RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 ZNF579Q8NAF0 562 aaKnown RBP15.71■□□□□ 0.11
SPG11-212ENST00000558790 BBXQ8WY36 941 aaPredicted RBP15.71■□□□□ 0.11
SPG11-212ENST00000558790 HNRNPMP52272 730 aaKnown RBP eCLIP15.7■□□□□ 0.1
SPG11-212ENST00000558790 ZMYM3Q14202 1370 aa15.7■□□□□ 0.1
SPG11-212ENST00000558790 CCNB3Q8WWL7 1395 aa15.7■□□□□ 0.1
SPG11-212ENST00000558790 PTPRKQ15262 1439 aa15.68■□□□□ 0.1
SPG11-212ENST00000558790 PLA2R1Q13018 1463 aa15.68■□□□□ 0.1
SPG11-212ENST00000558790 POTEHQ6S545 545 aa15.68■□□□□ 0.1
SPG11-212ENST00000558790 MTUS2Q5JR59 1369 aa15.67■□□□□ 0.1
SPG11-212ENST00000558790 SLC24A1O60721 1099 aa15.67■□□□□ 0.1
SPG11-212ENST00000558790 BCL11BQ9C0K0 894 aaPredicted RBP15.67■□□□□ 0.1
SPG11-212ENST00000558790 CFDP1Q9UEE9 299 aaPredicted RBP15.67■□□□□ 0.1
SPG11-212ENST00000558790 TOM1O60784 492 aa15.66■□□□□ 0.1
SPG11-212ENST00000558790 DNMT1P26358 1616 aaKnown RBP15.65■□□□□ 0.1
SPG11-212ENST00000558790 PLCB2Q00722 1185 aa15.65■□□□□ 0.1
SPG11-212ENST00000558790 STK24Q9Y6E0 443 aa15.65■□□□□ 0.1
SPG11-212ENST00000558790 MBD5Q9P267 1494 aa15.65■□□□□ 0.1
SPG11-212ENST00000558790 PDAP1Q13442 181 aaKnown RBP15.64■□□□□ 0.09
SPG11-212ENST00000558790 NEURL4Q96JN8 1562 aa15.64■□□□□ 0.09
SPG11-212ENST00000558790 SGIP1Q9BQI5 828 aa15.64■□□□□ 0.09
SPG11-212ENST00000558790 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.64■□□□□ 0.09
SPG11-212ENST00000558790 POTEAQ6S8J7 498 aa15.63■□□□□ 0.09
SPG11-212ENST00000558790 MS4A3Q96HJ5 214 aa15.63■□□□□ 0.09
SPG11-212ENST00000558790 STRCP1A6NGW2 1772 aa15.62■□□□□ 0.09
SPG11-212ENST00000558790 CEP162Q5TB80 1403 aa15.62■□□□□ 0.09
SPG11-212ENST00000558790 PSEN1P49768 467 aa15.62■□□□□ 0.09
SPG11-212ENST00000558790 CPS1P31327 1500 aa15.62■□□□□ 0.09
SPG11-212ENST00000558790 ZNF644Q9H582 1327 aaPredicted RBP15.62■□□□□ 0.09
SPG11-212ENST00000558790 A2ML1A8K2U0 1454 aa15.61■□□□□ 0.09
SPG11-212ENST00000558790 CAMSAP2Q08AD1 1489 aa15.61■□□□□ 0.09
SPG11-212ENST00000558790 SHANK2Q9UPX8 1470 aa15.61■□□□□ 0.09
SPG11-212ENST00000558790 KDM5DQ9BY66 1539 aa15.61■□□□□ 0.09
SPG11-212ENST00000558790 GGT6Q6P531 493 aa15.6■□□□□ 0.09
SPG11-212ENST00000558790 PAXIP1Q6ZW49 1069 aaPredicted RBP15.6■□□□□ 0.09
SPG11-212ENST00000558790 VWDEQ8N2E2 1590 aa15.6■□□□□ 0.09
SPG11-212ENST00000558790 RTEL1-TNFRSF6BF6WH68 1400 aa15.6■□□□□ 0.09
SPG11-212ENST00000558790 CCDC141Q6ZP82 1450 aa15.59■□□□□ 0.09
SPG11-212ENST00000558790 FAM135AQ9P2D6 1515 aa15.59■□□□□ 0.09
SPG11-212ENST00000558790 CFAP44Q96MT7 982 aa15.58■□□□□ 0.08
SPG11-212ENST00000558790 TRPC6Q9Y210 931 aa15.58■□□□□ 0.08
SPG11-212ENST00000558790 NCOA2Q15596 1464 aa15.58■□□□□ 0.08
SPG11-212ENST00000558790 NKX1-1Q15270 411 aaPredicted RBP15.57■□□□□ 0.08
SPG11-212ENST00000558790 PZPP20742 1482 aa15.57■□□□□ 0.08
SPG11-212ENST00000558790 ARHGEF5Q12774 1597 aa15.57■□□□□ 0.08
SPG11-212ENST00000558790 RNF17Q9BXT8 1623 aaKnown RBP15.55■□□□□ 0.08
SPG11-212ENST00000558790 DHX29Q7Z478 1369 aaKnown RBP15.55■□□□□ 0.08
SPG11-212ENST00000558790 ZC3H13Q5T200 1668 aaKnown RBP15.54■□□□□ 0.08
SPG11-212ENST00000558790 TNRQ92752 1358 aa15.52■□□□□ 0.08
SPG11-212ENST00000558790 CEP152O94986 1710 aa15.52■□□□□ 0.08
SPG11-212ENST00000558790 GALR2O43603 387 aaPredicted RBP15.52■□□□□ 0.08
SPG11-212ENST00000558790 DEPDC5O75140 1603 aa15.52■□□□□ 0.08
SPG11-212ENST00000558790 CFAP65Q6ZU64 1925 aaKnown RBP15.52■□□□□ 0.07
SPG11-212ENST00000558790 IQGAP1P46940 1657 aa15.51■□□□□ 0.07
SPG11-212ENST00000558790 EIF2AK4Q9P2K8 1649 aaKnown RBP15.5■□□□□ 0.07
SPG11-212ENST00000558790 MAST1Q9Y2H9 1570 aa15.5■□□□□ 0.07
SPG11-212ENST00000558790 SPRYD3Q8NCJ5 442 aa15.5■□□□□ 0.07
SPG11-212ENST00000558790 HAP1P54257 671 aaPredicted RBP15.49■□□□□ 0.07
SPG11-212ENST00000558790 XIRP1Q702N8 1843 aaKnown RBP15.49■□□□□ 0.07
SPG11-212ENST00000558790 MROH1Q8NDA8 1641 aa15.49■□□□□ 0.07
SPG11-212ENST00000558790 UGGT1Q9NYU2 1555 aa15.49■□□□□ 0.07
SPG11-212ENST00000558790 NLRP1Q9C000 1473 aa15.48■□□□□ 0.07
SPG11-212ENST00000558790 KIF3BO15066 747 aa15.48■□□□□ 0.07
SPG11-212ENST00000558790 FBXO31Q5XUX0 539 aaPredicted RBP15.48■□□□□ 0.07
SPG11-212ENST00000558790 ABCC3O15438 1527 aa15.48■□□□□ 0.07
SPG11-212ENST00000558790 LRRC7Q96NW7 1537 aa15.48■□□□□ 0.07
SPG11-212ENST00000558790 CROCC2H7BZ55 1655 aa15.47■□□□□ 0.07
SPG11-212ENST00000558790 CABP2Q9NPB3 220 aa15.46■□□□□ 0.07
SPG11-212ENST00000558790 UBR1Q8IWV7 1749 aa15.46■□□□□ 0.06
SPG11-212ENST00000558790 TMEM106CQ9BVX2 250 aa15.45■□□□□ 0.06
SPG11-212ENST00000558790 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.45■□□□□ 0.06
SPG11-212ENST00000558790 LRRC9Q6ZRR7 1453 aa15.45■□□□□ 0.06
SPG11-212ENST00000558790 SYNMO15061 1565 aa15.45■□□□□ 0.06
SPG11-212ENST00000558790 MED14O60244 1454 aa15.44■□□□□ 0.06
SPG11-212ENST00000558790 WASHC2CQ9Y4E1 1318 aa15.43■□□□□ 0.06
SPG11-212ENST00000558790 MIA2Q96PC5 1412 aa15.43■□□□□ 0.06
SPG11-212ENST00000558790 UPF1Q92900 1129 aaKnown RBP eCLIP15.42■□□□□ 0.06
SPG11-212ENST00000558790 NPHP4O75161 1426 aaPredicted RBP15.42■□□□□ 0.06
SPG11-212ENST00000558790 VPS8Q8N3P4 1428 aa15.42■□□□□ 0.06
SPG11-212ENST00000558790 ERVK-7P63135 1459 aa15.41■□□□□ 0.06
SPG11-212ENST00000558790 GTPBP6O43824 516 aaPredicted RBP15.41■□□□□ 0.06
SPG11-212ENST00000558790 RSPH4AQ5TD94 716 aa15.41■□□□□ 0.06
SPG11-212ENST00000558790 EFCAB3Q8N7B9 438 aa15.4■□□□□ 0.06
SPG11-212ENST00000558790 PRDM15P57071 1507 aaPredicted RBP15.39■□□□□ 0.05
SPG11-212ENST00000558790 MYOM3Q5VTT5 1437 aa15.37■□□□□ 0.05
SPG11-212ENST00000558790 GABBR2O75899 941 aa15.37■□□□□ 0.05
SPG11-212ENST00000558790 TIE1P35590 1138 aa15.37■□□□□ 0.05
SPG11-212ENST00000558790 ANKLE2Q86XL3 938 aa15.37■□□□□ 0.05
SPG11-212ENST00000558790 BMP2KQ9NSY1 1161 aaPredicted RBP15.37■□□□□ 0.05
SPG11-212ENST00000558790 MAP3K1Q13233 1512 aa15.37■□□□□ 0.05
SPG11-212ENST00000558790 DUOX2Q9NRD8 1548 aa15.37■□□□□ 0.05
SPG11-212ENST00000558790 TTLL13PA6NNM8 815 aa15.36■□□□□ 0.05
SPG11-212ENST00000558790 TSPY4P0CV99 314 aa15.36■□□□□ 0.05
SPG11-212ENST00000558790 TSPY10P0CW01 314 aa15.36■□□□□ 0.05
SPG11-212ENST00000558790 THEMISQ8N1K5 641 aaPredicted RBP15.36■□□□□ 0.05
SPG11-212ENST00000558790 PIK3C2BO00750 1634 aa15.35■□□□□ 0.05
SPG11-212ENST00000558790 PTPN23Q9H3S7 1636 aa15.34■□□□□ 0.05
SPG11-212ENST00000558790 ROBO1Q9Y6N7 1651 aa15.33■□□□□ 0.04
SPG11-212ENST00000558790 CLCN6P51797 869 aa15.33■□□□□ 0.04
SPG11-212ENST00000558790 MFRPQ9BY79 579 aa15.33■□□□□ 0.04
SPG11-212ENST00000558790 TSHZ2Q9NRE2 1034 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms