RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 ANKLE2Q86XL3 938 aa17.38■□□□□ 0.37
LINC00648-204ENST00000557749 IQSEC2Q5JU85 1478 aa17.37■□□□□ 0.37
LINC00648-204ENST00000557749 VWDEQ8N2E2 1590 aa17.37■□□□□ 0.37
LINC00648-204ENST00000557749 FBXO3Q9UK99 471 aa17.37■□□□□ 0.37
LINC00648-204ENST00000557749 RPRD2Q5VT52 1461 aaKnown RBP17.37■□□□□ 0.37
LINC00648-204ENST00000557749 POLR1AO95602 1720 aaPredicted RBP17.36■□□□□ 0.37
LINC00648-204ENST00000557749 NCKAP5LQ9HCH0 1330 aa17.36■□□□□ 0.37
LINC00648-204ENST00000557749 EFCAB6Q5THR3 1501 aa17.34■□□□□ 0.37
LINC00648-204ENST00000557749 RRBP1Q9P2E9 1410 aaKnown RBP17.32■□□□□ 0.36
LINC00648-204ENST00000557749 MED14O60244 1454 aa17.31■□□□□ 0.36
LINC00648-204ENST00000557749 PRR29P0C7W0 189 aa17.31■□□□□ 0.36
LINC00648-204ENST00000557749 KDM5AP29375 1690 aaKnown RBP17.31■□□□□ 0.36
LINC00648-204ENST00000557749 UNC13BO14795 1591 aa17.31■□□□□ 0.36
LINC00648-204ENST00000557749 SLC52A1Q9NWF4 448 aa17.3■□□□□ 0.36
LINC00648-204ENST00000557749 TET3O43151 1660 aa17.29■□□□□ 0.36
LINC00648-204ENST00000557749 LTBP4Q8N2S1 1624 aa17.29■□□□□ 0.36
LINC00648-204ENST00000557749 NPHP4O75161 1426 aaPredicted RBP17.29■□□□□ 0.36
LINC00648-204ENST00000557749 UBR1Q8IWV7 1749 aa17.28■□□□□ 0.36
LINC00648-204ENST00000557749 CFAP65Q6ZU64 1925 aaKnown RBP17.28■□□□□ 0.36
LINC00648-204ENST00000557749 FXR2P51116 673 aaKnown RBP eCLIP17.28■□□□□ 0.36
LINC00648-204ENST00000557749 EID1Q9Y6B2 187 aa17.28■□□□□ 0.36
LINC00648-204ENST00000557749 NEURL4Q96JN8 1562 aa17.28■□□□□ 0.36
LINC00648-204ENST00000557749 GCC2Q8IWJ2 1684 aa17.27■□□□□ 0.36
LINC00648-204ENST00000557749 ITGAEP38570 1179 aa17.27■□□□□ 0.36
LINC00648-204ENST00000557749 VASPP50552 380 aaPredicted RBP17.27■□□□□ 0.36
LINC00648-204ENST00000557749 NOS1P29475 1434 aa17.27■□□□□ 0.35
LINC00648-204ENST00000557749 SLIT1O75093 1534 aa17.26■□□□□ 0.35
LINC00648-204ENST00000557749 CPS1P31327 1500 aa17.26■□□□□ 0.35
LINC00648-204ENST00000557749 SCAF11Q99590 1463 aaKnown RBP17.25■□□□□ 0.35
LINC00648-204ENST00000557749 PPARGC1BQ86YN6 1023 aaKnown RBP17.25■□□□□ 0.35
LINC00648-204ENST00000557749 IQGAP1P46940 1657 aa17.25■□□□□ 0.35
LINC00648-204ENST00000557749 IQGAP3Q86VI3 1631 aa17.25■□□□□ 0.35
LINC00648-204ENST00000557749 ARHGAP23Q9P227 1491 aa17.24■□□□□ 0.35
LINC00648-204ENST00000557749 CREBZFQ9NS37 354 aa17.24■□□□□ 0.35
LINC00648-204ENST00000557749 ZNF335Q9H4Z2 1342 aaPredicted RBP17.23■□□□□ 0.35
LINC00648-204ENST00000557749 PIK3C2BO00750 1634 aa17.23■□□□□ 0.35
LINC00648-204ENST00000557749 HDGFP51858 240 aaKnown RBP17.23■□□□□ 0.35
LINC00648-204ENST00000557749 PIP4P2Q8N4L2 257 aa17.23■□□□□ 0.35
LINC00648-204ENST00000557749 NUP155O75694 1391 aa17.22■□□□□ 0.35
LINC00648-204ENST00000557749 TMEM2Q9UHN6 1383 aa17.22■□□□□ 0.35
LINC00648-204ENST00000557749 ADGRB3O60242 1522 aa17.21■□□□□ 0.35
LINC00648-204ENST00000557749 SYNMO15061 1565 aa17.21■□□□□ 0.35
LINC00648-204ENST00000557749 IDI1Q13907 227 aa17.2■□□□□ 0.34
LINC00648-204ENST00000557749 TXNDC2Q86VQ3 553 aa17.2■□□□□ 0.34
LINC00648-204ENST00000557749 ACIN1Q9UKV3 1341 aaKnown RBP17.19■□□□□ 0.34
LINC00648-204ENST00000557749 HFM1A2PYH4 1435 aa17.16■□□□□ 0.34
LINC00648-204ENST00000557749 CHADLQ6NUI6 762 aa17.15■□□□□ 0.34
LINC00648-204ENST00000557749 E9PCH4 1651 aa17.15■□□□□ 0.34
LINC00648-204ENST00000557749 NAIPQ13075 1403 aa17.14■□□□□ 0.33
LINC00648-204ENST00000557749 IFNLR1Q8IU57 520 aaPredicted RBP17.14■□□□□ 0.33
LINC00648-204ENST00000557749 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.14■□□□□ 0.33
LINC00648-204ENST00000557749 MNX1P50219 401 aaPredicted RBP17.13■□□□□ 0.33
LINC00648-204ENST00000557749 UBAP1LF5GYI3 381 aa17.12■□□□□ 0.33
LINC00648-204ENST00000557749 TOM1O60784 492 aa17.12■□□□□ 0.33
LINC00648-204ENST00000557749 LTKP29376 864 aa17.12■□□□□ 0.33
LINC00648-204ENST00000557749 MIER1Q8N108 512 aa17.12■□□□□ 0.33
LINC00648-204ENST00000557749 PPP1R15AO75807 674 aaPredicted RBP17.11■□□□□ 0.33
LINC00648-204ENST00000557749 PRKAR2AP13861 404 aaKnown RBP17.1■□□□□ 0.33
LINC00648-204ENST00000557749 TMEM131LA2VDJ0 1609 aa17.09■□□□□ 0.33
LINC00648-204ENST00000557749 PLEKHG1Q9ULL1 1385 aa17.08■□□□□ 0.32
LINC00648-204ENST00000557749 SPHKAPQ2M3C7 1700 aa17.07■□□□□ 0.32
LINC00648-204ENST00000557749 ZFYVE9O95405 1425 aa17.07■□□□□ 0.32
LINC00648-204ENST00000557749 RIMS2Q9UQ26 1411 aa17.07■□□□□ 0.32
LINC00648-204ENST00000557749 CHGAP10645 457 aaKnown RBP17.07■□□□□ 0.32
LINC00648-204ENST00000557749 BCANQ96GW7 911 aa17.07■□□□□ 0.32
LINC00648-204ENST00000557749 PLCD3Q8N3E9 789 aa17.06■□□□□ 0.32
LINC00648-204ENST00000557749 TRIM52Q96A61 297 aa17.05■□□□□ 0.32
LINC00648-204ENST00000557749 LRRC7Q96NW7 1537 aa17.05■□□□□ 0.32
LINC00648-204ENST00000557749 KCNA6P17658 529 aa17.04■□□□□ 0.32
LINC00648-204ENST00000557749 TRPM2O94759 1503 aa17.04■□□□□ 0.32
LINC00648-204ENST00000557749 NKTRP30414 1462 aaKnown RBP17.04■□□□□ 0.32
LINC00648-204ENST00000557749 DIP2AQ14689 1571 aa17.03■□□□□ 0.32
LINC00648-204ENST00000557749 MYO5BQ9ULV0 1848 aa17.02■□□□□ 0.31
LINC00648-204ENST00000557749 PIK3R4Q99570 1358 aa17.01■□□□□ 0.31
LINC00648-204ENST00000557749 NWD1Q149M9 1564 aa17■□□□□ 0.31
LINC00648-204ENST00000557749 TBX22Q9Y458 520 aa17■□□□□ 0.31
LINC00648-204ENST00000557749 STRCP1A6NGW2 1772 aa17■□□□□ 0.31
LINC00648-204ENST00000557749 SLC26A8Q96RN1 970 aa16.99■□□□□ 0.31
LINC00648-204ENST00000557749 ZNF326Q5BKZ1 582 aaKnown RBP16.98■□□□□ 0.31
LINC00648-204ENST00000557749 KIF1BO60333 1816 aa16.97■□□□□ 0.31
LINC00648-204ENST00000557749 PIP4K2BP78356 416 aa16.96■□□□□ 0.31
LINC00648-204ENST00000557749 FARP1Q9Y4F1 1045 aaPredicted RBP16.96■□□□□ 0.31
LINC00648-204ENST00000557749 NCOA3Q9Y6Q9 1424 aa16.96■□□□□ 0.3
LINC00648-204ENST00000557749 PROSER2Q86WR7 435 aaPredicted RBP16.95■□□□□ 0.3
LINC00648-204ENST00000557749 TMEM94Q12767 1356 aa16.94■□□□□ 0.3
LINC00648-204ENST00000557749 CLTCL1P53675 1640 aa16.94■□□□□ 0.3
LINC00648-204ENST00000557749 RPGRIP1LQ68CZ1 1315 aa16.94■□□□□ 0.3
LINC00648-204ENST00000557749 MSH6P52701 1360 aa16.93■□□□□ 0.3
LINC00648-204ENST00000557749 SETD5Q9C0A6 1442 aa16.93■□□□□ 0.3
LINC00648-204ENST00000557749 SETBP1Q9Y6X0 1596 aa16.93■□□□□ 0.3
LINC00648-204ENST00000557749 CHD2O14647 1828 aaKnown RBP16.92■□□□□ 0.3
LINC00648-204ENST00000557749 CCDC144AA2RUR9 1427 aa16.92■□□□□ 0.3
LINC00648-204ENST00000557749 ADAMTS13Q76LX8 1427 aa16.92■□□□□ 0.3
LINC00648-204ENST00000557749 VGFO15240 615 aaPredicted RBP16.91■□□□□ 0.3
LINC00648-204ENST00000557749 MPHOSPH9Q99550 1183 aa16.89■□□□□ 0.29
LINC00648-204ENST00000557749 NEXMIFQ5QGS0 1516 aa16.89■□□□□ 0.29
LINC00648-204ENST00000557749 XIRP1Q702N8 1843 aaKnown RBP16.88■□□□□ 0.29
LINC00648-204ENST00000557749 FAM135BQ49AJ0 1406 aa16.87■□□□□ 0.29
LINC00648-204ENST00000557749 NUTM2DQ5VT03 806 aaPredicted RBP16.87■□□□□ 0.29
LINC00648-204ENST00000557749 ALKQ9UM73 1620 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms