RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, human

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GABPB1-209	ENST00000559100	KCNK17	Q96T54	332 aa		4.22	□□□□□ -1.73
GABPB1-209	ENST00000559100	EVI5	O60447	810 aa		4.21	□□□□□ -1.74
GABPB1-209	ENST00000559100	UBTF	P17480	764 aa	Known RBP	4.21	□□□□□ -1.74
GABPB1-209	ENST00000559100	FECH	P22830	423 aa		4.21	□□□□□ -1.74
GABPB1-209	ENST00000559100	AMHR2	Q16671	573 aa		4.21	□□□□□ -1.74
GABPB1-209	ENST00000559100	KCNH8	Q96L42	1107 aa		4.21	□□□□□ -1.74
GABPB1-209	ENST00000559100	PLEKHG3	A1L390	1219 aa		4.2	□□□□□ -1.74
GABPB1-209	ENST00000559100	BHMG1	C9JSJ3	638 aa	Predicted RBP	4.2	□□□□□ -1.74
GABPB1-209	ENST00000559100	FLII	Q13045	1269 aa		4.2	□□□□□ -1.74
GABPB1-209	ENST00000559100	PCMTD1	Q96MG8	357 aa	Predicted RBP	4.2	□□□□□ -1.74
GABPB1-209	ENST00000559100	PCDHGA4	Q9Y5G9	962 aa		4.2	□□□□□ -1.74
GABPB1-209	ENST00000559100	ARID3C	A6NKF2	412 aa		4.19	□□□□□ -1.74
GABPB1-209	ENST00000559100	KIF3C	O14782	793 aa		4.19	□□□□□ -1.74
GABPB1-209	ENST00000559100	KCNMA1	Q12791	1236 aa		4.19	□□□□□ -1.74
GABPB1-209	ENST00000559100	GIGYF2	Q6Y7W6	1299 aa	Known RBP	4.19	□□□□□ -1.74
GABPB1-209	ENST00000559100	OXER1	Q8TDS5	423 aa		4.19	□□□□□ -1.74
GABPB1-209	ENST00000559100	PODXL2	Q9NZ53	605 aa		4.19	□□□□□ -1.74
GABPB1-209	ENST00000559100	C11orf95	C9JLR9	678 aa	Predicted RBP	4.18	□□□□□ -1.74
GABPB1-209	ENST00000559100	APBB1	O00213	710 aa		4.18	□□□□□ -1.74
GABPB1-209	ENST00000559100	MAP3K7	O43318	606 aa		4.18	□□□□□ -1.74
GABPB1-209	ENST00000559100	GSK3A	P49840	483 aa		4.18	□□□□□ -1.74
GABPB1-209	ENST00000559100	PTGDR	Q13258	359 aa		4.18	□□□□□ -1.74
GABPB1-209	ENST00000559100	LCE1D	Q5T752	114 aa		4.18	□□□□□ -1.74
GABPB1-209	ENST00000559100	RBM33	Q96EV2	1170 aa	Known RBP	4.18	□□□□□ -1.74
GABPB1-209	ENST00000559100	KRTAP4-2	Q9BYR5	136 aa		4.18	□□□□□ -1.74
GABPB1-209	ENST00000559100	AAAS	Q9NRG9	546 aa		4.18	□□□□□ -1.74
GABPB1-209	ENST00000559100	TERT	O14746	1132 aa	Known RBP	4.17	□□□□□ -1.74
GABPB1-209	ENST00000559100	TMEM151A	Q8N4L1	468 aa		4.17	□□□□□ -1.74
GABPB1-209	ENST00000559100	FAM187A	A6NFU0	413 aa		4.16	□□□□□ -1.74
GABPB1-209	ENST00000559100	MS4A1	P11836	297 aa		4.16	□□□□□ -1.74
GABPB1-209	ENST00000559100	CLCN1	P35523	988 aa		4.16	□□□□□ -1.74
GABPB1-209	ENST00000559100	PRIM1	P49642	420 aa	Known RBP	4.16	□□□□□ -1.74
GABPB1-209	ENST00000559100	MDM2	Q00987	491 aa	Predicted RBP	4.16	□□□□□ -1.74
GABPB1-209	ENST00000559100	PPP4R3B	Q5MIZ7	849 aa		4.16	□□□□□ -1.74
GABPB1-209	ENST00000559100	TRIM67	Q6ZTA4	783 aa		4.16	□□□□□ -1.74
GABPB1-209	ENST00000559100	NYAP1	Q6ZVC0	841 aa		4.16	□□□□□ -1.74
GABPB1-209	ENST00000559100	CDHR5	Q9HBB8	845 aa		4.15	□□□□□ -1.75
GABPB1-209	ENST00000559100	GOPC	Q9HD26	462 aa		4.15	□□□□□ -1.75
GABPB1-209	ENST00000559100	RAD21	O60216	631 aa		4.14	□□□□□ -1.75
GABPB1-209	ENST00000559100	GDF11	O95390	407 aa		4.14	□□□□□ -1.75
GABPB1-209	ENST00000559100	BCAM	P50895	628 aa		4.14	□□□□□ -1.75
GABPB1-209	ENST00000559100	EN1	Q05925	392 aa	Predicted RBP	4.14	□□□□□ -1.75
GABPB1-209	ENST00000559100	ANKK1	Q8NFD2	765 aa		4.14	□□□□□ -1.75
GABPB1-209	ENST00000559100	CLUAP1	Q96AJ1	413 aa		4.14	□□□□□ -1.75
GABPB1-209	ENST00000559100	EPAS1	Q99814	870 aa		4.14	□□□□□ -1.75
GABPB1-209	ENST00000559100	C1orf115	Q9H7X2	142 aa		4.14	□□□□□ -1.75
GABPB1-209	ENST00000559100	GPCPD1	Q9NPB8	672 aa		4.14	□□□□□ -1.75
GABPB1-209	ENST00000559100	GMPR2	Q9P2T1	348 aa	Known RBP	4.14	□□□□□ -1.75
GABPB1-209	ENST00000559100	PHF14	O94880	888 aa		4.13	□□□□□ -1.75
GABPB1-209	ENST00000559100	SSTR3	P32745	418 aa	Predicted RBP	4.13	□□□□□ -1.75
GABPB1-209	ENST00000559100	RANGAP1	P46060	587 aa	Predicted RBP	4.13	□□□□□ -1.75
GABPB1-209	ENST00000559100	SH3D19	Q5HYK7	790 aa		4.13	□□□□□ -1.75
GABPB1-209	ENST00000559100	KRTAP5-3	Q6L8H2	238 aa		4.13	□□□□□ -1.75
GABPB1-209	ENST00000559100	PPP1R18	Q6NYC8	613 aa		4.13	□□□□□ -1.75
GABPB1-209	ENST00000559100	BEGAIN	Q9BUH8	593 aa		4.13	□□□□□ -1.75
GABPB1-209	ENST00000559100	SLC4A5	Q9BY07	1137 aa		4.13	□□□□□ -1.75
GABPB1-209	ENST00000559100	KRTAP4-9	Q9BYQ8	210 aa		4.13	□□□□□ -1.75
GABPB1-209	ENST00000559100	POLR3E	Q9NVU0	708 aa		4.13	□□□□□ -1.75
GABPB1-209	ENST00000559100	TRAK2	O60296	914 aa		4.12	□□□□□ -1.75
GABPB1-209	ENST00000559100	TSR1	Q2NL82	804 aa	Known RBP	4.12	□□□□□ -1.75
GABPB1-209	ENST00000559100	FAM161A	Q3B820	660 aa		4.12	□□□□□ -1.75
GABPB1-209	ENST00000559100	GPAT2	Q6NUI2	795 aa		4.12	□□□□□ -1.75
GABPB1-209	ENST00000559100	PTCD2	Q8WV60	388 aa	Known RBP	4.12	□□□□□ -1.75
GABPB1-209	ENST00000559100	REPIN1	Q9BWE0	567 aa	Known RBP	4.12	□□□□□ -1.75
GABPB1-209	ENST00000559100	NBPF3	Q9H094	633 aa		4.12	□□□□□ -1.75
GABPB1-209	ENST00000559100	OAT	P04181	439 aa		4.11	□□□□□ -1.75
GABPB1-209	ENST00000559100	PDIA4	P13667	645 aa	Known RBP	4.11	□□□□□ -1.75
GABPB1-209	ENST00000559100	TRIM26	Q12899	539 aa	Predicted RBP	4.11	□□□□□ -1.75
GABPB1-209	ENST00000559100	MCM6	Q14566	821 aa		4.11	□□□□□ -1.75
GABPB1-209	ENST00000559100	SKIV2L	Q15477	1246 aa	Known RBP	4.11	□□□□□ -1.75
GABPB1-209	ENST00000559100	TYW1B	Q6NUM6	668 aa		4.11	□□□□□ -1.75
GABPB1-209	ENST00000559100		Q8N3U1	123 aa		4.11	□□□□□ -1.75
GABPB1-209	ENST00000559100	CCDC82	Q8N4S0	544 aa		4.11	□□□□□ -1.75
GABPB1-209	ENST00000559100	NLRP7	Q8WX94	980 aa		4.11	□□□□□ -1.75
GABPB1-209	ENST00000559100	FBXW7	Q969H0	707 aa		4.11	□□□□□ -1.75
GABPB1-209	ENST00000559100	PHOX2B	Q99453	314 aa		4.11	□□□□□ -1.75
GABPB1-209	ENST00000559100		A6NJR5	290 aa		4.1	□□□□□ -1.75
GABPB1-209	ENST00000559100	GMPR	P36959	345 aa		4.1	□□□□□ -1.75
GABPB1-209	ENST00000559100	PADI6	Q6TGC4	694 aa		4.1	□□□□□ -1.75
GABPB1-209	ENST00000559100	PROSER2	Q86WR7	435 aa	Predicted RBP	4.1	□□□□□ -1.75
GABPB1-209	ENST00000559100	CCDC97	Q96F63	343 aa	Predicted RBP	4.1	□□□□□ -1.75
GABPB1-209	ENST00000559100	KRTAP9-8	Q9BYQ0	159 aa		4.1	□□□□□ -1.75
GABPB1-209	ENST00000559100	NPDC1	Q9NQX5	325 aa	Predicted RBP	4.1	□□□□□ -1.75
GABPB1-209	ENST00000559100	WBP1L	Q9NX94	342 aa		4.1	□□□□□ -1.75
GABPB1-209	ENST00000559100	DACH1	Q9UI36	760 aa		4.1	□□□□□ -1.75
GABPB1-209	ENST00000559100	ZNF777	Q9ULD5	760 aa	Predicted RBP	4.1	□□□□□ -1.75
GABPB1-209	ENST00000559100	PCDHGA10	Q9Y5H3	936 aa		4.1	□□□□□ -1.75
GABPB1-209	ENST00000559100	ZBTB7C	A1YPR0	619 aa		4.09	□□□□□ -1.75
GABPB1-209	ENST00000559100	ONECUT3	O60422	494 aa	Predicted RBP	4.09	□□□□□ -1.75
GABPB1-209	ENST00000559100	SLC34A2	O95436	690 aa		4.09	□□□□□ -1.75
GABPB1-209	ENST00000559100	RASSF7	Q02833	373 aa		4.09	□□□□□ -1.75
GABPB1-209	ENST00000559100	METTL3	Q86U44	580 aa	Known RBP	4.09	□□□□□ -1.75
GABPB1-209	ENST00000559100	PROCA1	Q8NCQ7	364 aa	Predicted RBP	4.09	□□□□□ -1.75
GABPB1-209	ENST00000559100	FAM217B	Q9NTX9	383 aa	Predicted RBP	4.09	□□□□□ -1.75
GABPB1-209	ENST00000559100	ADAM23	O75077	832 aa		4.08	□□□□□ -1.76
GABPB1-209	ENST00000559100	IGHA1	P01876	353 aa		4.08	□□□□□ -1.76
GABPB1-209	ENST00000559100	CLK2	P49760	499 aa	Known RBP	4.08	□□□□□ -1.76
GABPB1-209	ENST00000559100	KRTAP19-1	Q8IUB9	90 aa		4.08	□□□□□ -1.76
GABPB1-209	ENST00000559100	ZNF454	Q8N9F8	522 aa		4.08	□□□□□ -1.76
GABPB1-209	ENST00000559100	CERK	Q8TCT0	537 aa		4.08	□□□□□ -1.76

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