RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 TET3O43151 1660 aa14.57□□□□□ -0.08
CSPG4P5-201ENST00000558731 SRPK2P78362 688 aaKnown RBP14.57□□□□□ -0.08
CSPG4P5-201ENST00000558731 CENPJQ9HC77 1338 aaPredicted RBP14.56□□□□□ -0.08
CSPG4P5-201ENST00000558731 MINK1Q8N4C8 1332 aaPredicted RBP14.56□□□□□ -0.08
CSPG4P5-201ENST00000558731 SLC52A1Q9NWF4 448 aa14.55□□□□□ -0.08
CSPG4P5-201ENST00000558731 EFCAB6Q5THR3 1501 aa14.55□□□□□ -0.08
CSPG4P5-201ENST00000558731 FRMPD1Q5SYB0 1578 aa14.55□□□□□ -0.08
CSPG4P5-201ENST00000558731 SPHKAPQ2M3C7 1700 aa14.55□□□□□ -0.08
CSPG4P5-201ENST00000558731 DIP2BQ9P265 1576 aa14.54□□□□□ -0.08
CSPG4P5-201ENST00000558731 PPRC1Q5VV67 1664 aaKnown RBP14.54□□□□□ -0.08
CSPG4P5-201ENST00000558731 STAC3Q96MF2 364 aa14.54□□□□□ -0.08
CSPG4P5-201ENST00000558731 MYBBP1AQ9BQG0 1328 aaKnown RBP14.54□□□□□ -0.08
CSPG4P5-201ENST00000558731 RALBP1Q15311 655 aa14.54□□□□□ -0.08
CSPG4P5-201ENST00000558731 DIP2CQ9Y2E4 1556 aa14.53□□□□□ -0.08
CSPG4P5-201ENST00000558731 CABP2Q9NPB3 220 aa14.53□□□□□ -0.08
CSPG4P5-201ENST00000558731 ABCC3O15438 1527 aa14.53□□□□□ -0.08
CSPG4P5-201ENST00000558731 GPRASP1Q5JY77 1395 aa14.53□□□□□ -0.08
CSPG4P5-201ENST00000558731 SCAF11Q99590 1463 aaKnown RBP14.52□□□□□ -0.08
CSPG4P5-201ENST00000558731 MROH1Q8NDA8 1641 aa14.52□□□□□ -0.08
CSPG4P5-201ENST00000558731 BCL11AQ9H165 835 aa14.52□□□□□ -0.08
CSPG4P5-201ENST00000558731 SLC12A5Q9H2X9 1139 aa14.52□□□□□ -0.08
CSPG4P5-201ENST00000558731 COL17A1Q9UMD9 1497 aaPredicted RBP14.52□□□□□ -0.08
CSPG4P5-201ENST00000558731 TRPM1Q7Z4N2 1603 aa14.52□□□□□ -0.09
CSPG4P5-201ENST00000558731 NLRP13Q86W25 1043 aa14.51□□□□□ -0.09
CSPG4P5-201ENST00000558731 ANP32EQ9BTT0 268 aa14.51□□□□□ -0.09
CSPG4P5-201ENST00000558731 NUTM2FA1L443 756 aa14.5□□□□□ -0.09
CSPG4P5-201ENST00000558731 WDR43Q15061 677 aaKnown RBP eCLIP14.5□□□□□ -0.09
CSPG4P5-201ENST00000558731 C14orf93Q9H972 538 aaKnown RBP14.5□□□□□ -0.09
CSPG4P5-201ENST00000558731 RNF17Q9BXT8 1623 aaKnown RBP14.5□□□□□ -0.09
CSPG4P5-201ENST00000558731 DEPDC5O75140 1603 aa14.49□□□□□ -0.09
CSPG4P5-201ENST00000558731 EIF2AK4Q9P2K8 1649 aaKnown RBP14.49□□□□□ -0.09
CSPG4P5-201ENST00000558731 MAP3K4Q9Y6R4 1608 aa14.49□□□□□ -0.09
CSPG4P5-201ENST00000558731 PRAM1Q96QH2 718 aa14.49□□□□□ -0.09
CSPG4P5-201ENST00000558731 RPGRIP1LQ68CZ1 1315 aa14.47□□□□□ -0.09
CSPG4P5-201ENST00000558731 PER1O15534 1290 aaPredicted RBP14.47□□□□□ -0.09
CSPG4P5-201ENST00000558731 PNISRQ8TF01 805 aaKnown RBP14.47□□□□□ -0.09
CSPG4P5-201ENST00000558731 VWDEQ8N2E2 1590 aa14.47□□□□□ -0.09
CSPG4P5-201ENST00000558731 WAPLQ7Z5K2 1190 aa14.46□□□□□ -0.09
CSPG4P5-201ENST00000558731 KIF1BO60333 1816 aa14.46□□□□□ -0.1
CSPG4P5-201ENST00000558731 RICTORQ6R327 1708 aa14.45□□□□□ -0.1
CSPG4P5-201ENST00000558731 MORC1Q86VD1 984 aa14.45□□□□□ -0.1
CSPG4P5-201ENST00000558731 CCDC146Q8IYE0 955 aa14.45□□□□□ -0.1
CSPG4P5-201ENST00000558731 MADDQ8WXG6 1647 aa14.44□□□□□ -0.1
CSPG4P5-201ENST00000558731 GLI2P10070 1586 aa14.44□□□□□ -0.1
CSPG4P5-201ENST00000558731 TXNDC2Q86VQ3 553 aa14.44□□□□□ -0.1
CSPG4P5-201ENST00000558731 EVC2Q86UK5 1308 aa14.44□□□□□ -0.1
CSPG4P5-201ENST00000558731 ZMYM3Q14202 1370 aa14.43□□□□□ -0.1
CSPG4P5-201ENST00000558731 NEUROD2Q15784 382 aa14.43□□□□□ -0.1
CSPG4P5-201ENST00000558731 PPM1GO15355 546 aaPredicted RBP14.43□□□□□ -0.1
CSPG4P5-201ENST00000558731 SLC26A8Q96RN1 970 aa14.43□□□□□ -0.1
CSPG4P5-201ENST00000558731 TSHZ2Q9NRE2 1034 aa14.42□□□□□ -0.1
CSPG4P5-201ENST00000558731 ZBED9Q6R2W3 1325 aa14.42□□□□□ -0.1
CSPG4P5-201ENST00000558731 PPP2R1AP30153 589 aa14.41□□□□□ -0.1
CSPG4P5-201ENST00000558731 LMTK2Q8IWU2 1503 aa14.41□□□□□ -0.1
CSPG4P5-201ENST00000558731 CAMSAP1Q5T5Y3 1602 aa14.41□□□□□ -0.1
CSPG4P5-201ENST00000558731 SLC24A1O60721 1099 aa14.41□□□□□ -0.1
CSPG4P5-201ENST00000558731 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.41□□□□□ -0.1
CSPG4P5-201ENST00000558731 MROH2AA6NES4 1674 aa14.41□□□□□ -0.1
CSPG4P5-201ENST00000558731 BRD4O60885 1362 aaPredicted RBP14.4□□□□□ -0.1
CSPG4P5-201ENST00000558731 CARD14Q9BXL6 1004 aa14.4□□□□□ -0.1
CSPG4P5-201ENST00000558731 ADAMTS8Q9UP79 889 aa14.4□□□□□ -0.1
CSPG4P5-201ENST00000558731 PLEKHG5O94827 1062 aa14.39□□□□□ -0.11
CSPG4P5-201ENST00000558731 GGNBP2Q9H3C7 697 aa14.39□□□□□ -0.11
CSPG4P5-201ENST00000558731 AMER1Q5JTC6 1135 aaPredicted RBP14.38□□□□□ -0.11
CSPG4P5-201ENST00000558731 PIK3C2GO75747 1445 aa14.38□□□□□ -0.11
CSPG4P5-201ENST00000558731 HDGFP51858 240 aaKnown RBP14.38□□□□□ -0.11
CSPG4P5-201ENST00000558731 ADGRB3O60242 1522 aa14.37□□□□□ -0.11
CSPG4P5-201ENST00000558731 MYOM2P54296 1465 aa14.37□□□□□ -0.11
CSPG4P5-201ENST00000558731 SOX12O15370 315 aa14.37□□□□□ -0.11
CSPG4P5-201ENST00000558731 ERVK-7P63135 1459 aa14.36□□□□□ -0.11
CSPG4P5-201ENST00000558731 SYNMO15061 1565 aa14.36□□□□□ -0.11
CSPG4P5-201ENST00000558731 CDK19Q9BWU1 502 aa14.36□□□□□ -0.11
CSPG4P5-201ENST00000558731 CDCA7LQ96GN5 454 aa14.36□□□□□ -0.11
CSPG4P5-201ENST00000558731 PPP6R1Q9UPN7 881 aa14.36□□□□□ -0.11
CSPG4P5-201ENST00000558731 EID1Q9Y6B2 187 aa14.36□□□□□ -0.11
CSPG4P5-201ENST00000558731 PARD3Q8TEW0 1356 aa14.36□□□□□ -0.11
CSPG4P5-201ENST00000558731 TNRQ92752 1358 aa14.36□□□□□ -0.11
CSPG4P5-201ENST00000558731 NSD3Q9BZ95 1437 aa14.36□□□□□ -0.11
CSPG4P5-201ENST00000558731 CABP1Q9NZU7 370 aa14.35□□□□□ -0.11
CSPG4P5-201ENST00000558731 RIMS2Q9UQ26 1411 aa14.35□□□□□ -0.11
CSPG4P5-201ENST00000558731 ERICH6Q7L0X2 663 aa14.35□□□□□ -0.11
CSPG4P5-201ENST00000558731 U2SURPO15042 1029 aaKnown RBP14.35□□□□□ -0.11
CSPG4P5-201ENST00000558731 ARHGAP31Q2M1Z3 1444 aa14.34□□□□□ -0.11
CSPG4P5-201ENST00000558731 SIGLEC1Q9BZZ2 1709 aa14.34□□□□□ -0.11
CSPG4P5-201ENST00000558731 CLTCQ00610 1675 aaKnown RBP14.34□□□□□ -0.11
CSPG4P5-201ENST00000558731 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.33□□□□□ -0.11
CSPG4P5-201ENST00000558731 NUDCQ9Y266 331 aa14.33□□□□□ -0.12
CSPG4P5-201ENST00000558731 RRP7AQ9Y3A4 280 aaKnown RBP14.33□□□□□ -0.12
CSPG4P5-201ENST00000558731 CGNL1Q0VF96 1302 aa14.33□□□□□ -0.12
CSPG4P5-201ENST00000558731 HDGFL2Q7Z4V5 671 aaPredicted RBP14.32□□□□□ -0.12
CSPG4P5-201ENST00000558731 RBM33Q96EV2 1170 aaKnown RBP14.32□□□□□ -0.12
CSPG4P5-201ENST00000558731 B4GALNT3Q6L9W6 998 aa14.32□□□□□ -0.12
CSPG4P5-201ENST00000558731 NCKAP5LQ9HCH0 1330 aa14.32□□□□□ -0.12
CSPG4P5-201ENST00000558731 POLR1AO95602 1720 aaPredicted RBP14.32□□□□□ -0.12
CSPG4P5-201ENST00000558731 TERF2IPQ9NYB0 399 aa14.32□□□□□ -0.12
CSPG4P5-201ENST00000558731 ZMYM4Q5VZL5 1548 aa14.31□□□□□ -0.12
CSPG4P5-201ENST00000558731 APAF1O14727 1248 aa14.31□□□□□ -0.12
CSPG4P5-201ENST00000558731 FBLN1P23142 703 aa14.31□□□□□ -0.12
CSPG4P5-201ENST00000558731 MTHFSP49914 203 aa14.31□□□□□ -0.12
CSPG4P5-201ENST00000558731 KIF13AQ9H1H9 1805 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms