RNA–Protein interactions for RNA: ENST00000559670.5

LRRC49-218, Transcript of leucine rich repeat containing 49, humanhuman

TSL 4

Gene LRRC49, Length 527 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-218ENST00000559670 TMEM94Q12767 1356 aa12.11□□□□□ -0.47
LRRC49-218ENST00000559670 COL16A1Q07092 1604 aaPredicted RBP12.11□□□□□ -0.47
LRRC49-218ENST00000559670 MAP3K1Q13233 1512 aa12.11□□□□□ -0.47
LRRC49-218ENST00000559670 SETBP1Q9Y6X0 1596 aa12.1□□□□□ -0.47
LRRC49-218ENST00000559670 FGD6Q6ZV73 1430 aa12.1□□□□□ -0.47
LRRC49-218ENST00000559670 WASHC2CQ9Y4E1 1318 aa12.09□□□□□ -0.47
LRRC49-218ENST00000559670 DHX29Q7Z478 1369 aaKnown RBP12.08□□□□□ -0.48
LRRC49-218ENST00000559670 UBR1Q8IWV7 1749 aa12.08□□□□□ -0.48
LRRC49-218ENST00000559670 CCDC18Q5T9S5 1454 aa12.08□□□□□ -0.48
LRRC49-218ENST00000559670 GPATCH8Q9UKJ3 1502 aaKnown RBP12.07□□□□□ -0.48
LRRC49-218ENST00000559670 KIF3BO15066 747 aa12.07□□□□□ -0.48
LRRC49-218ENST00000559670 ARHGAP35Q9NRY4 1499 aa12.07□□□□□ -0.48
LRRC49-218ENST00000559670 SHPRHQ149N8 1683 aa12.06□□□□□ -0.48
LRRC49-218ENST00000559670 RGS12O14924 1447 aa12.06□□□□□ -0.48
LRRC49-218ENST00000559670 PROM2Q8N271 834 aa12.06□□□□□ -0.48
LRRC49-218ENST00000559670 ARHGAP23Q9P227 1491 aa12.06□□□□□ -0.48
LRRC49-218ENST00000559670 TIAM1Q13009 1591 aa12.05□□□□□ -0.48
LRRC49-218ENST00000559670 EEA1Q15075 1411 aa12.05□□□□□ -0.48
LRRC49-218ENST00000559670 SLIT1O75093 1534 aa12.05□□□□□ -0.48
LRRC49-218ENST00000559670 RTEL1-TNFRSF6BF6WH68 1400 aa12.04□□□□□ -0.48
LRRC49-218ENST00000559670 NUTM2BA6NNL0 878 aaPredicted RBP12.04□□□□□ -0.48
LRRC49-218ENST00000559670 NUTM2EB1AL46 878 aaPredicted RBP12.04□□□□□ -0.48
LRRC49-218ENST00000559670 LTKP29376 864 aa12.04□□□□□ -0.48
LRRC49-218ENST00000559670 NUTM2DQ5VT03 806 aaPredicted RBP12.04□□□□□ -0.48
LRRC49-218ENST00000559670 PROSER2Q86WR7 435 aaPredicted RBP12.04□□□□□ -0.48
LRRC49-218ENST00000559670 NUTM2AQ8IVF1 878 aaPredicted RBP12.04□□□□□ -0.48
LRRC49-218ENST00000559670 SLAIN2Q9P270 581 aa12.04□□□□□ -0.48
LRRC49-218ENST00000559670 MSH6P52701 1360 aa12.04□□□□□ -0.48
LRRC49-218ENST00000559670 PRDM15P57071 1507 aaPredicted RBP12.03□□□□□ -0.48
LRRC49-218ENST00000559670 TXNDC2Q86VQ3 553 aa12.03□□□□□ -0.48
LRRC49-218ENST00000559670 CFDP1Q9UEE9 299 aaPredicted RBP12.03□□□□□ -0.48
LRRC49-218ENST00000559670 ATAD2Q6PL18 1390 aa12.03□□□□□ -0.48
LRRC49-218ENST00000559670 ERVK-7P63135 1459 aa12.02□□□□□ -0.48
LRRC49-218ENST00000559670 NCOA2Q15596 1464 aa12.02□□□□□ -0.48
LRRC49-218ENST00000559670 KCNA6P17658 529 aa12.02□□□□□ -0.49
LRRC49-218ENST00000559670 RBM33Q96EV2 1170 aaKnown RBP12.02□□□□□ -0.49
LRRC49-218ENST00000559670 AFF2P51816 1311 aa12.02□□□□□ -0.49
LRRC49-218ENST00000559670 NKTRP30414 1462 aaKnown RBP12.02□□□□□ -0.49
LRRC49-218ENST00000559670 ABCC3O15438 1527 aa12.01□□□□□ -0.49
LRRC49-218ENST00000559670 EID1Q9Y6B2 187 aa12.01□□□□□ -0.49
LRRC49-218ENST00000559670 RBM6P78332 1123 aaKnown RBP12□□□□□ -0.49
LRRC49-218ENST00000559670 AHDC1Q5TGY3 1603 aaPredicted RBP12□□□□□ -0.49
LRRC49-218ENST00000559670 NWD1Q149M9 1564 aa11.99□□□□□ -0.49
LRRC49-218ENST00000559670 KDM5AP29375 1690 aaKnown RBP11.98□□□□□ -0.49
LRRC49-218ENST00000559670 LRP5O75197 1615 aa11.98□□□□□ -0.49
LRRC49-218ENST00000559670 MBD5Q9P267 1494 aa11.98□□□□□ -0.49
LRRC49-218ENST00000559670 CASKIN1Q8WXD9 1431 aa11.98□□□□□ -0.49
LRRC49-218ENST00000559670 CCNB3Q8WWL7 1395 aa11.97□□□□□ -0.49
LRRC49-218ENST00000559670 MNX1P50219 401 aaPredicted RBP11.97□□□□□ -0.49
LRRC49-218ENST00000559670 ZNF579Q8NAF0 562 aaKnown RBP11.97□□□□□ -0.49
LRRC49-218ENST00000559670 QTRT2Q9H974 415 aaKnown RBP11.96□□□□□ -0.49
LRRC49-218ENST00000559670 DIP2AQ14689 1571 aa11.95□□□□□ -0.5
LRRC49-218ENST00000559670 TMEM2Q9UHN6 1383 aa11.94□□□□□ -0.5
LRRC49-218ENST00000559670 CFAP65Q6ZU64 1925 aaKnown RBP11.94□□□□□ -0.5
LRRC49-218ENST00000559670 NGLY1Q96IV0 654 aa11.94□□□□□ -0.5
LRRC49-218ENST00000559670 CAMSAP2Q08AD1 1489 aa11.94□□□□□ -0.5
LRRC49-218ENST00000559670 TET3O43151 1660 aa11.94□□□□□ -0.5
LRRC49-218ENST00000559670 ZNF644Q9H582 1327 aaPredicted RBP11.93□□□□□ -0.5
LRRC49-218ENST00000559670 CLCN6P51797 869 aa11.93□□□□□ -0.5
LRRC49-218ENST00000559670 CCDC125Q86Z20 511 aa11.93□□□□□ -0.5
LRRC49-218ENST00000559670 UBTFP17480 764 aaKnown RBP11.92□□□□□ -0.5
LRRC49-218ENST00000559670 SLC26A8Q96RN1 970 aa11.92□□□□□ -0.5
LRRC49-218ENST00000559670 CCDC141Q6ZP82 1450 aa11.91□□□□□ -0.5
LRRC49-218ENST00000559670 PIK3C2BO00750 1634 aa11.91□□□□□ -0.5
LRRC49-218ENST00000559670 POTEIP0CG38 1075 aa11.91□□□□□ -0.5
LRRC49-218ENST00000559670 C8orf37Q96NL8 207 aa11.91□□□□□ -0.5
LRRC49-218ENST00000559670 FYCO1Q9BQS8 1478 aa11.9□□□□□ -0.5
LRRC49-218ENST00000559670 CEP152O94986 1710 aa11.9□□□□□ -0.5
LRRC49-218ENST00000559670 NCOA3Q9Y6Q9 1424 aa11.89□□□□□ -0.51
LRRC49-218ENST00000559670 EFCAB6Q5THR3 1501 aa11.88□□□□□ -0.51
LRRC49-218ENST00000559670 IFFO2Q5TF58 517 aa11.88□□□□□ -0.51
LRRC49-218ENST00000559670 MROH1Q8NDA8 1641 aa11.87□□□□□ -0.51
LRRC49-218ENST00000559670 EIF2AK4Q9P2K8 1649 aaKnown RBP11.87□□□□□ -0.51
LRRC49-218ENST00000559670 CADPS2Q86UW7 1296 aa11.87□□□□□ -0.51
LRRC49-218ENST00000559670 CHD2O14647 1828 aaKnown RBP11.87□□□□□ -0.51
LRRC49-218ENST00000559670 MAST1Q9Y2H9 1570 aa11.87□□□□□ -0.51
LRRC49-218ENST00000559670 EP400Q96L91 3159 aa11.87□□□□□ -0.51
LRRC49-218ENST00000559670 SETD5Q9C0A6 1442 aa11.86□□□□□ -0.51
LRRC49-218ENST00000559670 NHSL1Q5SYE7 1610 aa11.86□□□□□ -0.51
LRRC49-218ENST00000559670 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.86□□□□□ -0.51
LRRC49-218ENST00000559670 PAK3O75914 559 aaPredicted RBP11.85□□□□□ -0.51
LRRC49-218ENST00000559670 C14orf37Q86TY3 774 aa11.85□□□□□ -0.51
LRRC49-218ENST00000559670 ARHGAP31Q2M1Z3 1444 aa11.85□□□□□ -0.51
LRRC49-218ENST00000559670 ATF3P18847 181 aa11.84□□□□□ -0.51
LRRC49-218ENST00000559670 RSPH4AQ5TD94 716 aa11.84□□□□□ -0.51
LRRC49-218ENST00000559670 BRINP3Q76B58 766 aa11.84□□□□□ -0.51
LRRC49-218ENST00000559670 MTUS2Q5JR59 1369 aa11.83□□□□□ -0.52
LRRC49-218ENST00000559670 GALR2O43603 387 aaPredicted RBP11.82□□□□□ -0.52
LRRC49-218ENST00000559670 YY1P25490 414 aa11.82□□□□□ -0.52
LRRC49-218ENST00000559670 LRRC59Q96AG4 307 aaKnown RBP11.82□□□□□ -0.52
LRRC49-218ENST00000559670 BCANQ96GW7 911 aa11.82□□□□□ -0.52
LRRC49-218ENST00000559670 PHF12Q96QT6 1004 aa11.82□□□□□ -0.52
LRRC49-218ENST00000559670 C19orf44Q9H6X5 657 aa11.82□□□□□ -0.52
LRRC49-218ENST00000559670 TRPC5Q9UL62 973 aaPredicted RBP11.82□□□□□ -0.52
LRRC49-218ENST00000559670 ASXL1Q8IXJ9 1541 aa11.81□□□□□ -0.52
LRRC49-218ENST00000559670 PNPLA6Q8IY17 1366 aa11.81□□□□□ -0.52
LRRC49-218ENST00000559670 BLMP54132 1417 aaPredicted RBP11.81□□□□□ -0.52
LRRC49-218ENST00000559670 LHX8Q68G74 356 aa11.81□□□□□ -0.52
LRRC49-218ENST00000559670 ARHGEF5Q12774 1597 aa11.8□□□□□ -0.52
LRRC49-218ENST00000559670 DCBLD2Q96PD2 775 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms