RNA–Protein interactions for RNA: ENST00000558953.1

MARK3-216, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-216ENST00000558953 ATP1B4Q9UN42 357 aaPredicted RBP10.04□□□□□ -0.8
MARK3-216ENST00000558953 FRMPD1Q5SYB0 1578 aa10.04□□□□□ -0.8
MARK3-216ENST00000558953 TTC37Q6PGP7 1564 aa10.04□□□□□ -0.8
MARK3-216ENST00000558953 AKNAQ7Z591 1439 aa10.03□□□□□ -0.8
MARK3-216ENST00000558953 CDK11AQ9UQ88 783 aaPredicted RBP10.03□□□□□ -0.8
MARK3-216ENST00000558953 FANCAO15360 1455 aa10.03□□□□□ -0.8
MARK3-216ENST00000558953 DENND4BO75064 1496 aaPredicted RBP10.03□□□□□ -0.8
MARK3-216ENST00000558953 RICTORQ6R327 1708 aa10.02□□□□□ -0.8
MARK3-216ENST00000558953 MYO5CQ9NQX4 1742 aa10□□□□□ -0.81
MARK3-216ENST00000558953 PTPN5P54829 565 aa10□□□□□ -0.81
MARK3-216ENST00000558953 ADAMTSL3P82987 1691 aa9.99□□□□□ -0.81
MARK3-216ENST00000558953 PLCH2O75038 1416 aa9.99□□□□□ -0.81
MARK3-216ENST00000558953 ARHGEF40Q8TER5 1519 aa9.99□□□□□ -0.81
MARK3-216ENST00000558953 TMC2Q8TDI7 906 aa9.99□□□□□ -0.81
MARK3-216ENST00000558953 HECW2Q9P2P5 1572 aa9.99□□□□□ -0.81
MARK3-216ENST00000558953 LRRIQ1Q96JM4 1722 aa9.99□□□□□ -0.81
MARK3-216ENST00000558953 ZMYM4Q5VZL5 1548 aa9.98□□□□□ -0.81
MARK3-216ENST00000558953 KIF14Q15058 1648 aa9.98□□□□□ -0.81
MARK3-216ENST00000558953 A0A0G2JS52 829 aa9.98□□□□□ -0.81
MARK3-216ENST00000558953 RTN4Q9NQC3 1192 aaKnown RBP9.98□□□□□ -0.81
MARK3-216ENST00000558953 ARID4BQ4LE39 1312 aaPredicted RBP9.98□□□□□ -0.81
MARK3-216ENST00000558953 BCORL1Q5H9F3 1711 aa9.98□□□□□ -0.81
MARK3-216ENST00000558953 CLIP1P30622 1438 aa9.98□□□□□ -0.81
MARK3-216ENST00000558953 TROQ12816 1431 aaPredicted RBP9.98□□□□□ -0.81
MARK3-216ENST00000558953 EFCAB2Q5VUJ9 269 aa9.97□□□□□ -0.81
MARK3-216ENST00000558953 MFRPQ9BY79 579 aa9.97□□□□□ -0.81
MARK3-216ENST00000558953 CASKIN1Q8WXD9 1431 aa9.97□□□□□ -0.81
MARK3-216ENST00000558953 SCAPERQ9BY12 1400 aa9.97□□□□□ -0.81
MARK3-216ENST00000558953 MAGI2Q86UL8 1455 aa9.97□□□□□ -0.81
MARK3-216ENST00000558953 PPP4R3BQ5MIZ7 849 aa9.96□□□□□ -0.82
MARK3-216ENST00000558953 PTPRMP28827 1452 aa9.96□□□□□ -0.82
MARK3-216ENST00000558953 CCDC18Q5T9S5 1454 aa9.96□□□□□ -0.82
MARK3-216ENST00000558953 ZFYVE16Q7Z3T8 1539 aa9.96□□□□□ -0.82
MARK3-216ENST00000558953 BCL11BQ9C0K0 894 aaPredicted RBP9.95□□□□□ -0.82
MARK3-216ENST00000558953 POGZQ7Z3K3 1410 aa9.95□□□□□ -0.82
MARK3-216ENST00000558953 PCF11O94913 1555 aaKnown RBP9.95□□□□□ -0.82
MARK3-216ENST00000558953 MADDQ8WXG6 1647 aa9.95□□□□□ -0.82
MARK3-216ENST00000558953 ARHGAP5Q13017 1502 aa9.93□□□□□ -0.82
MARK3-216ENST00000558953 YEATS2Q9ULM3 1422 aa9.93□□□□□ -0.82
MARK3-216ENST00000558953 FYCO1Q9BQS8 1478 aa9.92□□□□□ -0.82
MARK3-216ENST00000558953 PTCD2Q8WV60 388 aaKnown RBP9.92□□□□□ -0.82
MARK3-216ENST00000558953 CDC42BPBQ9Y5S2 1711 aa9.92□□□□□ -0.82
MARK3-216ENST00000558953 RIMS1Q86UR5 1692 aaKnown RBP9.92□□□□□ -0.82
MARK3-216ENST00000558953 KCNK17Q96T54 332 aa9.91□□□□□ -0.82
MARK3-216ENST00000558953 VPS9D1Q9Y2B5 631 aa9.91□□□□□ -0.82
MARK3-216ENST00000558953 PREX2Q70Z35 1606 aa9.91□□□□□ -0.82
MARK3-216ENST00000558953 ATP10AO60312 1499 aa9.91□□□□□ -0.82
MARK3-216ENST00000558953 ZNF518AQ6AHZ1 1483 aa9.91□□□□□ -0.82
MARK3-216ENST00000558953 SIGLEC1Q9BZZ2 1709 aa9.9□□□□□ -0.82
MARK3-216ENST00000558953 TAOK2Q9UL54 1235 aa9.9□□□□□ -0.82
MARK3-216ENST00000558953 STK24Q9Y6E0 443 aa9.9□□□□□ -0.82
MARK3-216ENST00000558953 KDM5CP41229 1560 aa9.89□□□□□ -0.83
MARK3-216ENST00000558953 CDC42BPAQ5VT25 1732 aa9.89□□□□□ -0.83
MARK3-216ENST00000558953 C9orf84Q5VXU9 1444 aa9.89□□□□□ -0.83
MARK3-216ENST00000558953 FER1L4A9Z1Z3 1794 aa9.88□□□□□ -0.83
MARK3-216ENST00000558953 MLECQ14165 292 aa9.88□□□□□ -0.83
MARK3-216ENST00000558953 THSD4Q6ZMP0 1018 aa9.88□□□□□ -0.83
MARK3-216ENST00000558953 Q6ZNB5 142 aa9.88□□□□□ -0.83
MARK3-216ENST00000558953 AFAP1Q8N556 730 aa9.88□□□□□ -0.83
MARK3-216ENST00000558953 ABCC1P33527 1531 aa9.87□□□□□ -0.83
MARK3-216ENST00000558953 ITSN2Q9NZM3 1697 aa9.87□□□□□ -0.83
MARK3-216ENST00000558953 MLH3Q9UHC1 1453 aa9.86□□□□□ -0.83
MARK3-216ENST00000558953 AMER1Q5JTC6 1135 aaPredicted RBP9.86□□□□□ -0.83
MARK3-216ENST00000558953 ARHGEF12Q9NZN5 1544 aa9.86□□□□□ -0.83
MARK3-216ENST00000558953 DIP2CQ9Y2E4 1556 aa9.85□□□□□ -0.83
MARK3-216ENST00000558953 LMTK3Q96Q04 1460 aa9.85□□□□□ -0.83
MARK3-216ENST00000558953 REREQ9P2R6 1566 aa9.84□□□□□ -0.83
MARK3-216ENST00000558953 TRAPPC8Q9Y2L5 1435 aa9.84□□□□□ -0.83
MARK3-216ENST00000558953 GPATCH8Q9UKJ3 1502 aaKnown RBP9.84□□□□□ -0.83
MARK3-216ENST00000558953 ABCA6Q8N139 1617 aa9.83□□□□□ -0.84
MARK3-216ENST00000558953 SLC4A5Q9BY07 1137 aa9.83□□□□□ -0.84
MARK3-216ENST00000558953 ZNF777Q9ULD5 760 aaPredicted RBP9.83□□□□□ -0.84
MARK3-216ENST00000558953 MTUS2Q5JR59 1369 aa9.83□□□□□ -0.84
MARK3-216ENST00000558953 GOLGA8CPA6NN73 597 aa9.82□□□□□ -0.84
MARK3-216ENST00000558953 TBC1D12O60347 775 aa9.82□□□□□ -0.84
MARK3-216ENST00000558953 SAMD9LQ8IVG5 1584 aa9.82□□□□□ -0.84
MARK3-216ENST00000558953 KIDINS220Q9ULH0 1771 aa9.82□□□□□ -0.84
MARK3-216ENST00000558953 AGLP35573 1532 aa9.82□□□□□ -0.84
MARK3-216ENST00000558953 CEP162Q5TB80 1403 aa9.82□□□□□ -0.84
MARK3-216ENST00000558953 PLEKHH2Q8IVE3 1493 aa9.81□□□□□ -0.84
MARK3-216ENST00000558953 CCNB3Q8WWL7 1395 aa9.81□□□□□ -0.84
MARK3-216ENST00000558953 WNT2BQ93097 391 aa9.81□□□□□ -0.84
MARK3-216ENST00000558953 CFDP1Q9UEE9 299 aaPredicted RBP9.81□□□□□ -0.84
MARK3-216ENST00000558953 SETD1BQ9UPS6 1966 aaKnown RBP9.81□□□□□ -0.84
MARK3-216ENST00000558953 BHMG1C9JSJ3 638 aaPredicted RBP9.8□□□□□ -0.84
MARK3-216ENST00000558953 STK25O00506 426 aa9.8□□□□□ -0.84
MARK3-216ENST00000558953 EHBP1L1Q8N3D4 1523 aa9.8□□□□□ -0.84
MARK3-216ENST00000558953 SYCP2Q9BX26 1530 aa9.8□□□□□ -0.84
MARK3-216ENST00000558953 KIAA1107Q9UPP5 1409 aa9.8□□□□□ -0.84
MARK3-216ENST00000558953 PREX1Q8TCU6 1659 aa9.8□□□□□ -0.84
MARK3-216ENST00000558953 HNRNPMP52272 730 aaKnown RBP eCLIP9.79□□□□□ -0.84
MARK3-216ENST00000558953 HSPA2P54652 639 aa9.79□□□□□ -0.84
MARK3-216ENST00000558953 SPAG9O60271 1321 aaKnown RBP9.79□□□□□ -0.84
MARK3-216ENST00000558953 CEBPAP49715 358 aaPredicted RBP9.78□□□□□ -0.84
MARK3-216ENST00000558953 FOXK1P85037 733 aa9.78□□□□□ -0.84
MARK3-216ENST00000558953 PLPP6Q8IY26 295 aa9.78□□□□□ -0.84
MARK3-216ENST00000558953 ESF1Q9H501 851 aaKnown RBP9.78□□□□□ -0.84
MARK3-216ENST00000558953 TIAM1Q13009 1591 aa9.77□□□□□ -0.85
MARK3-216ENST00000558953 MRPL50Q8N5N7 158 aaKnown RBP9.77□□□□□ -0.85
MARK3-216ENST00000558953 C3P01024 1663 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms