RNA–Protein interactions for RNA: ENST00000556079.1

TMEM260-209, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 596 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-209ENST00000556079 TOM1O60784 492 aa9.8□□□□□ -0.84
TMEM260-209ENST00000556079 ATXN8OSP0DMR3 200 aa9.8□□□□□ -0.84
TMEM260-209ENST00000556079 STRCP1A6NGW2 1772 aa9.8□□□□□ -0.84
TMEM260-209ENST00000556079 RRBP1Q9P2E9 1410 aaKnown RBP9.8□□□□□ -0.84
TMEM260-209ENST00000556079 ANKLE2Q86XL3 938 aa9.79□□□□□ -0.84
TMEM260-209ENST00000556079 TET3O43151 1660 aa9.79□□□□□ -0.84
TMEM260-209ENST00000556079 GCC2Q8IWJ2 1684 aa9.79□□□□□ -0.84
TMEM260-209ENST00000556079 ARHGAP31Q2M1Z3 1444 aa9.79□□□□□ -0.84
TMEM260-209ENST00000556079 MED1Q15648 1581 aaPredicted RBP9.79□□□□□ -0.84
TMEM260-209ENST00000556079 KANK1Q14678 1352 aa9.78□□□□□ -0.84
TMEM260-209ENST00000556079 CPS1P31327 1500 aa9.78□□□□□ -0.84
TMEM260-209ENST00000556079 IQGAP1P46940 1657 aa9.78□□□□□ -0.84
TMEM260-209ENST00000556079 IQGAP3Q86VI3 1631 aa9.78□□□□□ -0.84
TMEM260-209ENST00000556079 ROCK1Q13464 1354 aa9.77□□□□□ -0.84
TMEM260-209ENST00000556079 NPHP4O75161 1426 aaPredicted RBP9.77□□□□□ -0.85
TMEM260-209ENST00000556079 THEMISQ8N1K5 641 aaPredicted RBP9.77□□□□□ -0.85
TMEM260-209ENST00000556079 ALKQ9UM73 1620 aa9.77□□□□□ -0.85
TMEM260-209ENST00000556079 NOS1P29475 1434 aa9.76□□□□□ -0.85
TMEM260-209ENST00000556079 LTKP29376 864 aa9.76□□□□□ -0.85
TMEM260-209ENST00000556079 IDI1Q13907 227 aa9.75□□□□□ -0.85
TMEM260-209ENST00000556079 ADGRB3O60242 1522 aa9.75□□□□□ -0.85
TMEM260-209ENST00000556079 NAIPQ13075 1403 aa9.74□□□□□ -0.85
TMEM260-209ENST00000556079 MED14O60244 1454 aa9.74□□□□□ -0.85
TMEM260-209ENST00000556079 ARHGAP23Q9P227 1491 aa9.74□□□□□ -0.85
TMEM260-209ENST00000556079 NUP155O75694 1391 aa9.74□□□□□ -0.85
TMEM260-209ENST00000556079 SCAF11Q99590 1463 aaKnown RBP9.73□□□□□ -0.85
TMEM260-209ENST00000556079 SLIT1O75093 1534 aa9.73□□□□□ -0.85
TMEM260-209ENST00000556079 LRRC7Q96NW7 1537 aa9.72□□□□□ -0.85
TMEM260-209ENST00000556079 TMEM131LA2VDJ0 1609 aa9.72□□□□□ -0.85
TMEM260-209ENST00000556079 NUTM2DQ5VT03 806 aaPredicted RBP9.72□□□□□ -0.85
TMEM260-209ENST00000556079 SPHKAPQ2M3C7 1700 aa9.71□□□□□ -0.85
TMEM260-209ENST00000556079 XIRP1Q702N8 1843 aaKnown RBP9.71□□□□□ -0.85
TMEM260-209ENST00000556079 TMEM2Q9UHN6 1383 aa9.71□□□□□ -0.86
TMEM260-209ENST00000556079 TXNDC2Q86VQ3 553 aa9.7□□□□□ -0.86
TMEM260-209ENST00000556079 CLTCL1P53675 1640 aa9.7□□□□□ -0.86
TMEM260-209ENST00000556079 CHGAP10645 457 aaKnown RBP9.69□□□□□ -0.86
TMEM260-209ENST00000556079 KDM5AP29375 1690 aaKnown RBP9.69□□□□□ -0.86
TMEM260-209ENST00000556079 RPRD2Q5VT52 1461 aaKnown RBP9.69□□□□□ -0.86
TMEM260-209ENST00000556079 RBM33Q96EV2 1170 aaKnown RBP9.69□□□□□ -0.86
TMEM260-209ENST00000556079 STAG3Q9UJ98 1225 aa9.69□□□□□ -0.86
TMEM260-209ENST00000556079 ZBTB12Q9Y330 459 aaPredicted RBP9.69□□□□□ -0.86
TMEM260-209ENST00000556079 HFM1A2PYH4 1435 aa9.68□□□□□ -0.86
TMEM260-209ENST00000556079 ZFYVE9O95405 1425 aa9.68□□□□□ -0.86
TMEM260-209ENST00000556079 SLC26A8Q96RN1 970 aa9.68□□□□□ -0.86
TMEM260-209ENST00000556079 RBM42Q9BTD8 480 aaKnown RBP9.68□□□□□ -0.86
TMEM260-209ENST00000556079 RGS17Q9UGC6 210 aaPredicted RBP9.68□□□□□ -0.86
TMEM260-209ENST00000556079 RIMS2Q9UQ26 1411 aa9.67□□□□□ -0.86
TMEM260-209ENST00000556079 TRIM52Q96A61 297 aa9.66□□□□□ -0.86
TMEM260-209ENST00000556079 NRXN3Q9Y4C0 1643 aa9.64□□□□□ -0.87
TMEM260-209ENST00000556079 TRPM2O94759 1503 aa9.63□□□□□ -0.87
TMEM260-209ENST00000556079 SLC52A1Q9NWF4 448 aa9.63□□□□□ -0.87
TMEM260-209ENST00000556079 EID1Q9Y6B2 187 aa9.63□□□□□ -0.87
TMEM260-209ENST00000556079 POTEAQ6S8J7 498 aa9.62□□□□□ -0.87
TMEM260-209ENST00000556079 BCANQ96GW7 911 aa9.62□□□□□ -0.87
TMEM260-209ENST00000556079 ADAMTS13Q76LX8 1427 aa9.62□□□□□ -0.87
TMEM260-209ENST00000556079 NWD1Q149M9 1564 aa9.62□□□□□ -0.87
TMEM260-209ENST00000556079 TMEM94Q12767 1356 aa9.62□□□□□ -0.87
TMEM260-209ENST00000556079 NEXMIFQ5QGS0 1516 aa9.61□□□□□ -0.87
TMEM260-209ENST00000556079 CHD2O14647 1828 aaKnown RBP9.61□□□□□ -0.87
TMEM260-209ENST00000556079 KIF1BO60333 1816 aa9.61□□□□□ -0.87
TMEM260-209ENST00000556079 PPP1R15AO75807 674 aaPredicted RBP9.61□□□□□ -0.87
TMEM260-209ENST00000556079 PLEKHG1Q9ULL1 1385 aa9.61□□□□□ -0.87
TMEM260-209ENST00000556079 FAM135BQ49AJ0 1406 aa9.6□□□□□ -0.87
TMEM260-209ENST00000556079 PTPRUQ92729 1446 aa9.6□□□□□ -0.87
TMEM260-209ENST00000556079 KCNA6P17658 529 aa9.59□□□□□ -0.87
TMEM260-209ENST00000556079 ZNF326Q5BKZ1 582 aaKnown RBP9.59□□□□□ -0.87
TMEM260-209ENST00000556079 PROSER2Q86WR7 435 aaPredicted RBP9.59□□□□□ -0.87
TMEM260-209ENST00000556079 RAB3GAP2Q9H2M9 1393 aa9.58□□□□□ -0.88
TMEM260-209ENST00000556079 PPLO60437 1756 aa9.58□□□□□ -0.88
TMEM260-209ENST00000556079 SETD5Q9C0A6 1442 aa9.57□□□□□ -0.88
TMEM260-209ENST00000556079 SETD1AO15047 1707 aaKnown RBP9.57□□□□□ -0.88
TMEM260-209ENST00000556079 ROBO1Q9Y6N7 1651 aa9.56□□□□□ -0.88
TMEM260-209ENST00000556079 METP08581 1390 aa9.56□□□□□ -0.88
TMEM260-209ENST00000556079 MPHOSPH9Q99550 1183 aa9.56□□□□□ -0.88
TMEM260-209ENST00000556079 SRCAPQ6ZRS2 3230 aa9.56□□□□□ -0.88
TMEM260-209ENST00000556079 XRN1Q8IZH2 1706 aaKnown RBP9.56□□□□□ -0.88
TMEM260-209ENST00000556079 SETBP1Q9Y6X0 1596 aa9.55□□□□□ -0.88
TMEM260-209ENST00000556079 NKTRP30414 1462 aaKnown RBP9.55□□□□□ -0.88
TMEM260-209ENST00000556079 IFT172Q9UG01 1749 aa9.55□□□□□ -0.88
TMEM260-209ENST00000556079 DIP2AQ14689 1571 aa9.54□□□□□ -0.88
TMEM260-209ENST00000556079 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.53□□□□□ -0.88
TMEM260-209ENST00000556079 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.53□□□□□ -0.88
TMEM260-209ENST00000556079 SLAIN2Q9P270 581 aa9.53□□□□□ -0.88
TMEM260-209ENST00000556079 TBX22Q9Y458 520 aa9.53□□□□□ -0.88
TMEM260-209ENST00000556079 NALCNQ8IZF0 1738 aa9.53□□□□□ -0.88
TMEM260-209ENST00000556079 MSH6P52701 1360 aa9.52□□□□□ -0.88
TMEM260-209ENST00000556079 RGL3Q3MIN7 710 aa9.52□□□□□ -0.89
TMEM260-209ENST00000556079 SPATA31E1Q6ZUB1 1445 aa9.52□□□□□ -0.89
TMEM260-209ENST00000556079 ADGRF5Q8IZF2 1346 aa9.52□□□□□ -0.89
TMEM260-209ENST00000556079 ASXL1Q8IXJ9 1541 aa9.51□□□□□ -0.89
TMEM260-209ENST00000556079 AMOTL2Q9Y2J4 779 aa9.51□□□□□ -0.89
TMEM260-209ENST00000556079 JCADQ9P266 1359 aa9.5□□□□□ -0.89
TMEM260-209ENST00000556079 CCDC144AA2RUR9 1427 aa9.5□□□□□ -0.89
TMEM260-209ENST00000556079 MKRN4PQ13434 485 aaPredicted RBP9.5□□□□□ -0.89
TMEM260-209ENST00000556079 POTEHQ6S545 545 aa9.5□□□□□ -0.89
TMEM260-209ENST00000556079 PHLPP1O60346 1717 aa9.5□□□□□ -0.89
TMEM260-209ENST00000556079 C14orf37Q86TY3 774 aa9.49□□□□□ -0.89
TMEM260-209ENST00000556079 AKT1S1Q96B36 256 aa9.49□□□□□ -0.89
TMEM260-209ENST00000556079 LRP6O75581 1613 aa9.49□□□□□ -0.89
TMEM260-209ENST00000556079 ROBO2Q9HCK4 1378 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms