RNA–Protein interactions for RNA: ENST00000559396.5

DCAF11-222, Transcript of DDB1 and CUL4 associated factor 11, human

TSL 3

Gene DCAF11, Length 300 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCAF11-222	ENST00000559396	UGGT1	Q9NYU2	1555 aa		5.98	□□□□□ -1.45
DCAF11-222	ENST00000559396	MLH3	Q9UHC1	1453 aa		5.98	□□□□□ -1.45
DCAF11-222	ENST00000559396	RRP9	O43818	475 aa	Known RBP	5.98	□□□□□ -1.45
DCAF11-222	ENST00000559396	TRH	P20396	242 aa	Predicted RBP	5.98	□□□□□ -1.45
DCAF11-222	ENST00000559396	CDK11B	P21127	795 aa	Known RBP	5.98	□□□□□ -1.45
DCAF11-222	ENST00000559396	C14orf37	Q86TY3	774 aa		5.98	□□□□□ -1.45
DCAF11-222	ENST00000559396	LMTK2	Q8IWU2	1503 aa		5.98	□□□□□ -1.45
DCAF11-222	ENST00000559396	PIK3C2B	O00750	1634 aa		5.97	□□□□□ -1.45
DCAF11-222	ENST00000559396	HMGB1	P09429	215 aa	Known RBP	5.97	□□□□□ -1.45
DCAF11-222	ENST00000559396	AFAP1	Q8N556	730 aa		5.97	□□□□□ -1.45
DCAF11-222	ENST00000559396	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	5.97	□□□□□ -1.45	9e-18	■■□□□ 13.4
DCAF11-222	ENST00000559396	ABCC3	O15438	1527 aa		5.97	□□□□□ -1.45
DCAF11-222	ENST00000559396	CCDC144A	A2RUR9	1427 aa		5.97	□□□□□ -1.45
DCAF11-222	ENST00000559396	RERE	Q9P2R6	1566 aa		5.97	□□□□□ -1.45
DCAF11-222	ENST00000559396	PLA2R1	Q13018	1463 aa		5.96	□□□□□ -1.45
DCAF11-222	ENST00000559396	CYB5RL	Q6IPT4	315 aa		5.96	□□□□□ -1.46
DCAF11-222	ENST00000559396	L3MBTL2	Q969R5	705 aa		5.96	□□□□□ -1.46
DCAF11-222	ENST00000559396	HIRIP3	Q9BW71	556 aa	Predicted RBP	5.96	□□□□□ -1.46
DCAF11-222	ENST00000559396	CHMP4A	Q9BY43	222 aa		5.96	□□□□□ -1.46
DCAF11-222	ENST00000559396	UHRF1BP1	Q6BDS2	1440 aa		5.96	□□□□□ -1.46
DCAF11-222	ENST00000559396	SYNM	O15061	1565 aa		5.96	□□□□□ -1.46
DCAF11-222	ENST00000559396	NEURL4	Q96JN8	1562 aa		5.96	□□□□□ -1.46
DCAF11-222	ENST00000559396	KANK1	Q14678	1352 aa		5.95	□□□□□ -1.46
DCAF11-222	ENST00000559396	ADGRB3	O60242	1522 aa		5.95	□□□□□ -1.46
DCAF11-222	ENST00000559396	MSH5	O43196	834 aa		5.95	□□□□□ -1.46
DCAF11-222	ENST00000559396	MIER1	Q8N108	512 aa		5.95	□□□□□ -1.46
DCAF11-222	ENST00000559396	CNKSR2	Q8WXI2	1034 aa		5.95	□□□□□ -1.46
DCAF11-222	ENST00000559396	USP35	Q9P2H5	1018 aa		5.95	□□□□□ -1.46
DCAF11-222	ENST00000559396	TAOK2	Q9UL54	1235 aa		5.95	□□□□□ -1.46
DCAF11-222	ENST00000559396	KDM5A	P29375	1690 aa	Known RBP	5.94	□□□□□ -1.46
DCAF11-222	ENST00000559396	MYOM1	P52179	1685 aa		5.94	□□□□□ -1.46
DCAF11-222	ENST00000559396	QRICH2	Q9H0J4	1663 aa		5.94	□□□□□ -1.46
DCAF11-222	ENST00000559396	DHX29	Q7Z478	1369 aa	Known RBP	5.94	□□□□□ -1.46
DCAF11-222	ENST00000559396	FER1L4	A9Z1Z3	1794 aa		5.94	□□□□□ -1.46
DCAF11-222	ENST00000559396	MYO3A	Q8NEV4	1616 aa		5.94	□□□□□ -1.46
DCAF11-222	ENST00000559396	PRAG1	Q86YV5	1406 aa		5.93	□□□□□ -1.46
DCAF11-222	ENST00000559396	YEATS2	Q9ULM3	1422 aa		5.93	□□□□□ -1.46
DCAF11-222	ENST00000559396	HSPA5	P11021	654 aa	Known RBP	5.93	□□□□□ -1.46
DCAF11-222	ENST00000559396	NBPF8	Q3BBV2	869 aa		5.93	□□□□□ -1.46
DCAF11-222	ENST00000559396	ARHGEF28	Q8N1W1	1705 aa	Known RBP	5.93	□□□□□ -1.46
DCAF11-222	ENST00000559396	PTPRT	O14522	1441 aa		5.92	□□□□□ -1.46
DCAF11-222	ENST00000559396	CNTLN	Q9NXG0	1405 aa		5.92	□□□□□ -1.46
DCAF11-222	ENST00000559396	KIF3B	O15066	747 aa		5.92	□□□□□ -1.46
DCAF11-222	ENST00000559396	IPO4	Q8TEX9	1081 aa	Known RBP	5.92	□□□□□ -1.46
DCAF11-222	ENST00000559396	BCAN	Q96GW7	911 aa		5.92	□□□□□ -1.46
DCAF11-222	ENST00000559396	ARID3A	Q99856	593 aa		5.92	□□□□□ -1.46
DCAF11-222	ENST00000559396	USP47	Q96K76	1375 aa		5.92	□□□□□ -1.46
DCAF11-222	ENST00000559396	SPATA31E1	Q6ZUB1	1445 aa		5.91	□□□□□ -1.46
DCAF11-222	ENST00000559396	HSP90AA2P	Q14568	343 aa	Predicted RBP	5.91	□□□□□ -1.46
DCAF11-222	ENST00000559396	FAM43A	Q8N2R8	423 aa		5.91	□□□□□ -1.46
DCAF11-222	ENST00000559396	IL27	Q8NEV9	243 aa		5.91	□□□□□ -1.46
DCAF11-222	ENST00000559396	NOP58	Q9Y2X3	529 aa	Known RBP	5.91	□□□□□ -1.46
DCAF11-222	ENST00000559396	ARID4B	Q4LE39	1312 aa	Predicted RBP	5.91	□□□□□ -1.46
DCAF11-222	ENST00000559396	TMEM131L	A2VDJ0	1609 aa		5.91	□□□□□ -1.46
DCAF11-222	ENST00000559396	MYOM2	P54296	1465 aa		5.9	□□□□□ -1.46
DCAF11-222	ENST00000559396	AGL	P35573	1532 aa		5.9	□□□□□ -1.46
DCAF11-222	ENST00000559396	NEXMIF	Q5QGS0	1516 aa		5.9	□□□□□ -1.46
DCAF11-222	ENST00000559396	EIF4G2	P78344	907 aa	Known RBP eCLIP	5.9	□□□□□ -1.46
DCAF11-222	ENST00000559396	FAM69C	Q0P6D2	419 aa		5.9	□□□□□ -1.46
DCAF11-222	ENST00000559396	DDX10	Q13206	875 aa	Known RBP	5.9	□□□□□ -1.46
DCAF11-222	ENST00000559396	CNGB1	Q14028	1251 aa	Predicted RBP	5.9	□□□□□ -1.46
DCAF11-222	ENST00000559396	SETD1A	O15047	1707 aa	Known RBP	5.9	□□□□□ -1.47
DCAF11-222	ENST00000559396	CCDC7	Q96M83	1385 aa		5.9	□□□□□ -1.47
DCAF11-222	ENST00000559396	NPAT	Q14207	1427 aa		5.9	□□□□□ -1.47
DCAF11-222	ENST00000559396	C3	P01024	1663 aa		5.89	□□□□□ -1.47
DCAF11-222	ENST00000559396	RAPGEF3	O95398	923 aa		5.89	□□□□□ -1.47
DCAF11-222	ENST00000559396	CALD1	Q05682	793 aa	Known RBP	5.89	□□□□□ -1.47
DCAF11-222	ENST00000559396	NAP1L2	Q9ULW6	460 aa	Predicted RBP	5.89	□□□□□ -1.47
DCAF11-222	ENST00000559396	KDM2A	Q9Y2K7	1162 aa		5.89	□□□□□ -1.47
DCAF11-222	ENST00000559396	CENPJ	Q9HC77	1338 aa	Predicted RBP	5.89	□□□□□ -1.47
DCAF11-222	ENST00000559396	ROCK2	O75116	1388 aa	Known RBP	5.89	□□□□□ -1.47
DCAF11-222	ENST00000559396	COL17A1	Q9UMD9	1497 aa	Predicted RBP	5.89	□□□□□ -1.47
DCAF11-222	ENST00000559396	SETBP1	Q9Y6X0	1596 aa		5.89	□□□□□ -1.47
DCAF11-222	ENST00000559396	CANX	P27824	592 aa	Known RBP	5.88	□□□□□ -1.47
DCAF11-222	ENST00000559396	HAP1	P54257	671 aa	Predicted RBP	5.88	□□□□□ -1.47
DCAF11-222	ENST00000559396	SAMD1	Q6SPF0	538 aa	Predicted RBP	5.88	□□□□□ -1.47
DCAF11-222	ENST00000559396	DCAF11	Q8TEB1	546 aa		5.88	□□□□□ -1.47
DCAF11-222	ENST00000559396	WASHC2A	Q641Q2	1341 aa		5.88	□□□□□ -1.47
DCAF11-222	ENST00000559396	UBR1	Q8IWV7	1749 aa		5.88	□□□□□ -1.47
DCAF11-222	ENST00000559396	HSP90AA1	P07900	732 aa	Known RBP	5.87	□□□□□ -1.47
DCAF11-222	ENST00000559396	RGL3	Q3MIN7	710 aa		5.87	□□□□□ -1.47
DCAF11-222	ENST00000559396	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	5.87	□□□□□ -1.47
DCAF11-222	ENST00000559396	TEX2	Q8IWB9	1127 aa		5.87	□□□□□ -1.47
DCAF11-222	ENST00000559396	ANP32B	Q92688	251 aa	Known RBP	5.87	□□□□□ -1.47
DCAF11-222	ENST00000559396	WASHC2C	Q9Y4E1	1318 aa		5.87	□□□□□ -1.47
DCAF11-222	ENST00000559396	ERVK-7	P63135	1459 aa		5.87	□□□□□ -1.47
DCAF11-222	ENST00000559396	SPATA31D1	Q6ZQQ2	1576 aa		5.87	□□□□□ -1.47
DCAF11-222	ENST00000559396	RIMS1	Q86UR5	1692 aa	Known RBP	5.87	□□□□□ -1.47
DCAF11-222	ENST00000559396	KNDC1	Q76NI1	1749 aa		5.87	□□□□□ -1.47
DCAF11-222	ENST00000559396	ANKRD26	Q9UPS8	1709 aa		5.86	□□□□□ -1.47
DCAF11-222	ENST00000559396	NOS1	P29475	1434 aa		5.86	□□□□□ -1.47
DCAF11-222	ENST00000559396	GPRASP1	Q5JY77	1395 aa		5.86	□□□□□ -1.47
DCAF11-222	ENST00000559396	KIF7	Q2M1P5	1343 aa		5.86	□□□□□ -1.47
DCAF11-222	ENST00000559396	PPM1G	O15355	546 aa	Predicted RBP	5.86	□□□□□ -1.47
DCAF11-222	ENST00000559396	GGT6	Q6P531	493 aa		5.86	□□□□□ -1.47
DCAF11-222	ENST00000559396	DHX37	Q8IY37	1157 aa	Known RBP	5.86	□□□□□ -1.47
DCAF11-222	ENST00000559396	KIF20B	Q96Q89	1820 aa		5.85	□□□□□ -1.47
DCAF11-222	ENST00000559396	ASXL1	Q8IXJ9	1541 aa		5.85	□□□□□ -1.47
DCAF11-222	ENST00000559396	NRXN1	Q9ULB1	1477 aa		5.85	□□□□□ -1.47
DCAF11-222	ENST00000559396	VGF	O15240	615 aa	Predicted RBP	5.85	□□□□□ -1.47

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