MARK3-222	ENST00000560731	TK2	O00142	265 aa		11.61	□□□□□ -0.55
MARK3-222	ENST00000560731	ZNF454	Q8N9F8	522 aa		11.61	□□□□□ -0.55
MARK3-222	ENST00000560731	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	11.61	□□□□□ -0.55
MARK3-222	ENST00000560731	ATP10B	O94823	1461 aa		11.61	□□□□□ -0.55
MARK3-222	ENST00000560731	NCOA2	Q15596	1464 aa		11.6	□□□□□ -0.55
MARK3-222	ENST00000560731	ARID3C	A6NKF2	412 aa		11.6	□□□□□ -0.55
MARK3-222	ENST00000560731	FOSB	P53539	338 aa		11.6	□□□□□ -0.55
MARK3-222	ENST00000560731	PLEKHD1	A6NEE1	506 aa		11.59	□□□□□ -0.55
MARK3-222	ENST00000560731	HRC	P23327	699 aa		11.59	□□□□□ -0.55
MARK3-222	ENST00000560731	ADGRD1	Q6QNK2	874 aa		11.58	□□□□□ -0.56
MARK3-222	ENST00000560731	BCL2L12	Q9HB09	334 aa		11.58	□□□□□ -0.56
MARK3-222	ENST00000560731	TRO	Q12816	1431 aa	Predicted RBP	11.58	□□□□□ -0.56
MARK3-222	ENST00000560731	MYOM3	Q5VTT5	1437 aa		11.57	□□□□□ -0.56
MARK3-222	ENST00000560731	FGD6	Q6ZV73	1430 aa		11.57	□□□□□ -0.56
MARK3-222	ENST00000560731	SUPT6H	Q7KZ85	1726 aa	Known RBP	11.57	□□□□□ -0.56
MARK3-222	ENST00000560731	UHRF1BP1L	A0JNW5	1464 aa		11.57	□□□□□ -0.56
MARK3-222	ENST00000560731	PSEN2	P49810	448 aa		11.56	□□□□□ -0.56
MARK3-222	ENST00000560731	KCNK17	Q96T54	332 aa		11.56	□□□□□ -0.56
MARK3-222	ENST00000560731	MIA2	Q96PC5	1412 aa		11.54	□□□□□ -0.56
MARK3-222	ENST00000560731	FAM50A	Q14320	339 aa	Known RBP	11.54	□□□□□ -0.56
MARK3-222	ENST00000560731	DMRTA1	Q5VZB9	504 aa		11.54	□□□□□ -0.56
MARK3-222	ENST00000560731	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.54	□□□□□ -0.56
MARK3-222	ENST00000560731	ZDHHC16	Q969W1	377 aa		11.54	□□□□□ -0.56
MARK3-222	ENST00000560731	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.54	□□□□□ -0.56
MARK3-222	ENST00000560731	ABCC2	Q92887	1545 aa		11.54	□□□□□ -0.56
MARK3-222	ENST00000560731	PTPRE	P23469	700 aa		11.53	□□□□□ -0.56
MARK3-222	ENST00000560731	LMOD2	Q6P5Q4	547 aa		11.52	□□□□□ -0.57
MARK3-222	ENST00000560731	ZEB1	P37275	1124 aa	Predicted RBP	11.51	□□□□□ -0.57
MARK3-222	ENST00000560731	SLC4A5	Q9BY07	1137 aa		11.51	□□□□□ -0.57
MARK3-222	ENST00000560731	TCOF1	Q13428	1488 aa	Known RBP	11.51	□□□□□ -0.57
MARK3-222	ENST00000560731	KDM5B	Q9UGL1	1544 aa		11.5	□□□□□ -0.57
MARK3-222	ENST00000560731	SEMA3E	O15041	775 aa		11.5	□□□□□ -0.57
MARK3-222	ENST00000560731	TESPA1	A2RU30	521 aa	Predicted RBP	11.49	□□□□□ -0.57
MARK3-222	ENST00000560731	TULP1	O00294	542 aa	Predicted RBP	11.49	□□□□□ -0.57
MARK3-222	ENST00000560731	DPYSL4	O14531	572 aa		11.49	□□□□□ -0.57
MARK3-222	ENST00000560731	HR	O43593	1189 aa		11.49	□□□□□ -0.57
MARK3-222	ENST00000560731	PHF14	O94880	888 aa		11.49	□□□□□ -0.57
MARK3-222	ENST00000560731	FBXW7	Q969H0	707 aa		11.49	□□□□□ -0.57
MARK3-222	ENST00000560731	STAC3	Q96MF2	364 aa		11.49	□□□□□ -0.57
MARK3-222	ENST00000560731	ADCY10	Q96PN6	1610 aa		11.49	□□□□□ -0.57
MARK3-222	ENST00000560731	ITGAE	P38570	1179 aa		11.48	□□□□□ -0.57
MARK3-222	ENST00000560731	PCDHGA10	Q9Y5H3	936 aa		11.48	□□□□□ -0.57
MARK3-222	ENST00000560731	ABCC10	Q5T3U5	1492 aa		11.48	□□□□□ -0.57
MARK3-222	ENST00000560731	GPATCH8	Q9UKJ3	1502 aa	Known RBP	11.48	□□□□□ -0.57
MARK3-222	ENST00000560731	TYW1B	Q6NUM6	668 aa		11.47	□□□□□ -0.57
MARK3-222	ENST00000560731	CCER1	Q8TC90	406 aa	Predicted RBP	11.47	□□□□□ -0.57
MARK3-222	ENST00000560731	ADAM33	Q9BZ11	813 aa		11.47	□□□□□ -0.57
MARK3-222	ENST00000560731	VPS9D1	Q9Y2B5	631 aa		11.47	□□□□□ -0.57
MARK3-222	ENST00000560731	PTPN23	Q9H3S7	1636 aa		11.46	□□□□□ -0.57
MARK3-222	ENST00000560731	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.46	□□□□□ -0.57
MARK3-222	ENST00000560731	EPAS1	Q99814	870 aa		11.46	□□□□□ -0.57
MARK3-222	ENST00000560731	CFDP1	Q9UEE9	299 aa	Predicted RBP	11.46	□□□□□ -0.57
MARK3-222	ENST00000560731	PTPRK	Q15262	1439 aa		11.45	□□□□□ -0.58
MARK3-222	ENST00000560731	SETD5	Q9C0A6	1442 aa		11.45	□□□□□ -0.58
MARK3-222	ENST00000560731	KIF14	Q15058	1648 aa		11.44	□□□□□ -0.58
MARK3-222	ENST00000560731	ZNF644	Q9H582	1327 aa	Predicted RBP	11.43	□□□□□ -0.58
MARK3-222	ENST00000560731	ZCCHC11	Q5TAX3	1644 aa	Known RBP	11.42	□□□□□ -0.58
MARK3-222	ENST00000560731	PDIA6	Q15084	440 aa		11.42	□□□□□ -0.58
MARK3-222	ENST00000560731	ZBED2	Q9BTP6	218 aa		11.42	□□□□□ -0.58
MARK3-222	ENST00000560731	PPP1R3G	B7ZBB8	358 aa		11.41	□□□□□ -0.58
MARK3-222	ENST00000560731	HCST	Q9UBK5	93 aa		11.41	□□□□□ -0.58
MARK3-222	ENST00000560731	RAB3GAP2	Q9H2M9	1393 aa		11.41	□□□□□ -0.58
MARK3-222	ENST00000560731	ABCC5	O15440	1437 aa		11.4	□□□□□ -0.58
MARK3-222	ENST00000560731	CLSPN	Q9HAW4	1339 aa		11.39	□□□□□ -0.59
MARK3-222	ENST00000560731	HFM1	A2PYH4	1435 aa		11.39	□□□□□ -0.59
MARK3-222	ENST00000560731	SMYD5	Q6GMV2	418 aa		11.39	□□□□□ -0.59

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