RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 ELL2O00472 640 aaPredicted RBP19.71■□□□□ 0.75
AP4E1-202ENST00000558439 PMFBP1Q8TBY8 1022 aa19.7■□□□□ 0.74
AP4E1-202ENST00000558439 GGNBP2Q9H3C7 697 aa19.7■□□□□ 0.74
AP4E1-202ENST00000558439 RALGAPBQ86X10 1494 aa19.7■□□□□ 0.74
AP4E1-202ENST00000558439 TARBP1Q13395 1621 aaKnown RBP19.7■□□□□ 0.74
AP4E1-202ENST00000558439 VGFO15240 615 aaPredicted RBP19.7■□□□□ 0.74
AP4E1-202ENST00000558439 MFAP1P55081 439 aaKnown RBP19.69■□□□□ 0.74
AP4E1-202ENST00000558439 TESK2Q96S53 571 aa19.69■□□□□ 0.74
AP4E1-202ENST00000558439 STAC3Q96MF2 364 aa19.69■□□□□ 0.74
AP4E1-202ENST00000558439 EVC2Q86UK5 1308 aa19.69■□□□□ 0.74
AP4E1-202ENST00000558439 TERF2IPQ9NYB0 399 aa19.69■□□□□ 0.74
AP4E1-202ENST00000558439 C14orf37Q86TY3 774 aa19.68■□□□□ 0.74
AP4E1-202ENST00000558439 RUNDC1Q96C34 613 aa19.68■□□□□ 0.74
AP4E1-202ENST00000558439 PER1O15534 1290 aaPredicted RBP19.67■□□□□ 0.74
AP4E1-202ENST00000558439 ZBTB7CA1YPR0 619 aa19.67■□□□□ 0.74
AP4E1-202ENST00000558439 PBRM1Q86U86 1689 aa19.67■□□□□ 0.74
AP4E1-202ENST00000558439 NUTM2FA1L443 756 aa19.67■□□□□ 0.74
AP4E1-202ENST00000558439 APBB1O00213 710 aa19.66■□□□□ 0.74
AP4E1-202ENST00000558439 ADGRF5Q8IZF2 1346 aa19.66■□□□□ 0.74
AP4E1-202ENST00000558439 DENND4BO75064 1496 aaPredicted RBP19.65■□□□□ 0.74
AP4E1-202ENST00000558439 GZF1Q9H116 711 aaPredicted RBP19.65■□□□□ 0.74
AP4E1-202ENST00000558439 PNNQ9H307 717 aaKnown RBP19.65■□□□□ 0.74
AP4E1-202ENST00000558439 PRAG1Q86YV5 1406 aa19.64■□□□□ 0.74
AP4E1-202ENST00000558439 SLFN5Q08AF3 891 aa19.64■□□□□ 0.73
AP4E1-202ENST00000558439 IPO8O15397 1037 aaKnown RBP19.63■□□□□ 0.73
AP4E1-202ENST00000558439 GCC2Q8IWJ2 1684 aa19.63■□□□□ 0.73
AP4E1-202ENST00000558439 DUSP27Q5VZP5 1158 aa19.63■□□□□ 0.73
AP4E1-202ENST00000558439 ZKSCAN2Q63HK3 967 aa19.62■□□□□ 0.73
AP4E1-202ENST00000558439 EIF4G3O43432 1585 aaKnown RBP19.62■□□□□ 0.73
AP4E1-202ENST00000558439 USP35Q9P2H5 1018 aa19.61■□□□□ 0.73
AP4E1-202ENST00000558439 PARD3Q8TEW0 1356 aa19.61■□□□□ 0.73
AP4E1-202ENST00000558439 FAM135AQ9P2D6 1515 aa19.61■□□□□ 0.73
AP4E1-202ENST00000558439 RAPGEF3O95398 923 aa19.61■□□□□ 0.73
AP4E1-202ENST00000558439 SYCP2Q9BX26 1530 aa19.6■□□□□ 0.73
AP4E1-202ENST00000558439 ITSN2Q9NZM3 1697 aa19.6■□□□□ 0.73
AP4E1-202ENST00000558439 NFKBIBQ15653 356 aa19.6■□□□□ 0.73
AP4E1-202ENST00000558439 HSP90AB1P08238 724 aaKnown RBP19.6■□□□□ 0.73
AP4E1-202ENST00000558439 TSR2Q969E8 191 aaKnown RBP19.59■□□□□ 0.73
AP4E1-202ENST00000558439 RIPK4P57078 832 aa19.59■□□□□ 0.73
AP4E1-202ENST00000558439 CYB5RLQ6IPT4 315 aa19.59■□□□□ 0.73
AP4E1-202ENST00000558439 HSCBQ8IWL3 235 aa19.59■□□□□ 0.73
AP4E1-202ENST00000558439 AMER1Q5JTC6 1135 aaPredicted RBP19.58■□□□□ 0.73
AP4E1-202ENST00000558439 OSCARQ8IYS5 282 aa19.57■□□□□ 0.72
AP4E1-202ENST00000558439 DZIP1LQ8IYY4 767 aaKnown RBP19.57■□□□□ 0.72
AP4E1-202ENST00000558439 GSE1Q14687 1217 aa19.57■□□□□ 0.72
AP4E1-202ENST00000558439 WWC1Q8IX03 1113 aa19.57■□□□□ 0.72
AP4E1-202ENST00000558439 NCLP19338 710 aaKnown RBP19.57■□□□□ 0.72
AP4E1-202ENST00000558439 ANP32BQ92688 251 aaKnown RBP19.56■□□□□ 0.72
AP4E1-202ENST00000558439 NGEFQ8N5V2 710 aa19.55■□□□□ 0.72
AP4E1-202ENST00000558439 HMOX1P09601 288 aa19.55■□□□□ 0.72
AP4E1-202ENST00000558439 ADGRL2O95490 1459 aa19.55■□□□□ 0.72
AP4E1-202ENST00000558439 FOXD4L1Q9NU39 408 aa19.54■□□□□ 0.72
AP4E1-202ENST00000558439 UHRF1BP1Q6BDS2 1440 aa19.54■□□□□ 0.72
AP4E1-202ENST00000558439 DIAPH1O60610 1272 aaKnown RBP19.54■□□□□ 0.72
AP4E1-202ENST00000558439 LRPPRCP42704 1394 aaKnown RBP19.53■□□□□ 0.72
AP4E1-202ENST00000558439 EXOSC9Q06265 439 aaKnown RBP19.53■□□□□ 0.72
AP4E1-202ENST00000558439 TRAPPC8Q9Y2L5 1435 aa19.52■□□□□ 0.72
AP4E1-202ENST00000558439 NUP160Q12769 1436 aa19.52■□□□□ 0.72
AP4E1-202ENST00000558439 KDM5BQ9UGL1 1544 aa19.52■□□□□ 0.72
AP4E1-202ENST00000558439 PDE3AQ14432 1141 aa19.51■□□□□ 0.71
AP4E1-202ENST00000558439 TPRNQ4KMQ1 711 aa19.51■□□□□ 0.71
AP4E1-202ENST00000558439 FRAT2O75474 233 aaPredicted RBP19.51■□□□□ 0.71
AP4E1-202ENST00000558439 CEP170Q5SW79 1584 aa19.51■□□□□ 0.71
AP4E1-202ENST00000558439 NSD3Q9BZ95 1437 aa19.51■□□□□ 0.71
AP4E1-202ENST00000558439 PDZRN3Q9UPQ7 1066 aa19.51■□□□□ 0.71
AP4E1-202ENST00000558439 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.5■□□□□ 0.71
AP4E1-202ENST00000558439 PRAM1Q96QH2 718 aa19.5■□□□□ 0.71
AP4E1-202ENST00000558439 ANKRD45Q5TZF3 282 aa19.5■□□□□ 0.71
AP4E1-202ENST00000558439 CHMP4BQ9H444 224 aaKnown RBP19.5■□□□□ 0.71
AP4E1-202ENST00000558439 RNF123Q5XPI4 1314 aa19.5■□□□□ 0.71
AP4E1-202ENST00000558439 PLEKHH1Q9ULM0 1364 aa19.49■□□□□ 0.71
AP4E1-202ENST00000558439 A2MP01023 1474 aa19.49■□□□□ 0.71
AP4E1-202ENST00000558439 SPINK5Q9NQ38 1064 aaPredicted RBP19.49■□□□□ 0.71
AP4E1-202ENST00000558439 LNPKQ9C0E8 428 aa19.48■□□□□ 0.71
AP4E1-202ENST00000558439 ARHGEF12Q9NZN5 1544 aa19.48■□□□□ 0.71
AP4E1-202ENST00000558439 IL27Q8NEV9 243 aa19.47■□□□□ 0.71
AP4E1-202ENST00000558439 SCAF11Q99590 1463 aaKnown RBP19.47■□□□□ 0.71
AP4E1-202ENST00000558439 SHANK2Q9UPX8 1470 aa19.47■□□□□ 0.71
AP4E1-202ENST00000558439 LRRIQ1Q96JM4 1722 aa19.47■□□□□ 0.71
AP4E1-202ENST00000558439 GOLGA6L22H0YM25 854 aa19.47■□□□□ 0.71
AP4E1-202ENST00000558439 DDX19BQ9UMR2 479 aa19.46■□□□□ 0.71
AP4E1-202ENST00000558439 PLCH2O75038 1416 aa19.46■□□□□ 0.71
AP4E1-202ENST00000558439 IGHDP01880 384 aa19.45■□□□□ 0.7
AP4E1-202ENST00000558439 CARD14Q9BXL6 1004 aa19.45■□□□□ 0.7
AP4E1-202ENST00000558439 TRIM44Q96DX7 344 aaPredicted RBP19.45■□□□□ 0.7
AP4E1-202ENST00000558439 CALD1Q05682 793 aaKnown RBP19.44■□□□□ 0.7
AP4E1-202ENST00000558439 CABP1Q9NZU7 370 aa19.44■□□□□ 0.7
AP4E1-202ENST00000558439 LMOD2Q6P5Q4 547 aa19.43■□□□□ 0.7
AP4E1-202ENST00000558439 SLC4A10Q6U841 1118 aa19.43■□□□□ 0.7
AP4E1-202ENST00000558439 RARSP54136 660 aaKnown RBP19.43■□□□□ 0.7
AP4E1-202ENST00000558439 CASC1Q6TDU7 716 aa19.43■□□□□ 0.7
AP4E1-202ENST00000558439 ADGRL1O94910 1474 aa19.42■□□□□ 0.7
AP4E1-202ENST00000558439 MBD5Q9P267 1494 aa19.42■□□□□ 0.7
AP4E1-202ENST00000558439 PRKAR2BP31323 418 aa19.42■□□□□ 0.7
AP4E1-202ENST00000558439 RTF1Q92541 710 aaKnown RBP19.42■□□□□ 0.7
AP4E1-202ENST00000558439 BRPF3Q9ULD4 1205 aa19.41■□□□□ 0.7
AP4E1-202ENST00000558439 ABCC10Q5T3U5 1492 aa19.41■□□□□ 0.7
AP4E1-202ENST00000558439 NOS1P29475 1434 aa19.41■□□□□ 0.7
AP4E1-202ENST00000558439 HDGFP51858 240 aaKnown RBP19.41■□□□□ 0.7
AP4E1-202ENST00000558439 NOB1Q9ULX3 412 aaKnown RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms