RNA–Protein interactions for RNA: ENST00000559488.5

ITGB3-201, Transcript of integrin subunit beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGB3, Length 3,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB3-201ENST00000559488 FAM161AQ3B820 660 aa18.32■□□□□ 0.52
ITGB3-201ENST00000559488 PARD3Q8TEW0 1356 aa18.32■□□□□ 0.52
ITGB3-201ENST00000559488 SLKQ9H2G2 1235 aaPredicted RBP18.32■□□□□ 0.52
ITGB3-201ENST00000559488 MLECQ14165 292 aa18.3■□□□□ 0.52
ITGB3-201ENST00000559488 HSP90AA1P07900 732 aaKnown RBP18.3■□□□□ 0.52
ITGB3-201ENST00000559488 LRPPRCP42704 1394 aaKnown RBP18.28■□□□□ 0.52
ITGB3-201ENST00000559488 SHANK2Q9UPX8 1470 aa18.28■□□□□ 0.52
ITGB3-201ENST00000559488 ARHGEF12Q9NZN5 1544 aa18.28■□□□□ 0.52
ITGB3-201ENST00000559488 ADGRF5Q8IZF2 1346 aa18.28■□□□□ 0.52
ITGB3-201ENST00000559488 MTHFSP49914 203 aa18.27■□□□□ 0.52
ITGB3-201ENST00000559488 STAC3Q96MF2 364 aa18.26■□□□□ 0.51
ITGB3-201ENST00000559488 DUSP27Q5VZP5 1158 aa18.26■□□□□ 0.51
ITGB3-201ENST00000559488 RNF123Q5XPI4 1314 aa18.26■□□□□ 0.51
ITGB3-201ENST00000559488 BCORL1Q5H9F3 1711 aa18.26■□□□□ 0.51
ITGB3-201ENST00000559488 ABCC10Q5T3U5 1492 aa18.26■□□□□ 0.51
ITGB3-201ENST00000559488 TCP11L2Q8N4U5 519 aa18.25■□□□□ 0.51
ITGB3-201ENST00000559488 A2MP01023 1474 aa18.25■□□□□ 0.51
ITGB3-201ENST00000559488 CABP2Q9NPB3 220 aa18.25■□□□□ 0.51
ITGB3-201ENST00000559488 SMC4Q9NTJ3 1288 aa18.25■□□□□ 0.51
ITGB3-201ENST00000559488 ADGBQ8N7X0 1667 aa18.25■□□□□ 0.51
ITGB3-201ENST00000559488 KDM5CP41229 1560 aa18.25■□□□□ 0.51
ITGB3-201ENST00000559488 SLFN5Q08AF3 891 aa18.24■□□□□ 0.51
ITGB3-201ENST00000559488 AMER1Q5JTC6 1135 aaPredicted RBP18.24■□□□□ 0.51
ITGB3-201ENST00000559488 ITPRIPQ8IWB1 547 aa18.24■□□□□ 0.51
ITGB3-201ENST00000559488 MYH16Q9H6N6 1097 aa18.24■□□□□ 0.51
ITGB3-201ENST00000559488 CGNL1Q0VF96 1302 aa18.24■□□□□ 0.51
ITGB3-201ENST00000559488 MINK1Q8N4C8 1332 aaPredicted RBP18.24■□□□□ 0.51
ITGB3-201ENST00000559488 MBD5Q9P267 1494 aa18.24■□□□□ 0.51
ITGB3-201ENST00000559488 TRAPPC8Q9Y2L5 1435 aa18.24■□□□□ 0.51
ITGB3-201ENST00000559488 EIF5BO60841 1220 aaKnown RBP18.23■□□□□ 0.51
ITGB3-201ENST00000559488 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.22■□□□□ 0.51
ITGB3-201ENST00000559488 GGNBP2Q9H3C7 697 aa18.22■□□□□ 0.51
ITGB3-201ENST00000559488 RUNDC1Q96C34 613 aa18.22■□□□□ 0.51
ITGB3-201ENST00000559488 RWDD1Q9H446 243 aaPredicted RBP18.21■□□□□ 0.51
ITGB3-201ENST00000559488 EVC2Q86UK5 1308 aa18.2■□□□□ 0.5
ITGB3-201ENST00000559488 VGFO15240 615 aaPredicted RBP18.2■□□□□ 0.5
ITGB3-201ENST00000559488 PMFBP1Q8TBY8 1022 aa18.2■□□□□ 0.5
ITGB3-201ENST00000559488 SOX12O15370 315 aa18.19■□□□□ 0.5
ITGB3-201ENST00000559488 PLEKHH1Q9ULM0 1364 aa18.18■□□□□ 0.5
ITGB3-201ENST00000559488 HDGFL2Q7Z4V5 671 aaPredicted RBP18.18■□□□□ 0.5
ITGB3-201ENST00000559488 PLCH2O75038 1416 aa18.17■□□□□ 0.5
ITGB3-201ENST00000559488 COL17A1Q9UMD9 1497 aaPredicted RBP18.17■□□□□ 0.5
ITGB3-201ENST00000559488 ELL2O00472 640 aaPredicted RBP18.16■□□□□ 0.5
ITGB3-201ENST00000559488 RAPGEF3O95398 923 aa18.16■□□□□ 0.5
ITGB3-201ENST00000559488 MFAP1P55081 439 aaKnown RBP18.16■□□□□ 0.5
ITGB3-201ENST00000559488 NFKBIBQ15653 356 aa18.16■□□□□ 0.5
ITGB3-201ENST00000559488 WWC1Q8IX03 1113 aa18.16■□□□□ 0.5
ITGB3-201ENST00000559488 USP35Q9P2H5 1018 aa18.16■□□□□ 0.5
ITGB3-201ENST00000559488 ABCA8O94911 1581 aa18.16■□□□□ 0.5
ITGB3-201ENST00000559488 TERF2IPQ9NYB0 399 aa18.16■□□□□ 0.5
ITGB3-201ENST00000559488 SCAF11Q99590 1463 aaKnown RBP18.16■□□□□ 0.5
ITGB3-201ENST00000559488 SPINK5Q9NQ38 1064 aaPredicted RBP18.15■□□□□ 0.5
ITGB3-201ENST00000559488 TSR2Q969E8 191 aaKnown RBP18.14■□□□□ 0.49
ITGB3-201ENST00000559488 DUOX2Q9NRD8 1548 aa18.14■□□□□ 0.49
ITGB3-201ENST00000559488 CDC42BPAQ5VT25 1732 aa18.13■□□□□ 0.49
ITGB3-201ENST00000559488 ZKSCAN2Q63HK3 967 aa18.13■□□□□ 0.49
ITGB3-201ENST00000559488 NSD3Q9BZ95 1437 aa18.13■□□□□ 0.49
ITGB3-201ENST00000559488 SAMD9LQ8IVG5 1584 aa18.12■□□□□ 0.49
ITGB3-201ENST00000559488 PLEKHG5O94827 1062 aa18.11■□□□□ 0.49
ITGB3-201ENST00000559488 CARD14Q9BXL6 1004 aa18.11■□□□□ 0.49
ITGB3-201ENST00000559488 NGEFQ8N5V2 710 aa18.11■□□□□ 0.49
ITGB3-201ENST00000559488 PLA2R1Q13018 1463 aa18.11■□□□□ 0.49
ITGB3-201ENST00000559488 GPRASP1Q5JY77 1395 aa18.11■□□□□ 0.49
ITGB3-201ENST00000559488 GSE1Q14687 1217 aa18.11■□□□□ 0.49
ITGB3-201ENST00000559488 RIPK4P57078 832 aa18.1■□□□□ 0.49
ITGB3-201ENST00000559488 GZF1Q9H116 711 aaPredicted RBP18.1■□□□□ 0.49
ITGB3-201ENST00000559488 ADGRL1O94910 1474 aa18.1■□□□□ 0.49
ITGB3-201ENST00000559488 NUTM2FA1L443 756 aa18.09■□□□□ 0.49
ITGB3-201ENST00000559488 PDE3AQ14432 1141 aa18.09■□□□□ 0.49
ITGB3-201ENST00000559488 DZIP1LQ8IYY4 767 aaKnown RBP18.09■□□□□ 0.49
ITGB3-201ENST00000559488 PNNQ9H307 717 aaKnown RBP18.09■□□□□ 0.49
ITGB3-201ENST00000559488 FANCAO15360 1455 aa18.09■□□□□ 0.49
ITGB3-201ENST00000559488 OSCARQ8IYS5 282 aa18.09■□□□□ 0.49
ITGB3-201ENST00000559488 IPO8O15397 1037 aaKnown RBP18.08■□□□□ 0.49
ITGB3-201ENST00000559488 FRAT2O75474 233 aaPredicted RBP18.08■□□□□ 0.48
ITGB3-201ENST00000559488 IGHDP01880 384 aa18.08■□□□□ 0.48
ITGB3-201ENST00000559488 DMRT2Q9Y5R5 561 aa18.08■□□□□ 0.48
ITGB3-201ENST00000559488 APBB1O00213 710 aa18.07■□□□□ 0.48
ITGB3-201ENST00000559488 EXOSC9Q06265 439 aaKnown RBP18.07■□□□□ 0.48
ITGB3-201ENST00000559488 IL27Q8NEV9 243 aa18.07■□□□□ 0.48
ITGB3-201ENST00000559488 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.07■□□□□ 0.48
ITGB3-201ENST00000559488 NOS1P29475 1434 aa18.07■□□□□ 0.48
ITGB3-201ENST00000559488 ARHGEF5Q12774 1597 aa18.07■□□□□ 0.48
ITGB3-201ENST00000559488 CYB5RLQ6IPT4 315 aa18.06■□□□□ 0.48
ITGB3-201ENST00000559488 PDZRN3Q9UPQ7 1066 aa18.06■□□□□ 0.48
ITGB3-201ENST00000559488 NKTRP30414 1462 aaKnown RBP18.06■□□□□ 0.48
ITGB3-201ENST00000559488 HMOX1P09601 288 aa18.06■□□□□ 0.48
ITGB3-201ENST00000559488 DIAPH1O60610 1272 aaKnown RBP18.05■□□□□ 0.48
ITGB3-201ENST00000559488 PRAM1Q96QH2 718 aa18.05■□□□□ 0.48
ITGB3-201ENST00000559488 ASXL1Q8IXJ9 1541 aa18.05■□□□□ 0.48
ITGB3-201ENST00000559488 KDM5DQ9BY66 1539 aa18.04■□□□□ 0.48
ITGB3-201ENST00000559488 HSCBQ8IWL3 235 aa18.04■□□□□ 0.48
ITGB3-201ENST00000559488 MAGI2Q86UL8 1455 aa18.04■□□□□ 0.48
ITGB3-201ENST00000559488 TTC37Q6PGP7 1564 aa18.03■□□□□ 0.48
ITGB3-201ENST00000559488 RARSP54136 660 aaKnown RBP18.03■□□□□ 0.48
ITGB3-201ENST00000559488 TNNQ9UQP3 1299 aa18.03■□□□□ 0.48
ITGB3-201ENST00000559488 ABCC2Q92887 1545 aa18.03■□□□□ 0.48
ITGB3-201ENST00000559488 HSP90AB1P08238 724 aaKnown RBP18.03■□□□□ 0.48
ITGB3-201ENST00000559488 ADCY10Q96PN6 1610 aa18.01■□□□□ 0.47
ITGB3-201ENST00000559488 EIF2AK4Q9P2K8 1649 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms