RNA–Protein interactions for RNA: ENST00000560407.1

NEO1-210, Transcript of neogenin 1, humanhuman

TSL 3

Gene NEO1, Length 468 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-210ENST00000560407 LRRC7Q96NW7 1537 aa8.58□□□□□ -1.04
NEO1-210ENST00000560407 INO80Q9ULG1 1556 aaPredicted RBP8.57□□□□□ -1.04
NEO1-210ENST00000560407 C19orf67A6NJJ6 358 aa8.57□□□□□ -1.04
NEO1-210ENST00000560407 KCNA6P17658 529 aa8.57□□□□□ -1.04
NEO1-210ENST00000560407 NUBP1P53384 320 aa8.57□□□□□ -1.04
NEO1-210ENST00000560407 ZNF772Q68DY9 489 aaPredicted RBP8.57□□□□□ -1.04
NEO1-210ENST00000560407 PROSER2Q86WR7 435 aaPredicted RBP8.57□□□□□ -1.04
NEO1-210ENST00000560407 DEPDC5O75140 1603 aa8.57□□□□□ -1.04
NEO1-210ENST00000560407 CCDC141Q6ZP82 1450 aa8.57□□□□□ -1.04
NEO1-210ENST00000560407 VWDEQ8N2E2 1590 aa8.56□□□□□ -1.04
NEO1-210ENST00000560407 CEP162Q5TB80 1403 aa8.56□□□□□ -1.04
NEO1-210ENST00000560407 POTEAQ6S8J7 498 aa8.56□□□□□ -1.04
NEO1-210ENST00000560407 ADGBQ8N7X0 1667 aa8.56□□□□□ -1.04
NEO1-210ENST00000560407 CLCN6P51797 869 aa8.55□□□□□ -1.04
NEO1-210ENST00000560407 BCANQ96GW7 911 aa8.55□□□□□ -1.04
NEO1-210ENST00000560407 SCAF11Q99590 1463 aaKnown RBP8.55□□□□□ -1.04
NEO1-210ENST00000560407 NEURL4Q96JN8 1562 aa8.55□□□□□ -1.04
NEO1-210ENST00000560407 CDC42BPAQ5VT25 1732 aa8.54□□□□□ -1.04
NEO1-210ENST00000560407 LTKP29376 864 aa8.54□□□□□ -1.04
NEO1-210ENST00000560407 MEX3CQ5U5Q3 659 aaKnown RBP8.54□□□□□ -1.04
NEO1-210ENST00000560407 TSPYL2Q9H2G4 693 aaPredicted RBP8.54□□□□□ -1.04
NEO1-210ENST00000560407 SLAIN2Q9P270 581 aa8.54□□□□□ -1.04
NEO1-210ENST00000560407 ZRANB1Q9UGI0 708 aa8.54□□□□□ -1.04
NEO1-210ENST00000560407 CIZ1Q9ULV3 898 aaPredicted RBP8.54□□□□□ -1.04
NEO1-210ENST00000560407 MSH6P52701 1360 aa8.53□□□□□ -1.04
NEO1-210ENST00000560407 JCADQ9P266 1359 aa8.53□□□□□ -1.04
NEO1-210ENST00000560407 SPATA31A6Q5VVP1 1343 aa8.53□□□□□ -1.04
NEO1-210ENST00000560407 TMEM94Q12767 1356 aa8.52□□□□□ -1.05
NEO1-210ENST00000560407 KANK1Q14678 1352 aa8.52□□□□□ -1.05
NEO1-210ENST00000560407 RNF17Q9BXT8 1623 aaKnown RBP8.52□□□□□ -1.05
NEO1-210ENST00000560407 RASEFQ8IZ41 740 aa8.52□□□□□ -1.05
NEO1-210ENST00000560407 SYNMO15061 1565 aa8.52□□□□□ -1.05
NEO1-210ENST00000560407 LRRC9Q6ZRR7 1453 aa8.51□□□□□ -1.05
NEO1-210ENST00000560407 TMEM2Q9UHN6 1383 aa8.51□□□□□ -1.05
NEO1-210ENST00000560407 SLC52A1Q9NWF4 448 aa8.51□□□□□ -1.05
NEO1-210ENST00000560407 POLR1AO95602 1720 aaPredicted RBP8.51□□□□□ -1.05
NEO1-210ENST00000560407 ERVK-7P63135 1459 aa8.51□□□□□ -1.05
NEO1-210ENST00000560407 EHBP1L1Q8N3D4 1523 aa8.5□□□□□ -1.05
NEO1-210ENST00000560407 IQGAP1P46940 1657 aa8.5□□□□□ -1.05
NEO1-210ENST00000560407 RXRBP28702 533 aa8.5□□□□□ -1.05
NEO1-210ENST00000560407 ARHGAP31Q2M1Z3 1444 aa8.5□□□□□ -1.05
NEO1-210ENST00000560407 AMER1Q5JTC6 1135 aaPredicted RBP8.5□□□□□ -1.05
NEO1-210ENST00000560407 C14orf37Q86TY3 774 aa8.49□□□□□ -1.05
NEO1-210ENST00000560407 CADPS2Q86UW7 1296 aa8.49□□□□□ -1.05
NEO1-210ENST00000560407 UPF1Q92900 1129 aaKnown RBP eCLIP8.49□□□□□ -1.05
NEO1-210ENST00000560407 ALKQ9UM73 1620 aa8.48□□□□□ -1.05
NEO1-210ENST00000560407 PPP1R15AO75807 674 aaPredicted RBP8.48□□□□□ -1.05
NEO1-210ENST00000560407 ATF3P18847 181 aa8.48□□□□□ -1.05
NEO1-210ENST00000560407 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.48□□□□□ -1.05
NEO1-210ENST00000560407 SLC26A8Q96RN1 970 aa8.48□□□□□ -1.05
NEO1-210ENST00000560407 CAMSAP2Q08AD1 1489 aa8.48□□□□□ -1.05
NEO1-210ENST00000560407 ARHGAP23Q9P227 1491 aa8.48□□□□□ -1.05
NEO1-210ENST00000560407 ABCC3O15438 1527 aa8.48□□□□□ -1.05
NEO1-210ENST00000560407 SLIT1O75093 1534 aa8.48□□□□□ -1.05
NEO1-210ENST00000560407 NCOA3Q9Y6Q9 1424 aa8.47□□□□□ -1.05
NEO1-210ENST00000560407 NCOA2Q15596 1464 aa8.47□□□□□ -1.05
NEO1-210ENST00000560407 IDI1Q13907 227 aa8.47□□□□□ -1.05
NEO1-210ENST00000560407 C19orf44Q9H6X5 657 aa8.47□□□□□ -1.05
NEO1-210ENST00000560407 TIAM1Q13009 1591 aa8.47□□□□□ -1.05
NEO1-210ENST00000560407 MYOM3Q5VTT5 1437 aa8.46□□□□□ -1.05
NEO1-210ENST00000560407 FGD6Q6ZV73 1430 aa8.46□□□□□ -1.05
NEO1-210ENST00000560407 LRRIQ1Q96JM4 1722 aa8.46□□□□□ -1.05
NEO1-210ENST00000560407 ZNF579Q8NAF0 562 aaKnown RBP8.46□□□□□ -1.06
NEO1-210ENST00000560407 TRIM52Q96A61 297 aa8.46□□□□□ -1.06
NEO1-210ENST00000560407 ARHGEF5Q12774 1597 aa8.46□□□□□ -1.06
NEO1-210ENST00000560407 RRP7BPQ9NSQ0 103 aa8.45□□□□□ -1.06
NEO1-210ENST00000560407 TBX22Q9Y458 520 aa8.45□□□□□ -1.06
NEO1-210ENST00000560407 CCDC61Q9Y6R9 512 aa8.45□□□□□ -1.06
NEO1-210ENST00000560407 NKTRP30414 1462 aaKnown RBP8.45□□□□□ -1.06
NEO1-210ENST00000560407 CHRM1P11229 460 aaPredicted RBP8.44□□□□□ -1.06
NEO1-210ENST00000560407 NGLY1Q96IV0 654 aa8.44□□□□□ -1.06
NEO1-210ENST00000560407 KIF15Q9NS87 1388 aa8.44□□□□□ -1.06
NEO1-210ENST00000560407 PRDM15P57071 1507 aaPredicted RBP8.44□□□□□ -1.06
NEO1-210ENST00000560407 DUOX2Q9NRD8 1548 aa8.44□□□□□ -1.06
NEO1-210ENST00000560407 ZC3H13Q5T200 1668 aaKnown RBP8.43□□□□□ -1.06
NEO1-210ENST00000560407 SGIP1Q9BQI5 828 aa8.43□□□□□ -1.06
NEO1-210ENST00000560407 ERBINQ96RT1 1412 aa8.43□□□□□ -1.06
NEO1-210ENST00000560407 RBM6P78332 1123 aaKnown RBP8.42□□□□□ -1.06
NEO1-210ENST00000560407 LRRC59Q96AG4 307 aaKnown RBP8.42□□□□□ -1.06
NEO1-210ENST00000560407 RBM33Q96EV2 1170 aaKnown RBP8.42□□□□□ -1.06
NEO1-210ENST00000560407 TAOK2Q9UL54 1235 aa8.42□□□□□ -1.06
NEO1-210ENST00000560407 ANKRD30AQ9BXX3 1397 aa8.42□□□□□ -1.06
NEO1-210ENST00000560407 EFCAB6Q5THR3 1501 aa8.41□□□□□ -1.06
NEO1-210ENST00000560407 CDK12Q9NYV4 1490 aaPredicted RBP8.41□□□□□ -1.06
NEO1-210ENST00000560407 NUTM2BA6NNL0 878 aaPredicted RBP8.41□□□□□ -1.06
NEO1-210ENST00000560407 NUTM2EB1AL46 878 aaPredicted RBP8.41□□□□□ -1.06
NEO1-210ENST00000560407 ECM2O94769 699 aaPredicted RBP8.41□□□□□ -1.06
NEO1-210ENST00000560407 NUTM2AQ8IVF1 878 aaPredicted RBP8.41□□□□□ -1.06
NEO1-210ENST00000560407 EIF2AK4Q9P2K8 1649 aaKnown RBP8.4□□□□□ -1.06
NEO1-210ENST00000560407 PIK3R4Q99570 1358 aa8.4□□□□□ -1.06
NEO1-210ENST00000560407 PLEKHG1Q9ULL1 1385 aa8.4□□□□□ -1.06
NEO1-210ENST00000560407 PYGBP11216 843 aa8.4□□□□□ -1.06
NEO1-210ENST00000560407 CCDC125Q86Z20 511 aa8.4□□□□□ -1.06
NEO1-210ENST00000560407 SP7Q8TDD2 431 aaPredicted RBP8.4□□□□□ -1.06
NEO1-210ENST00000560407 QTRT2Q9H974 415 aaKnown RBP8.4□□□□□ -1.06
NEO1-210ENST00000560407 MAST1Q9Y2H9 1570 aa8.39□□□□□ -1.07
NEO1-210ENST00000560407 NUTM2DQ5VT03 806 aaPredicted RBP8.39□□□□□ -1.07
NEO1-210ENST00000560407 ZNF467Q7Z7K2 595 aaPredicted RBP8.39□□□□□ -1.07
NEO1-210ENST00000560407 AFF2P51816 1311 aa8.38□□□□□ -1.07
NEO1-210ENST00000560407 CHGAP10645 457 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms